RNA–Protein interactions for RNA: ENST00000470588.1

SMARCD3-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 1,755 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-206ENST00000470588 PRR3P79522 188 aaKnown RBP11.27□□□□□ -0.61
SMARCD3-206ENST00000470588 CAMK2N2Q96S95 79 aa11.27□□□□□ -0.61
SMARCD3-206ENST00000470588 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
SMARCD3-206ENST00000470588 C15orf56Q8N910 161 aa11.26□□□□□ -0.61
SMARCD3-206ENST00000470588 NUPR2A6NF83 97 aa11.25□□□□□ -0.61
SMARCD3-206ENST00000470588 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
SMARCD3-206ENST00000470588 TEX49A0A1B0GTD5 131 aa11.24□□□□□ -0.61
SMARCD3-206ENST00000470588 SIGMAR1Q99720 223 aa11.23□□□□□ -0.61
SMARCD3-206ENST00000470588 UPK3BQ9BT76 320 aa11.23□□□□□ -0.61
SMARCD3-206ENST00000470588 DNHD1Q96M86 4753 aa11.23□□□□□ -0.61
SMARCD3-206ENST00000470588 Q8NDZ9 215 aa11.22□□□□□ -0.61
SMARCD3-206ENST00000470588 NCR3O14931 201 aa11.21□□□□□ -0.61
SMARCD3-206ENST00000470588 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.61
SMARCD3-206ENST00000470588 Q6ZRU5 148 aa11.21□□□□□ -0.61
SMARCD3-206ENST00000470588 A0A087WYN8 130 aa11.21□□□□□ -0.62
SMARCD3-206ENST00000470588 A0A1B0GX51 115 aa11.21□□□□□ -0.62
SMARCD3-206ENST00000470588 DNAL4O96015 105 aa11.21□□□□□ -0.62
SMARCD3-206ENST00000470588 RMI2Q96E14 147 aa11.21□□□□□ -0.62
SMARCD3-206ENST00000470588 Q9HAA7 133 aa11.21□□□□□ -0.62
SMARCD3-206ENST00000470588 UBE2DNLQ8IWF7 75 aa11.2□□□□□ -0.62
SMARCD3-206ENST00000470588 CDIP1Q9H305 208 aa11.2□□□□□ -0.62
SMARCD3-206ENST00000470588 COL7A1Q02388 2944 aa11.19□□□□□ -0.62
SMARCD3-206ENST00000470588 APLNQ9ULZ1 77 aa11.18□□□□□ -0.62
SMARCD3-206ENST00000470588 SYCNQ0VAF6 134 aa11.18□□□□□ -0.62
SMARCD3-206ENST00000470588 STAB2Q8WWQ8 2551 aa11.17□□□□□ -0.62
SMARCD3-206ENST00000470588 NDUFC2-KCTD14E9PQ53 114 aa11.17□□□□□ -0.62
SMARCD3-206ENST00000470588 LECT2O14960 151 aa11.17□□□□□ -0.62
SMARCD3-206ENST00000470588 IGLV6-57P01721 117 aa11.17□□□□□ -0.62
SMARCD3-206ENST00000470588 PCP4P48539 62 aa11.16□□□□□ -0.62
SMARCD3-206ENST00000470588 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
SMARCD3-206ENST00000470588 C22orf24Q9Y442 160 aa11.16□□□□□ -0.62
SMARCD3-206ENST00000470588 SNCGO76070 127 aa11.15□□□□□ -0.62
SMARCD3-206ENST00000470588 RPL18AQ02543 176 aaKnown RBP11.15□□□□□ -0.62
SMARCD3-206ENST00000470588 LINC00167Q96N53 147 aa11.14□□□□□ -0.63
SMARCD3-206ENST00000470588 MEGF8Q7Z7M0 2845 aa11.14□□□□□ -0.63
SMARCD3-206ENST00000470588 C6orf99Q4VX62 202 aa11.13□□□□□ -0.63
SMARCD3-206ENST00000470588 Q8N814 137 aa11.13□□□□□ -0.63
SMARCD3-206ENST00000470588 VPREB1P12018 145 aa11.12□□□□□ -0.63
SMARCD3-206ENST00000470588 FAM240AA0A1B0GVK7 77 aa11.11□□□□□ -0.63
SMARCD3-206ENST00000470588 USP17L23D6RBM5 183 aa11.11□□□□□ -0.63
SMARCD3-206ENST00000470588 M0R378 163 aa11.11□□□□□ -0.63
SMARCD3-206ENST00000470588 ORMDL1Q9P0S3 153 aa11.11□□□□□ -0.63
SMARCD3-206ENST00000470588 TLX1NBP0CAT3 122 aa11.1□□□□□ -0.63
SMARCD3-206ENST00000470588 INAFM2P0DMQ5 153 aa11.1□□□□□ -0.63
SMARCD3-206ENST00000470588 SCGB1A1P11684 91 aa11.1□□□□□ -0.63
SMARCD3-206ENST00000470588 LINC00575Q6W349 94 aa11.1□□□□□ -0.63
SMARCD3-206ENST00000470588 Q6ZRP5 223 aa11.1□□□□□ -0.63
SMARCD3-206ENST00000470588 TRBV10-3A0A0K0K1G6 114 aa11.09□□□□□ -0.63
SMARCD3-206ENST00000470588 ACYP1P07311 99 aa11.09□□□□□ -0.63
SMARCD3-206ENST00000470588 GAGE2EQ4V326 116 aa11.09□□□□□ -0.63
SMARCD3-206ENST00000470588 GAGE2DQ9UEU5 116 aa11.09□□□□□ -0.63
SMARCD3-206ENST00000470588 SLPIP03973 132 aa11.08□□□□□ -0.64
SMARCD3-206ENST00000470588 CASC10Q5T4H9 136 aa11.08□□□□□ -0.64
SMARCD3-206ENST00000470588 PRKDCP78527 4128 aaKnown RBP11.07□□□□□ -0.64
SMARCD3-206ENST00000470588 TRAV23DV6A0A075B6W5 121 aa11.07□□□□□ -0.64
SMARCD3-206ENST00000470588 XGP55808 180 aa11.07□□□□□ -0.64
SMARCD3-206ENST00000470588 OBSCN-AS1Q96MR7 158 aa11.07□□□□□ -0.64
SMARCD3-206ENST00000470588 DYNC2H1Q8NCM8 4307 aaKnown RBP11.06□□□□□ -0.64
SMARCD3-206ENST00000470588 TRBV7-6A0A0J9YX20 115 aa11.05□□□□□ -0.64
SMARCD3-206ENST00000470588 TMEM256-PLSCR3K7ERE1 68 aa11.05□□□□□ -0.64
SMARCD3-206ENST00000470588 DIRC1Q969H9 104 aa11.05□□□□□ -0.64
SMARCD3-206ENST00000470588 hADV29S1A0JD25 119 aa11.05□□□□□ -0.64
SMARCD3-206ENST00000470588 MT-ATP8P03928 68 aa11.05□□□□□ -0.64
SMARCD3-206ENST00000470588 TTC32Q5I0X7 151 aa11.05□□□□□ -0.64
SMARCD3-206ENST00000470588 PLA2G2DQ9UNK4 145 aa11.05□□□□□ -0.64
SMARCD3-206ENST00000470588 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
SMARCD3-206ENST00000470588 ZNF73O43830 326 aaPredicted RBP11.03□□□□□ -0.64
SMARCD3-206ENST00000470588 H3BQ85 93 aa11.02□□□□□ -0.65
SMARCD3-206ENST00000470588 COX7BP24311 80 aa11.01□□□□□ -0.65
SMARCD3-206ENST00000470588 JMJD7-PLA2G4BH0Y9G9 81 aa11□□□□□ -0.65
SMARCD3-206ENST00000470588 NKAPP1Q8N9T2 125 aa11□□□□□ -0.65
SMARCD3-206ENST00000470588 KRTAP1-5Q9BYS1 174 aa10.99□□□□□ -0.65
SMARCD3-206ENST00000470588 PSCAO43653 123 aa10.98□□□□□ -0.65
SMARCD3-206ENST00000470588 ELOF1P60002 83 aaKnown RBP10.98□□□□□ -0.65
SMARCD3-206ENST00000470588 WWC2-AS2Q96NR7 200 aa10.98□□□□□ -0.65
SMARCD3-206ENST00000470588 DNAH7Q8WXX0 4024 aa10.98□□□□□ -0.65
SMARCD3-206ENST00000470588 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
SMARCD3-206ENST00000470588 LOC107984640A0A0U1RRK4 108 aa10.98□□□□□ -0.65
SMARCD3-206ENST00000470588 NBDYA0A0U1RRE5 68 aa10.97□□□□□ -0.65
SMARCD3-206ENST00000470588 SERTAD4-AS1Q5TG53 156 aa10.97□□□□□ -0.65
SMARCD3-206ENST00000470588 C14orf132Q9NPU4 83 aa10.97□□□□□ -0.65
SMARCD3-206ENST00000470588 C21orf62-AS1Q17RA5 79 aa10.96□□□□□ -0.65
SMARCD3-206ENST00000470588 GAGE2AQ6NT46 116 aa10.96□□□□□ -0.65
SMARCD3-206ENST00000470588 GHRHP01286 108 aa10.95□□□□□ -0.66
SMARCD3-206ENST00000470588 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.95□□□□□ -0.66
SMARCD3-206ENST00000470588 KCNQ1DNQ9H478 68 aa10.95□□□□□ -0.66
SMARCD3-206ENST00000470588 C7orf33Q8WU49 177 aa10.95□□□□□ -0.66
SMARCD3-206ENST00000470588 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
SMARCD3-206ENST00000470588 C14orf177Q52M58 125 aa10.94□□□□□ -0.66
SMARCD3-206ENST00000470588 SDIM1Q6ZPB5 146 aa10.94□□□□□ -0.66
SMARCD3-206ENST00000470588 Q6Q795 121 aa10.93□□□□□ -0.66
SMARCD3-206ENST00000470588 Q6ZQY7 126 aa10.93□□□□□ -0.66
SMARCD3-206ENST00000470588 LINC00528Q8N1L1 170 aa10.93□□□□□ -0.66
SMARCD3-206ENST00000470588 FBN3Q75N90 2809 aa10.93□□□□□ -0.66
SMARCD3-206ENST00000470588 CSMD3Q7Z407 3707 aa10.92□□□□□ -0.66
SMARCD3-206ENST00000470588 CCKP06307 115 aa10.92□□□□□ -0.66
SMARCD3-206ENST00000470588 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
SMARCD3-206ENST00000470588 LINC00643Q86TS7 51 aa10.91□□□□□ -0.66
SMARCD3-206ENST00000470588 DNAH1Q9P2D7 4330 aa10.91□□□□□ -0.66
SMARCD3-206ENST00000470588 PLECQ15149 4684 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms