RNA–Protein interactions for RNA: ENST00000470278.5

CDC42SE1-203, Transcript of CDC42 small effector 1, humanhuman

TSL 5

Gene CDC42SE1, Length 939 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-203ENST00000470278 SND1-IT1Q9HBX3 110 aa9.35□□□□□ -0.91
CDC42SE1-203ENST00000470278 FAT3Q8TDW7 4589 aa9.34□□□□□ -0.91
CDC42SE1-203ENST00000470278 PKHD1L1Q86WI1 4243 aa9.34□□□□□ -0.91
CDC42SE1-203ENST00000470278 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
CDC42SE1-203ENST00000470278 LINC00158P58513 81 aa9.34□□□□□ -0.91
CDC42SE1-203ENST00000470278 ANKRD39Q53RE8 183 aa9.34□□□□□ -0.91
CDC42SE1-203ENST00000470278 M0QXV9 152 aa9.33□□□□□ -0.92
CDC42SE1-203ENST00000470278 PLA2G1BP04054 148 aaKnown RBP9.33□□□□□ -0.92
CDC42SE1-203ENST00000470278 SERTAD4-AS1Q5TG53 156 aa9.33□□□□□ -0.92
CDC42SE1-203ENST00000470278 IGLV5-37A0A075B6J1 123 aa9.32□□□□□ -0.92
CDC42SE1-203ENST00000470278 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
CDC42SE1-203ENST00000470278 SCGB1D1O95968 90 aa9.32□□□□□ -0.92
CDC42SE1-203ENST00000470278 KRTAP10-4P60372 401 aaPredicted RBP9.32□□□□□ -0.92
CDC42SE1-203ENST00000470278 TP73-AS1Q9UF72 201 aa9.32□□□□□ -0.92
CDC42SE1-203ENST00000470278 ZNF815PA8K554 130 aa9.31□□□□□ -0.92
CDC42SE1-203ENST00000470278 RPL37AP61513 92 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-203ENST00000470278 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
CDC42SE1-203ENST00000470278 A0A0U1RRA0 63 aa9.3□□□□□ -0.92
CDC42SE1-203ENST00000470278 HSBP1L1C9JCN9 74 aa9.3□□□□□ -0.92
CDC42SE1-203ENST00000470278 TIMM17BO60830 172 aa9.3□□□□□ -0.92
CDC42SE1-203ENST00000470278 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-203ENST00000470278 LOC107984156A0A0G2JMH3 177 aa9.29□□□□□ -0.92
CDC42SE1-203ENST00000470278 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
CDC42SE1-203ENST00000470278 ARL17AQ8IVW1 177 aa9.29□□□□□ -0.92
CDC42SE1-203ENST00000470278 TTTY13Q9BZ97 58 aa9.29□□□□□ -0.92
CDC42SE1-203ENST00000470278 C22orf24Q9Y442 160 aa9.29□□□□□ -0.92
CDC42SE1-203ENST00000470278 VPREB1P12018 145 aa9.28□□□□□ -0.92
CDC42SE1-203ENST00000470278 PRR3P79522 188 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-203ENST00000470278 RPL24P83731 157 aaKnown RBP9.28□□□□□ -0.92
CDC42SE1-203ENST00000470278 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
CDC42SE1-203ENST00000470278 MRPL55Q7Z7F7 128 aaKnown RBP9.27□□□□□ -0.93
CDC42SE1-203ENST00000470278 LITAFQ99732 161 aa9.27□□□□□ -0.93
CDC42SE1-203ENST00000470278 PCP2Q8IVA1 136 aa9.26□□□□□ -0.93
CDC42SE1-203ENST00000470278 DAND5Q8N907 189 aa9.26□□□□□ -0.93
CDC42SE1-203ENST00000470278 NKAPP1Q8N9T2 125 aa9.26□□□□□ -0.93
CDC42SE1-203ENST00000470278 Q8NDZ9 215 aa9.26□□□□□ -0.93
CDC42SE1-203ENST00000470278 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
CDC42SE1-203ENST00000470278 UBR4Q5T4S7 5183 aa9.25□□□□□ -0.93
CDC42SE1-203ENST00000470278 UBE2BP63146 152 aa9.24□□□□□ -0.93
CDC42SE1-203ENST00000470278 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
CDC42SE1-203ENST00000470278 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
CDC42SE1-203ENST00000470278 MIEN1Q9BRT3 115 aa9.24□□□□□ -0.93
CDC42SE1-203ENST00000470278 PSORS1C2Q9UIG4 136 aa9.24□□□□□ -0.93
CDC42SE1-203ENST00000470278 TMEM238C9JI98 176 aa9.23□□□□□ -0.93
CDC42SE1-203ENST00000470278 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
CDC42SE1-203ENST00000470278 PYY3Q5JQD4 70 aa9.22□□□□□ -0.93
CDC42SE1-203ENST00000470278 LINC00167Q96N53 147 aa9.22□□□□□ -0.93
CDC42SE1-203ENST00000470278 NDUFC2O95298 119 aa9.21□□□□□ -0.94
CDC42SE1-203ENST00000470278 SOSTDC1Q6X4U4 206 aa9.21□□□□□ -0.94
CDC42SE1-203ENST00000470278 VAMP8Q9BV40 100 aa9.21□□□□□ -0.94
CDC42SE1-203ENST00000470278 SPANXDQ9BXN6 97 aa9.21□□□□□ -0.94
CDC42SE1-203ENST00000470278 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.94
CDC42SE1-203ENST00000470278 SPANXCQ9NY87 97 aa9.21□□□□□ -0.94
CDC42SE1-203ENST00000470278 KRTAP29-1A8MX34 341 aaPredicted RBP9.2□□□□□ -0.94
CDC42SE1-203ENST00000470278 Q6ZVH6 145 aa9.2□□□□□ -0.94
CDC42SE1-203ENST00000470278 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
CDC42SE1-203ENST00000470278 M0R378 163 aa9.19□□□□□ -0.94
CDC42SE1-203ENST00000470278 DLEU1O43261 78 aa9.19□□□□□ -0.94
CDC42SE1-203ENST00000470278 COX8AP10176 69 aa9.19□□□□□ -0.94
CDC42SE1-203ENST00000470278 SPANXB1Q9NS25 103 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-203ENST00000470278 IGLV1-50A0A075B6I6 118 aa9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 TRBV10-2A0A0K0K1G8 114 aa9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 GAGE10A6NGK3 116 aa9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 EIF4EBP3O60516 100 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 HNRNPA3P51991 378 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 SPATA45Q537H7 98 aa9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 C1orf137Q5JT78 98 aa9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 COPS9Q8WXC6 57 aa9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 PAM16Q9Y3D7 125 aa9.18□□□□□ -0.94
CDC42SE1-203ENST00000470278 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
CDC42SE1-203ENST00000470278 NPC2P61916 151 aa9.17□□□□□ -0.94
CDC42SE1-203ENST00000470278 IGKV2-28A0A075B6P5 120 aa9.16□□□□□ -0.94
CDC42SE1-203ENST00000470278 J3QL48 77 aa9.16□□□□□ -0.94
CDC42SE1-203ENST00000470278 NCR3O14931 201 aa9.16□□□□□ -0.94
CDC42SE1-203ENST00000470278 IGKV2D-28P01615 120 aa9.16□□□□□ -0.94
CDC42SE1-203ENST00000470278 IGLV7-43P04211 117 aa9.16□□□□□ -0.94
CDC42SE1-203ENST00000470278 IFITM1P13164 125 aa9.16□□□□□ -0.94
CDC42SE1-203ENST00000470278 BCE1O60756 84 aa9.14□□□□□ -0.95
CDC42SE1-203ENST00000470278 SRSF9Q13242 221 aaKnown RBP eCLIP9.14□□□□□ -0.95
CDC42SE1-203ENST00000470278 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
CDC42SE1-203ENST00000470278 TRBV10-3A0A0K0K1G6 114 aa9.12□□□□□ -0.95
CDC42SE1-203ENST00000470278 PRYO14603 147 aa9.12□□□□□ -0.95
CDC42SE1-203ENST00000470278 IGLV6-57P01721 117 aa9.12□□□□□ -0.95
CDC42SE1-203ENST00000470278 REG3GQ6UW15 175 aa9.12□□□□□ -0.95
CDC42SE1-203ENST00000470278 C14orf144Q96I85 54 aa9.12□□□□□ -0.95
CDC42SE1-203ENST00000470278 TMEM126AQ9H061 195 aa9.12□□□□□ -0.95
CDC42SE1-203ENST00000470278 KCNQ1DNQ9H478 68 aa9.12□□□□□ -0.95
CDC42SE1-203ENST00000470278 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
CDC42SE1-203ENST00000470278 ZNF861PO60384 105 aa9.1□□□□□ -0.95
CDC42SE1-203ENST00000470278 DDTP30046 118 aa9.1□□□□□ -0.95
CDC42SE1-203ENST00000470278 SPRR1AP35321 89 aa9.1□□□□□ -0.95
CDC42SE1-203ENST00000470278 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
CDC42SE1-203ENST00000470278 MUSTN1Q8IVN3 82 aa9.1□□□□□ -0.95
CDC42SE1-203ENST00000470278 LINC00518Q8N0U6 118 aa9.1□□□□□ -0.95
CDC42SE1-203ENST00000470278 HIGD1BQ9P298 99 aa9.1□□□□□ -0.95
CDC42SE1-203ENST00000470278 S100A12P80511 92 aa9.09□□□□□ -0.95
CDC42SE1-203ENST00000470278 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
CDC42SE1-203ENST00000470278 S100A7L2Q5SY68 101 aa9.08□□□□□ -0.96
CDC42SE1-203ENST00000470278 LINC00337Q8N6G1 96 aa9.08□□□□□ -0.96
CDC42SE1-203ENST00000470278 DIRC1Q969H9 104 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 147.8 ms