RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 ATP6V1G2-DDX39BF2Z307 99 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 F6UZH7 168 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 GEMIN2O14893 280 aaKnown RBP1.41□□□□□ -2.18
LSM5-209ENST00000468872 S100PP25815 95 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 LINC01545Q5VT33 79 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 PP6455Q8WZ26 134 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 ODF3Q96PU9 254 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 AGPAT4-IT1Q9H0P7 198 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 TAS2R8Q9NYW2 309 aa1.41□□□□□ -2.18
LSM5-209ENST00000468872 CXorf51AA0A1B0GTR3 108 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 BBIP1A8MTZ0 92 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 JMJD7-PLA2G4BH0Y9G9 81 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 CORTO00230 105 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 PPYP01298 95 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 IGKCP01834 107 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 HIST1H1DP16402 221 aaKnown RBP1.4□□□□□ -2.19
LSM5-209ENST00000468872 WHAMMP3Q1A5X7 153 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 DEFB110Q30KQ9 67 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 IDO2Q6ZQW0 420 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 KCNRGQ8N5I3 272 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 DYNLRB2Q8TF09 96 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 C12orf57Q99622 126 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 PDCD10Q9BUL8 212 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 SEC11CQ9BY50 192 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 GNG8Q9UK08 70 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 C22orf24Q9Y442 160 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 ANKRD36A6QL64 1941 aa1.4□□□□□ -2.19
LSM5-209ENST00000468872 NINQ8N4C6 2090 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 TRAV2A0A0B4J234 112 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 IL7P13232 177 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 RHOHQ15669 191 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 LYPD5Q6UWN5 251 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 LINC00322Q6ZN03 302 aaPredicted RBP1.39□□□□□ -2.19
LSM5-209ENST00000468872 LINC00299Q6ZSB3 139 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 DEFB108BQ8NET1 73 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 C14orf144Q96I85 54 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 PSMG3Q9BT73 122 aaPredicted RBP1.39□□□□□ -2.19
LSM5-209ENST00000468872 RERGLQ9H628 205 aa1.39□□□□□ -2.19
LSM5-209ENST00000468872 BOKQ9UMX3 212 aaPredicted RBP1.39□□□□□ -2.19
LSM5-209ENST00000468872 TMEM30CPA0ZSE6 113 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 DNAL4O96015 105 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 IGHV3-30P01768 117 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 TFF1P04155 84 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 AKAIN1P0CW23 69 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 IGHV3-30-5P0DP03 117 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 SLC25A6P12236 298 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 PDE6GP18545 87 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 C3orf62Q6ZUJ4 267 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 OBSCN-AS1Q96MR7 158 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 NDUFA12Q9UI09 145 aa1.38□□□□□ -2.19
LSM5-209ENST00000468872 PIRTP0C851 137 aa1.37□□□□□ -2.19
LSM5-209ENST00000468872 KRTAP19-6Q3LI70 58 aa1.37□□□□□ -2.19
LSM5-209ENST00000468872 OR2T2Q6IF00 324 aa1.37□□□□□ -2.19
LSM5-209ENST00000468872 SERP1Q9Y6X1 66 aa1.37□□□□□ -2.19
LSM5-209ENST00000468872 TRBV6-7A0A0A0MS04 114 aa1.36□□□□□ -2.19
LSM5-209ENST00000468872 POLR2JP52435 117 aaKnown RBP1.36□□□□□ -2.19
LSM5-209ENST00000468872 GDF5OSQ5U4N7 250 aa1.36□□□□□ -2.19
LSM5-209ENST00000468872 Q6AWC8 147 aa1.36□□□□□ -2.19
LSM5-209ENST00000468872 PPDPFLQ8WWR9 84 aa1.36□□□□□ -2.19
LSM5-209ENST00000468872 WFDC10AQ9H1F0 79 aa1.36□□□□□ -2.19
LSM5-209ENST00000468872 TMEM14CQ9P0S9 112 aa1.36□□□□□ -2.19
LSM5-209ENST00000468872 MT1HP80294 61 aa1.35□□□□□ -2.19
LSM5-209ENST00000468872 NAA60Q9H7X0 242 aa1.35□□□□□ -2.19
LSM5-209ENST00000468872 TMEM242Q9NWH2 141 aa1.35□□□□□ -2.19
LSM5-209ENST00000468872 COA4Q9NYJ1 87 aa1.35□□□□□ -2.19
LSM5-209ENST00000468872 MRPL36Q9P0J6 103 aaKnown RBP1.35□□□□□ -2.19
LSM5-209ENST00000468872 APLNQ9ULZ1 77 aa1.35□□□□□ -2.19
LSM5-209ENST00000468872 TCHHQ07283 1943 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 MCRIP1C9JLW8 97 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 IL5P05113 134 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 GYPBP06028 91 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 GNG4P50150 75 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 SPANXN1Q5VSR9 72 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 Q8N8P6 123 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 DMAC1Q96GE9 116 aa1.34□□□□□ -2.19
LSM5-209ENST00000468872 TRAV23DV6A0A075B6W5 121 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 IGLV3-32A0A0A0MS00 114 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 TRBV10-1A0A0K0K1A3 114 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 NBDYA0A0U1RRE5 68 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 NDUFB6O95139 128 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 SPRR2EP22531 72 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 SPRR2BP35325 72 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 SPRR2AP35326 72 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 RPL37AP61513 92 aaKnown RBP1.33□□□□□ -2.2
LSM5-209ENST00000468872 MRPS10P82664 201 aaKnown RBP1.33□□□□□ -2.2
LSM5-209ENST00000468872 IQCJQ1A5X6 159 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 Q56UQ5 140 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 SLC48A1Q6P1K1 146 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 UNQ5815/PRO19632Q6UWF5 114 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 PLPP5Q8NEB5 264 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 SPTSSAQ969W0 71 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 TMEM141Q96I45 108 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 MRPL57Q9BQC6 102 aaKnown RBP1.33□□□□□ -2.2
LSM5-209ENST00000468872 TCEAL7Q9BRU2 100 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 ATG5Q9H1Y0 275 aa1.33□□□□□ -2.2
LSM5-209ENST00000468872 SNAPC5O75971 98 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 RBP2P50120 134 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 NPC2P61916 151 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 PPP3R1P63098 170 aa1.32□□□□□ -2.2
LSM5-209ENST00000468872 CATR1Q13166 79 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms