RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RPL24P83731 157 aaKnown RBP6.3□□□□□ -1.4
UBR4-210ENST00000466969 ATP11AUNQ6ZP68 121 aa6.3□□□□□ -1.4
UBR4-210ENST00000466969 SLC51BQ86UW2 128 aa6.3□□□□□ -1.4
UBR4-210ENST00000466969 OSTCQ9NRP0 149 aa6.3□□□□□ -1.4
UBR4-210ENST00000466969 VPREB1P12018 145 aa6.29□□□□□ -1.4
UBR4-210ENST00000466969 RAB5AP20339 215 aa6.29□□□□□ -1.4
UBR4-210ENST00000466969 CEBPGP53567 150 aa6.29□□□□□ -1.4
UBR4-210ENST00000466969 EIF5A2Q9GZV4 153 aaKnown RBP6.29□□□□□ -1.4
UBR4-210ENST00000466969 NAT8BQ9UHF3 227 aa6.29□□□□□ -1.4
UBR4-210ENST00000466969 A0A1B0GW15 77 aa6.28□□□□□ -1.4
UBR4-210ENST00000466969 CHTOPQ9Y3Y2 248 aaKnown RBP6.28□□□□□ -1.4
UBR4-210ENST00000466969 D6R8Y8 96 aa6.27□□□□□ -1.41
UBR4-210ENST00000466969 HRCT1Q6UXD1 115 aa6.27□□□□□ -1.41
UBR4-210ENST00000466969 SMIM7Q9BQ49 75 aa6.27□□□□□ -1.41
UBR4-210ENST00000466969 NPYP01303 97 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 PPBPP02775 128 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 HERVK_113P63121 156 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 SEC11AP67812 179 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 KIAA1644Q3SXP7 199 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 C6orf99Q4VX62 202 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 VCX2Q9H322 139 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 V9GYV3 84 aa6.26□□□□□ -1.41
UBR4-210ENST00000466969 S100A8P05109 93 aa6.25□□□□□ -1.41
UBR4-210ENST00000466969 FAM236DA0A1B0GTK5 79 aa6.24□□□□□ -1.41
UBR4-210ENST00000466969 F8W036 122 aa6.24□□□□□ -1.41
UBR4-210ENST00000466969 FAM236CP0DP71 79 aa6.24□□□□□ -1.41
UBR4-210ENST00000466969 RAB14P61106 215 aa6.24□□□□□ -1.41
UBR4-210ENST00000466969 FAM74A3Q4VXF1 159 aa6.24□□□□□ -1.41
UBR4-210ENST00000466969 AMELXQ99217 191 aa6.24□□□□□ -1.41
UBR4-210ENST00000466969 CYSLTR1Q9Y271 337 aa6.24□□□□□ -1.41
UBR4-210ENST00000466969 C2orf66Q6UXQ4 117 aa6.23□□□□□ -1.41
UBR4-210ENST00000466969 A6NN06 94 aa6.22□□□□□ -1.41
UBR4-210ENST00000466969 PRSS47A8MTI9 375 aa6.22□□□□□ -1.41
UBR4-210ENST00000466969 GHRHP01286 108 aa6.22□□□□□ -1.41
UBR4-210ENST00000466969 ZC2HC1BQ5TFG8 222 aa6.22□□□□□ -1.41
UBR4-210ENST00000466969 ORMDL3Q8N138 153 aa6.22□□□□□ -1.41
UBR4-210ENST00000466969 CDKN2A-AS1Q9UH64 79 aa6.22□□□□□ -1.41
UBR4-210ENST00000466969 ETDCA0A1B0GVM5 59 aa6.21□□□□□ -1.42
UBR4-210ENST00000466969 PAPPA-AS1Q5QFB9 102 aa6.21□□□□□ -1.42
UBR4-210ENST00000466969 COX7B2Q8TF08 81 aa6.21□□□□□ -1.42
UBR4-210ENST00000466969 SMIM27A0A1W2PRY6 76 aa6.2□□□□□ -1.42
UBR4-210ENST00000466969 TCTE3Q8IZS6 198 aa6.2□□□□□ -1.42
UBR4-210ENST00000466969 PRELID3AQ96N28 172 aa6.2□□□□□ -1.42
UBR4-210ENST00000466969 SMIM1B2RUZ4 78 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 SPRR2EP22531 72 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 PFN2P35080 140 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 SPRR2BP35325 72 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 SPRR2AP35326 72 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 BLOC1S1P78537 153 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 PDZD11Q5EBL8 140 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 MRPL54Q6P161 138 aaKnown RBP6.19□□□□□ -1.42
UBR4-210ENST00000466969 TMEM136Q6ZRR5 245 aa6.19□□□□□ -1.42
UBR4-210ENST00000466969 PRYO14603 147 aa6.18□□□□□ -1.42
UBR4-210ENST00000466969 ORMDL2Q53FV1 153 aa6.18□□□□□ -1.42
UBR4-210ENST00000466969 MAP1LC3AQ9H492 121 aa6.18□□□□□ -1.42
UBR4-210ENST00000466969 SND1-IT1Q9HBX3 110 aa6.18□□□□□ -1.42
UBR4-210ENST00000466969 LAMTOR2Q9Y2Q5 125 aa6.18□□□□□ -1.42
UBR4-210ENST00000466969 LOC389332A0A1B0GUA5 103 aa6.17□□□□□ -1.42
UBR4-210ENST00000466969 ATP5LO75964 103 aa6.17□□□□□ -1.42
UBR4-210ENST00000466969 A0A1B0GXF2 115 aa6.16□□□□□ -1.42
UBR4-210ENST00000466969 IGIPA6NJ69 53 aa6.16□□□□□ -1.42
UBR4-210ENST00000466969 K7EMI3 77 aa6.16□□□□□ -1.42
UBR4-210ENST00000466969 ERC2-IT1O76042 136 aa6.16□□□□□ -1.42
UBR4-210ENST00000466969 ADIRFQ15847 76 aa6.16□□□□□ -1.42
UBR4-210ENST00000466969 Q8N8P6 123 aa6.16□□□□□ -1.42
UBR4-210ENST00000466969 Q8N9P0 234 aaPredicted RBP6.16□□□□□ -1.42
UBR4-210ENST00000466969 SPRR1AP35321 89 aa6.15□□□□□ -1.42
UBR4-210ENST00000466969 RPL23P62829 140 aaKnown RBP6.15□□□□□ -1.42
UBR4-210ENST00000466969 Q8NDZ9 215 aa6.15□□□□□ -1.42
UBR4-210ENST00000466969 SRP19P09132 144 aaKnown RBP6.14□□□□□ -1.43
UBR4-210ENST00000466969 G0S2P27469 103 aa6.14□□□□□ -1.43
UBR4-210ENST00000466969 C10orf91Q5T1B1 145 aa6.14□□□□□ -1.43
UBR4-210ENST00000466969 C1orf195Q5TG92 126 aa6.14□□□□□ -1.43
UBR4-210ENST00000466969 IGLV5-45A0A087WSX0 123 aa6.13□□□□□ -1.43
UBR4-210ENST00000466969 TINCRA0A1B0GVN0 87 aa6.13□□□□□ -1.43
UBR4-210ENST00000466969 EIF4EBP3O60516 100 aaPredicted RBP6.13□□□□□ -1.43
UBR4-210ENST00000466969 C21orf62-AS1Q17RA5 79 aa6.13□□□□□ -1.43
UBR4-210ENST00000466969 Q6ZVH6 145 aa6.13□□□□□ -1.43
UBR4-210ENST00000466969 Q75L30 129 aa6.13□□□□□ -1.43
UBR4-210ENST00000466969 ATP5L2Q7Z4Y8 100 aa6.13□□□□□ -1.43
UBR4-210ENST00000466969 NAT8Q9UHE5 227 aa6.13□□□□□ -1.43
UBR4-210ENST00000466969 TRAV9-1A0A075B6T8 112 aa6.12□□□□□ -1.43
UBR4-210ENST00000466969 SPINK8P0C7L1 97 aa6.12□□□□□ -1.43
UBR4-210ENST00000466969 COMMD7Q86VX2 200 aa6.12□□□□□ -1.43
UBR4-210ENST00000466969 LINC00518Q8N0U6 118 aa6.12□□□□□ -1.43
UBR4-210ENST00000466969 S100A12P80511 92 aa6.11□□□□□ -1.43
UBR4-210ENST00000466969 CLLU1Q5K131 121 aa6.11□□□□□ -1.43
UBR4-210ENST00000466969 ALKAL2Q6UX46 152 aa6.11□□□□□ -1.43
UBR4-210ENST00000466969 ERG28Q9UKR5 140 aa6.11□□□□□ -1.43
UBR4-210ENST00000466969 H3BRM9 83 aa6.1□□□□□ -1.43
UBR4-210ENST00000466969 H7C2G1 150 aa6.1□□□□□ -1.43
UBR4-210ENST00000466969 COX17Q14061 63 aa6.1□□□□□ -1.43
UBR4-210ENST00000466969 KCNQ1DNQ9H478 68 aa6.1□□□□□ -1.43
UBR4-210ENST00000466969 MRPL18Q9H0U6 180 aaKnown RBP6.09□□□□□ -1.43
UBR4-210ENST00000466969 NXT2Q9NPJ8 142 aaKnown RBP6.09□□□□□ -1.43
UBR4-210ENST00000466969 PCP4L1A6NKN8 68 aa6.08□□□□□ -1.44
UBR4-210ENST00000466969 B5MCH6 92 aa6.08□□□□□ -1.44
UBR4-210ENST00000466969 ERASQ7Z444 233 aa6.08□□□□□ -1.44
UBR4-210ENST00000466969 TOMM6Q96B49 74 aa6.08□□□□□ -1.44
UBR4-210ENST00000466969 SCGB3A1Q96QR1 104 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms