RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 ANKRD39Q53RE8 183 aa9.01□□□□□ -0.97
DNMT3A-208ENST00000466601 C22orf24Q9Y442 160 aa9.01□□□□□ -0.97
DNMT3A-208ENST00000466601 SCGB1D1O95968 90 aa9□□□□□ -0.97
DNMT3A-208ENST00000466601 MIR7-3HGQ8N6C7 128 aa9□□□□□ -0.97
DNMT3A-208ENST00000466601 ABCA13Q86UQ4 5058 aa8.99□□□□□ -0.97
DNMT3A-208ENST00000466601 A0A0J9YXY3 114 aa8.99□□□□□ -0.97
DNMT3A-208ENST00000466601 ZNF815PA8K554 130 aa8.99□□□□□ -0.97
DNMT3A-208ENST00000466601 TTTY13Q9BZ97 58 aa8.99□□□□□ -0.97
DNMT3A-208ENST00000466601 VPS13BQ7Z7G8 4022 aa8.99□□□□□ -0.97
DNMT3A-208ENST00000466601 LBHQ53QV2 105 aaPredicted RBP8.98□□□□□ -0.97
DNMT3A-208ENST00000466601 TP73-AS1Q9UF72 201 aa8.98□□□□□ -0.97
DNMT3A-208ENST00000466601 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
DNMT3A-208ENST00000466601 HSBP1L1C9JCN9 74 aa8.97□□□□□ -0.97
DNMT3A-208ENST00000466601 UBE2BP63146 152 aa8.97□□□□□ -0.97
DNMT3A-208ENST00000466601 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
DNMT3A-208ENST00000466601 RPL24P83731 157 aaKnown RBP8.97□□□□□ -0.97
DNMT3A-208ENST00000466601 MRPL55Q7Z7F7 128 aaKnown RBP8.97□□□□□ -0.97
DNMT3A-208ENST00000466601 INAFM2P0DMQ5 153 aa8.96□□□□□ -0.98
DNMT3A-208ENST00000466601 VPREB1P12018 145 aa8.96□□□□□ -0.98
DNMT3A-208ENST00000466601 KRTAP11-1Q8IUC1 163 aa8.96□□□□□ -0.98
DNMT3A-208ENST00000466601 DAND5Q8N907 189 aa8.96□□□□□ -0.98
DNMT3A-208ENST00000466601 NKAPP1Q8N9T2 125 aa8.96□□□□□ -0.98
DNMT3A-208ENST00000466601 Q8NDZ9 215 aa8.95□□□□□ -0.98
DNMT3A-208ENST00000466601 PSORS1C2Q9UIG4 136 aa8.95□□□□□ -0.98
DNMT3A-208ENST00000466601 ADAMTSL4-AS1Q5T5F5 129 aa8.94□□□□□ -0.98
DNMT3A-208ENST00000466601 PCP2Q8IVA1 136 aa8.94□□□□□ -0.98
DNMT3A-208ENST00000466601 LINC00167Q96N53 147 aa8.94□□□□□ -0.98
DNMT3A-208ENST00000466601 LOC107984156A0A0G2JMH3 177 aa8.93□□□□□ -0.98
DNMT3A-208ENST00000466601 GAGE10A6NGK3 116 aa8.93□□□□□ -0.98
DNMT3A-208ENST00000466601 TIMM17BO60830 172 aa8.93□□□□□ -0.98
DNMT3A-208ENST00000466601 JOSD1Q15040 202 aaPredicted RBP8.93□□□□□ -0.98
DNMT3A-208ENST00000466601 ARL17AQ8IVW1 177 aa8.93□□□□□ -0.98
DNMT3A-208ENST00000466601 BOD1L2Q8IYS8 172 aa8.93□□□□□ -0.98
DNMT3A-208ENST00000466601 HNRNPA3P51991 378 aaKnown RBP8.92□□□□□ -0.98
DNMT3A-208ENST00000466601 C1orf137Q5JT78 98 aa8.92□□□□□ -0.98
DNMT3A-208ENST00000466601 SCGB1D4Q6XE38 83 aa8.92□□□□□ -0.98
DNMT3A-208ENST00000466601 LITAFQ99732 161 aa8.92□□□□□ -0.98
DNMT3A-208ENST00000466601 MIEN1Q9BRT3 115 aa8.92□□□□□ -0.98
DNMT3A-208ENST00000466601 RPL37AP8A6NKH3 93 aa8.91□□□□□ -0.98
DNMT3A-208ENST00000466601 NPC2P61916 151 aa8.9□□□□□ -0.98
DNMT3A-208ENST00000466601 M0R378 163 aa8.89□□□□□ -0.99
DNMT3A-208ENST00000466601 SOSTDC1Q6X4U4 206 aa8.89□□□□□ -0.99
DNMT3A-208ENST00000466601 SRRM2Q9UQ35 2752 aaKnown RBP8.88□□□□□ -0.99
DNMT3A-208ENST00000466601 IGLV1-50A0A075B6I6 118 aa8.88□□□□□ -0.99
DNMT3A-208ENST00000466601 TMEM238C9JI98 176 aa8.88□□□□□ -0.99
DNMT3A-208ENST00000466601 NCR3O14931 201 aa8.88□□□□□ -0.99
DNMT3A-208ENST00000466601 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
DNMT3A-208ENST00000466601 LINC00308Q8TCZ7 52 aa8.88□□□□□ -0.99
DNMT3A-208ENST00000466601 IGKV2-28A0A075B6P5 120 aa8.87□□□□□ -0.99
DNMT3A-208ENST00000466601 NDUFC2O95298 119 aa8.87□□□□□ -0.99
DNMT3A-208ENST00000466601 IGKV2D-28P01615 120 aa8.87□□□□□ -0.99
DNMT3A-208ENST00000466601 IGLV7-43P04211 117 aa8.87□□□□□ -0.99
DNMT3A-208ENST00000466601 SRSF9Q13242 221 aaKnown RBP eCLIP8.87□□□□□ -0.99
DNMT3A-208ENST00000466601 SPANXDQ9BXN6 97 aa8.87□□□□□ -0.99
DNMT3A-208ENST00000466601 SPANXCQ9NY87 97 aa8.87□□□□□ -0.99
DNMT3A-208ENST00000466601 PYY3Q5JQD4 70 aa8.86□□□□□ -0.99
DNMT3A-208ENST00000466601 VAMP8Q9BV40 100 aa8.86□□□□□ -0.99
DNMT3A-208ENST00000466601 PAM16Q9Y3D7 125 aa8.86□□□□□ -0.99
DNMT3A-208ENST00000466601 PKHD1L1Q86WI1 4243 aa8.86□□□□□ -0.99
DNMT3A-208ENST00000466601 COX8AP10176 69 aa8.85□□□□□ -0.99
DNMT3A-208ENST00000466601 SPATA45Q537H7 98 aa8.85□□□□□ -0.99
DNMT3A-208ENST00000466601 SPINK6Q6UWN8 80 aa8.85□□□□□ -0.99
DNMT3A-208ENST00000466601 TRBV10-2A0A0K0K1G8 114 aa8.84□□□□□ -0.99
DNMT3A-208ENST00000466601 BCE1O60756 84 aa8.84□□□□□ -0.99
DNMT3A-208ENST00000466601 Q6ZVH6 145 aa8.84□□□□□ -0.99
DNMT3A-208ENST00000466601 SPANXB1Q9NS25 103 aaPredicted RBP8.84□□□□□ -0.99
DNMT3A-208ENST00000466601 IFITM1P13164 125 aa8.82□□□□□ -1
DNMT3A-208ENST00000466601 REG3GQ6UW15 175 aa8.82□□□□□ -1
DNMT3A-208ENST00000466601 COPS9Q8WXC6 57 aa8.82□□□□□ -1
DNMT3A-208ENST00000466601 TMEM126AQ9H061 195 aa8.82□□□□□ -1
DNMT3A-208ENST00000466601 TRBV10-3A0A0K0K1G6 114 aa8.81□□□□□ -1
DNMT3A-208ENST00000466601 DLEU1O43261 78 aa8.81□□□□□ -1
DNMT3A-208ENST00000466601 MUSTN1Q8IVN3 82 aa8.81□□□□□ -1
DNMT3A-208ENST00000466601 C14orf144Q96I85 54 aa8.81□□□□□ -1
DNMT3A-208ENST00000466601 ZNF861PO60384 105 aa8.8□□□□□ -1
DNMT3A-208ENST00000466601 DDTP30046 118 aa8.8□□□□□ -1
DNMT3A-208ENST00000466601 S100A7L2Q5SY68 101 aa8.8□□□□□ -1
DNMT3A-208ENST00000466601 PPDPFQ9H3Y8 114 aa8.8□□□□□ -1
DNMT3A-208ENST00000466601 FLG2Q5D862 2391 aaPredicted RBP8.8□□□□□ -1
DNMT3A-208ENST00000466601 PRYO14603 147 aa8.79□□□□□ -1
DNMT3A-208ENST00000466601 RPL28P46779 137 aaKnown RBP8.79□□□□□ -1
DNMT3A-208ENST00000466601 UBE2AP49459 152 aa8.79□□□□□ -1
DNMT3A-208ENST00000466601 S100A12P80511 92 aa8.79□□□□□ -1
DNMT3A-208ENST00000466601 DIRC1Q969H9 104 aa8.79□□□□□ -1
DNMT3A-208ENST00000466601 KCNQ1DNQ9H478 68 aa8.79□□□□□ -1
DNMT3A-208ENST00000466601 IGLV6-57P01721 117 aa8.78□□□□□ -1
DNMT3A-208ENST00000466601 FAM19A1Q7Z5A9 133 aa8.78□□□□□ -1
DNMT3A-208ENST00000466601 LINC00518Q8N0U6 118 aa8.78□□□□□ -1
DNMT3A-208ENST00000466601 KRTAP29-1A8MX34 341 aaPredicted RBP8.77□□□□□ -1.01
DNMT3A-208ENST00000466601 H0Y9J4 135 aa8.77□□□□□ -1.01
DNMT3A-208ENST00000466601 SLC25A34Q6PIV7 304 aa8.77□□□□□ -1.01
DNMT3A-208ENST00000466601 OXTP01178 125 aa8.76□□□□□ -1.01
DNMT3A-208ENST00000466601 SPRR1AP35321 89 aa8.76□□□□□ -1.01
DNMT3A-208ENST00000466601 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
DNMT3A-208ENST00000466601 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
DNMT3A-208ENST00000466601 PRLHP81277 87 aa8.75□□□□□ -1.01
DNMT3A-208ENST00000466601 FAT3Q8TDW7 4589 aa8.75□□□□□ -1.01
DNMT3A-208ENST00000466601 MYCBP2O75592 4640 aa8.75□□□□□ -1.01
DNMT3A-208ENST00000466601 LINC00337Q8N6G1 96 aa8.74□□□□□ -1.01
DNMT3A-208ENST00000466601 HIST1H4GQ99525 98 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms