RNA–Protein interactions for RNA: ENST00000466159.6

SYNE1-217, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYNE1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-217ENST00000466159 KRTAP24-1Q3LI83 254 aa6.02□□□□□ -1.45
SYNE1-217ENST00000466159 TENM3Q9P273 2699 aa6.02□□□□□ -1.45
SYNE1-217ENST00000466159 FLNBO75369 2602 aaKnown RBP6.01□□□□□ -1.45
SYNE1-217ENST00000466159 A0A0J9YWU9 116 aa6.01□□□□□ -1.45
SYNE1-217ENST00000466159 TRBV7-7A0A0K0K1E9 115 aa6.01□□□□□ -1.45
SYNE1-217ENST00000466159 SDIM1Q6ZPB5 146 aa6.01□□□□□ -1.45
SYNE1-217ENST00000466159 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
SYNE1-217ENST00000466159 ORMDL1Q9P0S3 153 aa6.01□□□□□ -1.45
SYNE1-217ENST00000466159 C6orf99Q4VX62 202 aa6.01□□□□□ -1.45
SYNE1-217ENST00000466159 Q8N814 137 aa6.01□□□□□ -1.45
SYNE1-217ENST00000466159 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
SYNE1-217ENST00000466159 LINC00643Q86TS7 51 aa6□□□□□ -1.45
SYNE1-217ENST00000466159 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
SYNE1-217ENST00000466159 LINC00167Q96N53 147 aa5.99□□□□□ -1.45
SYNE1-217ENST00000466159 H3BNG1 76 aa5.99□□□□□ -1.45
SYNE1-217ENST00000466159 RPL18AQ02543 176 aaKnown RBP5.99□□□□□ -1.45
SYNE1-217ENST00000466159 EGFEM1PQ0D2K5 195 aa5.99□□□□□ -1.45
SYNE1-217ENST00000466159 ESRGQ1W209 222 aa5.99□□□□□ -1.45
SYNE1-217ENST00000466159 HIGD2BQ4VC39 106 aa5.99□□□□□ -1.45
SYNE1-217ENST00000466159 XAGE1AQ9HD64 81 aa5.99□□□□□ -1.45
SYNE1-217ENST00000466159 C3orf56Q8N813 242 aa5.98□□□□□ -1.45
SYNE1-217ENST00000466159 GVQW2A0A096LPI5 108 aaPredicted RBP5.98□□□□□ -1.45
SYNE1-217ENST00000466159 A0A1B0GX51 115 aa5.98□□□□□ -1.45
SYNE1-217ENST00000466159 KRTAP26-1Q6PEX3 210 aa5.97□□□□□ -1.45
SYNE1-217ENST00000466159 MUC7Q8TAX7 377 aa5.97□□□□□ -1.45
SYNE1-217ENST00000466159 IMUPQ9GZP8 106 aa5.97□□□□□ -1.45
SYNE1-217ENST00000466159 ZNF561-AS1K7EIQ3 104 aa5.96□□□□□ -1.45
SYNE1-217ENST00000466159 IGLV6-57P01721 117 aa5.96□□□□□ -1.45
SYNE1-217ENST00000466159 LINC00575Q6W349 94 aa5.96□□□□□ -1.45
SYNE1-217ENST00000466159 LINC00846Q9NV44 126 aa5.96□□□□□ -1.45
SYNE1-217ENST00000466159 FAM236AA0A1B0GUQ0 79 aa5.96□□□□□ -1.46
SYNE1-217ENST00000466159 FAM236BA0A1B0GV22 79 aa5.96□□□□□ -1.46
SYNE1-217ENST00000466159 TMEM256-PLSCR3K7ERE1 68 aa5.96□□□□□ -1.46
SYNE1-217ENST00000466159 CAMK2N2Q96S95 79 aa5.96□□□□□ -1.46
SYNE1-217ENST00000466159 MAST4O15021 2626 aa5.96□□□□□ -1.46
SYNE1-217ENST00000466159 DEFB131BA0A096LNP1 70 aa5.95□□□□□ -1.46
SYNE1-217ENST00000466159 NOTCH1P46531 2555 aa5.95□□□□□ -1.46
SYNE1-217ENST00000466159 TRBV10-3A0A0K0K1G6 114 aa5.95□□□□□ -1.46
SYNE1-217ENST00000466159 C11orf45Q8TAV5 145 aa5.95□□□□□ -1.46
SYNE1-217ENST00000466159 DNAH3Q8TD57 4116 aa5.95□□□□□ -1.46
SYNE1-217ENST00000466159 Q6ZRU5 148 aa5.95□□□□□ -1.46
SYNE1-217ENST00000466159 C15orf56Q8N910 161 aa5.95□□□□□ -1.46
SYNE1-217ENST00000466159 hADV29S1A0JD25 119 aa5.94□□□□□ -1.46
SYNE1-217ENST00000466159 CCKP06307 115 aa5.94□□□□□ -1.46
SYNE1-217ENST00000466159 JMJD7-PLA2G4BH0Y9G9 81 aa5.94□□□□□ -1.46
SYNE1-217ENST00000466159 IGKV3D-7A0A0C4DH55 119 aa5.93□□□□□ -1.46
SYNE1-217ENST00000466159 IGKV2D-24A0A075B6R9 120 aa5.93□□□□□ -1.46
SYNE1-217ENST00000466159 PRB2P02812 416 aaPredicted RBP5.93□□□□□ -1.46
SYNE1-217ENST00000466159 C1orf43Q9BWL3 253 aa5.93□□□□□ -1.46
SYNE1-217ENST00000466159 TRAV23DV6A0A075B6W5 121 aa5.92□□□□□ -1.46
SYNE1-217ENST00000466159 LINC01556Q5JQF7 62 aa5.92□□□□□ -1.46
SYNE1-217ENST00000466159 VPREB1P12018 145 aa5.92□□□□□ -1.46
SYNE1-217ENST00000466159 Q6ZQY7 126 aa5.91□□□□□ -1.46
SYNE1-217ENST00000466159 C3orf22Q8N5N4 141 aa5.91□□□□□ -1.46
SYNE1-217ENST00000466159 DIRC1Q969H9 104 aa5.91□□□□□ -1.46
SYNE1-217ENST00000466159 NDUFC2-KCTD14E9PQ53 114 aa5.9□□□□□ -1.46
SYNE1-217ENST00000466159 ZNF73O43830 326 aaPredicted RBP5.9□□□□□ -1.46
SYNE1-217ENST00000466159 C9orf153Q5TBE3 101 aa5.9□□□□□ -1.46
SYNE1-217ENST00000466159 Q6JHZ5 121 aa5.9□□□□□ -1.46
SYNE1-217ENST00000466159 Q6ZRP5 223 aa5.9□□□□□ -1.46
SYNE1-217ENST00000466159 C2orf48Q96LS8 159 aa5.9□□□□□ -1.46
SYNE1-217ENST00000466159 COL6A5A8TX70 2615 aa5.9□□□□□ -1.46
SYNE1-217ENST00000466159 LAMTOR3Q9UHA4 124 aa5.9□□□□□ -1.47
SYNE1-217ENST00000466159 UQCRQO14949 82 aa5.89□□□□□ -1.47
SYNE1-217ENST00000466159 RBM3P98179 157 aaKnown RBP5.89□□□□□ -1.47
SYNE1-217ENST00000466159 HUWE1Q7Z6Z7 4374 aaKnown RBP5.88□□□□□ -1.47
SYNE1-217ENST00000466159 NBEAL1Q6ZS30 2694 aa5.88□□□□□ -1.47
SYNE1-217ENST00000466159 A0A087WVE0 104 aa5.88□□□□□ -1.47
SYNE1-217ENST00000466159 M0R378 163 aa5.88□□□□□ -1.47
SYNE1-217ENST00000466159 MRAPQ8TCY5 172 aa5.88□□□□□ -1.47
SYNE1-217ENST00000466159 DNAH10OSP0CZ25 163 aa5.88□□□□□ -1.47
SYNE1-217ENST00000466159 COX7BP24311 80 aa5.88□□□□□ -1.47
SYNE1-217ENST00000466159 ELOF1P60002 83 aaKnown RBP5.88□□□□□ -1.47
SYNE1-217ENST00000466159 SYCNQ0VAF6 134 aa5.88□□□□□ -1.47
SYNE1-217ENST00000466159 M0R2N4 97 aa5.87□□□□□ -1.47
SYNE1-217ENST00000466159 HIST1H4AP62805 103 aaKnown RBP5.87□□□□□ -1.47
SYNE1-217ENST00000466159 Q6ZQT0 140 aa5.87□□□□□ -1.47
SYNE1-217ENST00000466159 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
SYNE1-217ENST00000466159 DNAH1Q9P2D7 4330 aa5.86□□□□□ -1.47
SYNE1-217ENST00000466159 TRAV10A0A0B4J240 114 aa5.86□□□□□ -1.47
SYNE1-217ENST00000466159 LOC107984640A0A0U1RRK4 108 aa5.86□□□□□ -1.47
SYNE1-217ENST00000466159 CASC10Q5T4H9 136 aa5.86□□□□□ -1.47
SYNE1-217ENST00000466159 LOC110117498A0A087WWA1 95 aa5.85□□□□□ -1.47
SYNE1-217ENST00000466159 COX7CP15954 63 aa5.85□□□□□ -1.47
SYNE1-217ENST00000466159 TRBV7-6A0A0J9YX20 115 aa5.85□□□□□ -1.47
SYNE1-217ENST00000466159 KRTAP21-3Q3LHN1 58 aa5.85□□□□□ -1.47
SYNE1-217ENST00000466159 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.85□□□□□ -1.47
SYNE1-217ENST00000466159 DSCR8Q96T75 97 aa5.85□□□□□ -1.47
SYNE1-217ENST00000466159 J3KT08 172 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 K7EIL1 84 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 SERTAD4-AS1Q5TG53 156 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 TM2D3Q9BRN9 247 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 F8WDY8 70 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 CRYGAP11844 174 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 LINC00528Q8N1L1 170 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 UBL5Q9BZL1 73 aa5.84□□□□□ -1.47
SYNE1-217ENST00000466159 C5orf47Q569G3 176 aa5.83□□□□□ -1.48
SYNE1-217ENST00000466159 USP17L23D6RBM5 183 aa5.83□□□□□ -1.48
SYNE1-217ENST00000466159 ATOX1O00244 68 aa5.83□□□□□ -1.48
SYNE1-217ENST00000466159 H3BQ85 93 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms