RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 IGLV7-43P04211 117 aa8□□□□□ -1.13
COL28A1-206ENST00000465339 FABP4P15090 132 aa8□□□□□ -1.13
COL28A1-206ENST00000465339 PFN2P35080 140 aa8□□□□□ -1.13
COL28A1-206ENST00000465339 KRTAP11-1Q8IUC1 163 aa8□□□□□ -1.13
COL28A1-206ENST00000465339 ERG28Q9UKR5 140 aa8□□□□□ -1.13
COL28A1-206ENST00000465339 LRP1Q07954 4544 aaKnown RBP8□□□□□ -1.13
COL28A1-206ENST00000465339 H0Y8G0 127 aa7.99□□□□□ -1.13
COL28A1-206ENST00000465339 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
COL28A1-206ENST00000465339 LINC01600Q96MT4 127 aa7.99□□□□□ -1.13
COL28A1-206ENST00000465339 GAGE10A6NGK3 116 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BKO60814 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BJP06899 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BOP23527 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BBP33778 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 PCP4P48539 62 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BDP58876 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BCP62807 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST2H2BEQ16778 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.98□□□□□ -1.13
COL28A1-206ENST00000465339 MRPL55Q7Z7F7 128 aaKnown RBP7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BHQ93079 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BNQ99877 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 HIST1H2BMQ99879 126 aa7.98□□□□□ -1.13
COL28A1-206ENST00000465339 IGLV5-37A0A075B6J1 123 aa7.97□□□□□ -1.13
COL28A1-206ENST00000465339 KRTAP4-8A0A0G2JLE6 195 aa7.97□□□□□ -1.13
COL28A1-206ENST00000465339 TRIAP1O43715 76 aa7.97□□□□□ -1.13
COL28A1-206ENST00000465339 MT1HL1P0DM35 61 aa7.97□□□□□ -1.13
COL28A1-206ENST00000465339 PLNP26678 52 aa7.97□□□□□ -1.13
COL28A1-206ENST00000465339 DIRC1Q969H9 104 aa7.97□□□□□ -1.13
COL28A1-206ENST00000465339 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
COL28A1-206ENST00000465339 FAT3Q8TDW7 4589 aa7.96□□□□□ -1.13
COL28A1-206ENST00000465339 SND1-IT1Q9HBX3 110 aa7.96□□□□□ -1.14
COL28A1-206ENST00000465339 HERC1Q15751 4861 aa7.96□□□□□ -1.14
COL28A1-206ENST00000465339 DPM2O94777 84 aa7.95□□□□□ -1.14
COL28A1-206ENST00000465339 HERV-K104P63124 156 aa7.95□□□□□ -1.14
COL28A1-206ENST00000465339 NKAPP1Q8N9T2 125 aa7.95□□□□□ -1.14
COL28A1-206ENST00000465339 LINC00167Q96N53 147 aa7.95□□□□□ -1.14
COL28A1-206ENST00000465339 LINC00587B1AMM8 73 aa7.94□□□□□ -1.14
COL28A1-206ENST00000465339 LINC00158P58513 81 aa7.94□□□□□ -1.14
COL28A1-206ENST00000465339 RPL24P83731 157 aaKnown RBP7.94□□□□□ -1.14
COL28A1-206ENST00000465339 LEPROTO15243 131 aa7.93□□□□□ -1.14
COL28A1-206ENST00000465339 IGKCP01834 107 aa7.93□□□□□ -1.14
COL28A1-206ENST00000465339 HERVK_113P61574 105 aa7.93□□□□□ -1.14
COL28A1-206ENST00000465339 PLEKHB2Q96CS7 222 aa7.93□□□□□ -1.14
COL28A1-206ENST00000465339 MYMXA0A1B0GTQ4 84 aa7.92□□□□□ -1.14
COL28A1-206ENST00000465339 H0Y9J4 135 aa7.92□□□□□ -1.14
COL28A1-206ENST00000465339 ATP6V1G1O75348 118 aa7.92□□□□□ -1.14
COL28A1-206ENST00000465339 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
COL28A1-206ENST00000465339 NDUFA12Q9UI09 145 aa7.92□□□□□ -1.14
COL28A1-206ENST00000465339 RPL37AP8A6NKH3 93 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 SYS1-DBNDD2H3BUS1 97 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 ZNF861PO60384 105 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 VPREB1P12018 145 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 S100A1P23297 94 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 MEIG1Q5JSS6 88 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 COA6Q5JTJ3 125 aaKnown RBP7.91□□□□□ -1.14
COL28A1-206ENST00000465339 LCE4AQ5TA78 99 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 PMCHL2Q9BQD1 86 aa7.91□□□□□ -1.14
COL28A1-206ENST00000465339 A0A0U1RRA0 63 aa7.9□□□□□ -1.14
COL28A1-206ENST00000465339 BCE1O60756 84 aa7.9□□□□□ -1.14
COL28A1-206ENST00000465339 SMIM13P0DJ93 91 aa7.9□□□□□ -1.14
COL28A1-206ENST00000465339 J3QQQ9 107 aa7.89□□□□□ -1.15
COL28A1-206ENST00000465339 RPL28P46779 137 aaKnown RBP7.89□□□□□ -1.15
COL28A1-206ENST00000465339 NMUP48645 174 aa7.89□□□□□ -1.15
COL28A1-206ENST00000465339 IGLV1-50A0A075B6I6 118 aa7.88□□□□□ -1.15
COL28A1-206ENST00000465339 LGALS3P17931 250 aaKnown RBP7.88□□□□□ -1.15
COL28A1-206ENST00000465339 PET117Q6UWS5 81 aa7.88□□□□□ -1.15
COL28A1-206ENST00000465339 TSPEAR-AS2P59090 65 aa7.87□□□□□ -1.15
COL28A1-206ENST00000465339 MIR7-3HGQ8N6C7 128 aa7.87□□□□□ -1.15
COL28A1-206ENST00000465339 IGKV2-28A0A075B6P5 120 aa7.86□□□□□ -1.15
COL28A1-206ENST00000465339 IGKV2D-28P01615 120 aa7.86□□□□□ -1.15
COL28A1-206ENST00000465339 LINC01545Q5VT33 79 aa7.86□□□□□ -1.15
COL28A1-206ENST00000465339 E9PLD3 99 aa7.85□□□□□ -1.15
COL28A1-206ENST00000465339 M0R378 163 aa7.85□□□□□ -1.15
COL28A1-206ENST00000465339 CTAG1AP78358 180 aa7.85□□□□□ -1.15
COL28A1-206ENST00000465339 BOD1L2Q8IYS8 172 aa7.85□□□□□ -1.15
COL28A1-206ENST00000465339 Q8NDZ9 215 aa7.85□□□□□ -1.15
COL28A1-206ENST00000465339 KRTAP1-4P0C5Y4 121 aa7.84□□□□□ -1.15
COL28A1-206ENST00000465339 C3orf79P0CE67 100 aa7.84□□□□□ -1.15
COL28A1-206ENST00000465339 IGKV2D-26A0A0A0MRZ7 120 aa7.83□□□□□ -1.16
COL28A1-206ENST00000465339 LOC107984156A0A0G2JMH3 177 aa7.83□□□□□ -1.16
COL28A1-206ENST00000465339 UBE2AP49459 152 aa7.83□□□□□ -1.16
COL28A1-206ENST00000465339 LCE1DQ5T752 114 aa7.83□□□□□ -1.16
COL28A1-206ENST00000465339 ARL17AQ8IVW1 177 aa7.83□□□□□ -1.16
COL28A1-206ENST00000465339 PRR26Q8N8Z3 221 aa7.83□□□□□ -1.16
COL28A1-206ENST00000465339 TMEM126AQ9H061 195 aa7.83□□□□□ -1.16
COL28A1-206ENST00000465339 KRTDAPP60985 99 aa7.82□□□□□ -1.16
COL28A1-206ENST00000465339 KRTAP13-1Q8IUC0 172 aa7.82□□□□□ -1.16
COL28A1-206ENST00000465339 TNXBP22105 4242 aa7.82□□□□□ -1.16
COL28A1-206ENST00000465339 TMEM238C9JI98 176 aa7.81□□□□□ -1.16
COL28A1-206ENST00000465339 RPL13AP40429 203 aaKnown RBP7.81□□□□□ -1.16
COL28A1-206ENST00000465339 A0A0J9YXY3 114 aa7.8□□□□□ -1.16
COL28A1-206ENST00000465339 C20orf202A1L168 122 aa7.8□□□□□ -1.16
COL28A1-206ENST00000465339 KRTAP9-7A8MTY7 169 aa7.8□□□□□ -1.16
COL28A1-206ENST00000465339 FAM19A1Q7Z5A9 133 aa7.8□□□□□ -1.16
COL28A1-206ENST00000465339 DAND5Q8N907 189 aa7.8□□□□□ -1.16
COL28A1-206ENST00000465339 MIEN1Q9BRT3 115 aa7.8□□□□□ -1.16
COL28A1-206ENST00000465339 AKR1D1P51857 326 aa7.79□□□□□ -1.16
COL28A1-206ENST00000465339 NCR3O14931 201 aa7.78□□□□□ -1.16
COL28A1-206ENST00000465339 S100A12P80511 92 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms