RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 FAM19A5Q7Z5A7 132 aaPredicted RBP12.97□□□□□ -0.33
CD58-204ENST00000464088 LGALS3P17931 250 aaKnown RBP12.96□□□□□ -0.33
CD58-204ENST00000464088 NMUP48645 174 aa12.96□□□□□ -0.33
CD58-204ENST00000464088 C7orf33Q8WU49 177 aa12.96□□□□□ -0.33
CD58-204ENST00000464088 RPL37AP61513 92 aaKnown RBP12.95□□□□□ -0.34
CD58-204ENST00000464088 PHF5AQ7RTV0 110 aaKnown RBP12.95□□□□□ -0.34
CD58-204ENST00000464088 IGKV2D-26A0A0A0MRZ7 120 aa12.94□□□□□ -0.34
CD58-204ENST00000464088 AKR1D1P51857 326 aa12.94□□□□□ -0.34
CD58-204ENST00000464088 SND1-IT1Q9HBX3 110 aa12.94□□□□□ -0.34
CD58-204ENST00000464088 LRP2P98164 4655 aa12.93□□□□□ -0.34
CD58-204ENST00000464088 SMIM13P0DJ93 91 aa12.93□□□□□ -0.34
CD58-204ENST00000464088 LINC00158P58513 81 aa12.93□□□□□ -0.34
CD58-204ENST00000464088 ATOH7Q8N100 152 aa12.93□□□□□ -0.34
CD58-204ENST00000464088 MT1HL1P0DM35 61 aa12.92□□□□□ -0.34
CD58-204ENST00000464088 MEIG1Q5JSS6 88 aa12.92□□□□□ -0.34
CD58-204ENST00000464088 A0A0U1RRA0 63 aa12.91□□□□□ -0.34
CD58-204ENST00000464088 M0QXV9 152 aa12.91□□□□□ -0.34
CD58-204ENST00000464088 LINC00587B1AMM8 73 aa12.9□□□□□ -0.34
CD58-204ENST00000464088 HNRNPA3P51991 378 aaKnown RBP12.9□□□□□ -0.34
CD58-204ENST00000464088 ANKRD39Q53RE8 183 aa12.9□□□□□ -0.34
CD58-204ENST00000464088 C22orf24Q9Y442 160 aa12.9□□□□□ -0.34
CD58-204ENST00000464088 IGLV5-37A0A075B6J1 123 aa12.89□□□□□ -0.35
CD58-204ENST00000464088 KRTAP11-1Q8IUC1 163 aa12.89□□□□□ -0.35
CD58-204ENST00000464088 PRR3P79522 188 aaKnown RBP12.88□□□□□ -0.35
CD58-204ENST00000464088 MIR7-3HGQ8N6C7 128 aa12.88□□□□□ -0.35
CD58-204ENST00000464088 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
CD58-204ENST00000464088 A0A0J9YXY3 114 aa12.87□□□□□ -0.35
CD58-204ENST00000464088 Q8NDZ9 215 aa12.87□□□□□ -0.35
CD58-204ENST00000464088 TTTY13Q9BZ97 58 aa12.87□□□□□ -0.35
CD58-204ENST00000464088 TNXBP22105 4242 aa12.86□□□□□ -0.35
CD58-204ENST00000464088 VPREB1P12018 145 aa12.86□□□□□ -0.35
CD58-204ENST00000464088 TMA7Q9Y2S6 64 aaKnown RBP12.85□□□□□ -0.35
CD58-204ENST00000464088 MRPL55Q7Z7F7 128 aaKnown RBP12.84□□□□□ -0.35
CD58-204ENST00000464088 PSORS1C2Q9UIG4 136 aa12.84□□□□□ -0.35
CD58-204ENST00000464088 ZNF815PA8K554 130 aa12.83□□□□□ -0.36
CD58-204ENST00000464088 SCGB1D1O95968 90 aa12.82□□□□□ -0.36
CD58-204ENST00000464088 LBHQ53QV2 105 aaPredicted RBP12.82□□□□□ -0.36
CD58-204ENST00000464088 DAND5Q8N907 189 aa12.82□□□□□ -0.36
CD58-204ENST00000464088 LOC107984156A0A0G2JMH3 177 aa12.81□□□□□ -0.36
CD58-204ENST00000464088 UBE2BP63146 152 aa12.81□□□□□ -0.36
CD58-204ENST00000464088 RPL24P83731 157 aaKnown RBP12.81□□□□□ -0.36
CD58-204ENST00000464088 ADAMTSL4-AS1Q5T5F5 129 aa12.81□□□□□ -0.36
CD58-204ENST00000464088 ARL17AQ8IVW1 177 aa12.81□□□□□ -0.36
CD58-204ENST00000464088 LINC00167Q96N53 147 aa12.81□□□□□ -0.36
CD58-204ENST00000464088 LITAFQ99732 161 aa12.81□□□□□ -0.36
CD58-204ENST00000464088 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
CD58-204ENST00000464088 TIMM17BO60830 172 aa12.79□□□□□ -0.36
CD58-204ENST00000464088 PCP2Q8IVA1 136 aa12.79□□□□□ -0.36
CD58-204ENST00000464088 BOD1L2Q8IYS8 172 aa12.78□□□□□ -0.36
CD58-204ENST00000464088 GAGE10A6NGK3 116 aa12.77□□□□□ -0.37
CD58-204ENST00000464088 HSBP1L1C9JCN9 74 aa12.76□□□□□ -0.37
CD58-204ENST00000464088 C1orf137Q5JT78 98 aa12.76□□□□□ -0.37
CD58-204ENST00000464088 SOSTDC1Q6X4U4 206 aa12.76□□□□□ -0.37
CD58-204ENST00000464088 EIF4EBP3O60516 100 aaPredicted RBP12.75□□□□□ -0.37
CD58-204ENST00000464088 SRSF9Q13242 221 aaKnown RBP eCLIP12.75□□□□□ -0.37
CD58-204ENST00000464088 JOSD1Q15040 202 aaPredicted RBP12.75□□□□□ -0.37
CD58-204ENST00000464088 RPL37AP8A6NKH3 93 aa12.74□□□□□ -0.37
CD58-204ENST00000464088 IGLV1-50A0A075B6I6 118 aa12.72□□□□□ -0.37
CD58-204ENST00000464088 M0R378 163 aa12.72□□□□□ -0.37
CD58-204ENST00000464088 IGLV7-43P04211 117 aa12.72□□□□□ -0.37
CD58-204ENST00000464088 SCGB1D4Q6XE38 83 aa12.71□□□□□ -0.37
CD58-204ENST00000464088 LINC00308Q8TCZ7 52 aa12.71□□□□□ -0.37
CD58-204ENST00000464088 MIEN1Q9BRT3 115 aa12.71□□□□□ -0.37
CD58-204ENST00000464088 NPC2P61916 151 aa12.7□□□□□ -0.38
CD58-204ENST00000464088 IGKV2-28A0A075B6P5 120 aa12.69□□□□□ -0.38
CD58-204ENST00000464088 NCR3O14931 201 aa12.69□□□□□ -0.38
CD58-204ENST00000464088 NDUFC2O95298 119 aa12.69□□□□□ -0.38
CD58-204ENST00000464088 IGKV2D-28P01615 120 aa12.69□□□□□ -0.38
CD58-204ENST00000464088 SPINK6Q6UWN8 80 aa12.69□□□□□ -0.38
CD58-204ENST00000464088 SPANXDQ9BXN6 97 aa12.69□□□□□ -0.38
CD58-204ENST00000464088 SPANXCQ9NY87 97 aa12.69□□□□□ -0.38
CD58-204ENST00000464088 TMEM238C9JI98 176 aa12.68□□□□□ -0.38
CD58-204ENST00000464088 PYY3Q5JQD4 70 aa12.67□□□□□ -0.38
CD58-204ENST00000464088 TRBV10-2A0A0K0K1G8 114 aa12.66□□□□□ -0.38
CD58-204ENST00000464088 BCE1O60756 84 aa12.66□□□□□ -0.38
CD58-204ENST00000464088 SPANXB1Q9NS25 103 aaPredicted RBP12.66□□□□□ -0.38
CD58-204ENST00000464088 COX8AP10176 69 aa12.64□□□□□ -0.39
CD58-204ENST00000464088 PAM16Q9Y3D7 125 aa12.64□□□□□ -0.39
CD58-204ENST00000464088 Q6ZVH6 145 aa12.63□□□□□ -0.39
CD58-204ENST00000464088 TMEM126AQ9H061 195 aa12.63□□□□□ -0.39
CD58-204ENST00000464088 PPDPFQ9H3Y8 114 aa12.63□□□□□ -0.39
CD58-204ENST00000464088 TRBV10-3A0A0K0K1G6 114 aa12.62□□□□□ -0.39
CD58-204ENST00000464088 SPATA45Q537H7 98 aa12.62□□□□□ -0.39
CD58-204ENST00000464088 REG3GQ6UW15 175 aa12.62□□□□□ -0.39
CD58-204ENST00000464088 VAMP8Q9BV40 100 aa12.62□□□□□ -0.39
CD58-204ENST00000464088 DLEU1O43261 78 aa12.61□□□□□ -0.39
CD58-204ENST00000464088 ZNF861PO60384 105 aa12.61□□□□□ -0.39
CD58-204ENST00000464088 IFITM1P13164 125 aa12.61□□□□□ -0.39
CD58-204ENST00000464088 KRTAP13-1Q8IUC0 172 aa12.61□□□□□ -0.39
CD58-204ENST00000464088 KCNQ1DNQ9H478 68 aa12.61□□□□□ -0.39
CD58-204ENST00000464088 PRYO14603 147 aa12.59□□□□□ -0.39
CD58-204ENST00000464088 IGLV6-57P01721 117 aa12.59□□□□□ -0.39
CD58-204ENST00000464088 DIRC1Q969H9 104 aa12.59□□□□□ -0.39
CD58-204ENST00000464088 H0Y9J4 135 aa12.58□□□□□ -0.4
CD58-204ENST00000464088 DDTP30046 118 aa12.58□□□□□ -0.4
CD58-204ENST00000464088 SPRR1AP35321 89 aa12.58□□□□□ -0.4
CD58-204ENST00000464088 MUSTN1Q8IVN3 82 aa12.58□□□□□ -0.4
CD58-204ENST00000464088 C14orf144Q96I85 54 aa12.58□□□□□ -0.4
CD58-204ENST00000464088 LINC01600Q96MT4 127 aa12.58□□□□□ -0.4
CD58-204ENST00000464088 RPL28P46779 137 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms