RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 MYCBP2O75592 4640 aa8.5□□□□□ -1.05
SEMA3D-203ENST00000463315 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
SEMA3D-203ENST00000463315 M0QXV9 152 aa8.5□□□□□ -1.05
SEMA3D-203ENST00000463315 LBHQ53QV2 105 aaPredicted RBP8.5□□□□□ -1.05
SEMA3D-203ENST00000463315 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
SEMA3D-203ENST00000463315 PLEKHB2Q96CS7 222 aa8.5□□□□□ -1.05
SEMA3D-203ENST00000463315 KRTAP29-1A8MX34 341 aaPredicted RBP8.49□□□□□ -1.05
SEMA3D-203ENST00000463315 LEPROTO15243 131 aa8.49□□□□□ -1.05
SEMA3D-203ENST00000463315 OXTP01178 125 aa8.49□□□□□ -1.05
SEMA3D-203ENST00000463315 LINC01545Q5VT33 79 aa8.49□□□□□ -1.05
SEMA3D-203ENST00000463315 IGLV5-37A0A075B6J1 123 aa8.48□□□□□ -1.05
SEMA3D-203ENST00000463315 MYMXA0A1B0GTQ4 84 aa8.48□□□□□ -1.05
SEMA3D-203ENST00000463315 PFN2P35080 140 aa8.48□□□□□ -1.05
SEMA3D-203ENST00000463315 NMUP48645 174 aa8.48□□□□□ -1.05
SEMA3D-203ENST00000463315 AKR1D1P51857 326 aa8.48□□□□□ -1.05
SEMA3D-203ENST00000463315 PSORS1C2Q9UIG4 136 aa8.48□□□□□ -1.05
SEMA3D-203ENST00000463315 C22orf24Q9Y442 160 aa8.48□□□□□ -1.05
SEMA3D-203ENST00000463315 HNRNPA3P51991 378 aaKnown RBP8.47□□□□□ -1.05
SEMA3D-203ENST00000463315 SERTAD4-AS1Q5TG53 156 aa8.47□□□□□ -1.05
SEMA3D-203ENST00000463315 SPINK6Q6UWN8 80 aa8.47□□□□□ -1.05
SEMA3D-203ENST00000463315 NDUFA12Q9UI09 145 aa8.47□□□□□ -1.05
SEMA3D-203ENST00000463315 DMBT1Q9UGM3 2413 aaPredicted RBP8.46□□□□□ -1.05
SEMA3D-203ENST00000463315 J3QQQ9 107 aa8.46□□□□□ -1.06
SEMA3D-203ENST00000463315 C3orf79P0CE67 100 aa8.46□□□□□ -1.06
SEMA3D-203ENST00000463315 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
SEMA3D-203ENST00000463315 MRPL55Q7Z7F7 128 aaKnown RBP8.46□□□□□ -1.06
SEMA3D-203ENST00000463315 PMCHL2Q9BQD1 86 aa8.46□□□□□ -1.06
SEMA3D-203ENST00000463315 SND1-IT1Q9HBX3 110 aa8.46□□□□□ -1.06
SEMA3D-203ENST00000463315 E9PLD3 99 aa8.45□□□□□ -1.06
SEMA3D-203ENST00000463315 UBE2BP63146 152 aa8.45□□□□□ -1.06
SEMA3D-203ENST00000463315 RPL24P83731 157 aaKnown RBP8.45□□□□□ -1.06
SEMA3D-203ENST00000463315 LINC00158P58513 81 aa8.44□□□□□ -1.06
SEMA3D-203ENST00000463315 C20orf202A1L168 122 aa8.43□□□□□ -1.06
SEMA3D-203ENST00000463315 LGALS3P17931 250 aaKnown RBP8.43□□□□□ -1.06
SEMA3D-203ENST00000463315 C1orf137Q5JT78 98 aa8.43□□□□□ -1.06
SEMA3D-203ENST00000463315 NKAPP1Q8N9T2 125 aa8.43□□□□□ -1.06
SEMA3D-203ENST00000463315 IGLV7-43P04211 117 aa8.42□□□□□ -1.06
SEMA3D-203ENST00000463315 TSPEAR-AS2P59090 65 aa8.42□□□□□ -1.06
SEMA3D-203ENST00000463315 KRTDAPP60985 99 aa8.42□□□□□ -1.06
SEMA3D-203ENST00000463315 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
SEMA3D-203ENST00000463315 PKHD1L1Q86WI1 4243 aa8.41□□□□□ -1.06
SEMA3D-203ENST00000463315 S100A6P06703 90 aa8.41□□□□□ -1.06
SEMA3D-203ENST00000463315 SMIM13P0DJ93 91 aa8.41□□□□□ -1.06
SEMA3D-203ENST00000463315 VPREB1P12018 145 aa8.41□□□□□ -1.06
SEMA3D-203ENST00000463315 KRTAP11-1Q8IUC1 163 aa8.41□□□□□ -1.06
SEMA3D-203ENST00000463315 HIST3H2BBQ8N257 126 aa8.41□□□□□ -1.06
SEMA3D-203ENST00000463315 LINC00167Q96N53 147 aa8.41□□□□□ -1.06
SEMA3D-203ENST00000463315 LOC107984156A0A0G2JMH3 177 aa8.4□□□□□ -1.06
SEMA3D-203ENST00000463315 S100A2P29034 98 aa8.4□□□□□ -1.06
SEMA3D-203ENST00000463315 REG3GQ6UW15 175 aa8.4□□□□□ -1.06
SEMA3D-203ENST00000463315 ARL17AQ8IVW1 177 aa8.4□□□□□ -1.06
SEMA3D-203ENST00000463315 MIR7-3HGQ8N6C7 128 aa8.39□□□□□ -1.07
SEMA3D-203ENST00000463315 DIRC1Q969H9 104 aa8.39□□□□□ -1.07
SEMA3D-203ENST00000463315 SNRPEP62304 92 aaKnown RBP8.38□□□□□ -1.07
SEMA3D-203ENST00000463315 HIST1H2BLQ99880 126 aa8.38□□□□□ -1.07
SEMA3D-203ENST00000463315 IGKV2D-26A0A0A0MRZ7 120 aa8.37□□□□□ -1.07
SEMA3D-203ENST00000463315 KRTAP4-8A0A0G2JLE6 195 aa8.37□□□□□ -1.07
SEMA3D-203ENST00000463315 A0A0U1RRA0 63 aa8.37□□□□□ -1.07
SEMA3D-203ENST00000463315 LINC01600Q96MT4 127 aa8.37□□□□□ -1.07
SEMA3D-203ENST00000463315 IGLV1-50A0A075B6I6 118 aa8.36□□□□□ -1.07
SEMA3D-203ENST00000463315 M0R378 163 aa8.36□□□□□ -1.07
SEMA3D-203ENST00000463315 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
SEMA3D-203ENST00000463315 ZNF861PO60384 105 aa8.35□□□□□ -1.07
SEMA3D-203ENST00000463315 BCE1O60756 84 aa8.35□□□□□ -1.07
SEMA3D-203ENST00000463315 TIMM17BO60830 172 aa8.35□□□□□ -1.07
SEMA3D-203ENST00000463315 LRP1Q07954 4544 aaKnown RBP8.35□□□□□ -1.07
SEMA3D-203ENST00000463315 GAGE10A6NGK3 116 aa8.34□□□□□ -1.07
SEMA3D-203ENST00000463315 C5orf52A6NGY3 159 aa8.34□□□□□ -1.07
SEMA3D-203ENST00000463315 RPL37AP8A6NKH3 93 aa8.34□□□□□ -1.07
SEMA3D-203ENST00000463315 H0Y9J4 135 aa8.34□□□□□ -1.07
SEMA3D-203ENST00000463315 RPL28P46779 137 aaKnown RBP8.34□□□□□ -1.07
SEMA3D-203ENST00000463315 BOD1L2Q8IYS8 172 aa8.34□□□□□ -1.07
SEMA3D-203ENST00000463315 Q8NDZ9 215 aa8.34□□□□□ -1.07
SEMA3D-203ENST00000463315 NDUFC2O95298 119 aa8.33□□□□□ -1.08
SEMA3D-203ENST00000463315 MIEN1Q9BRT3 115 aa8.33□□□□□ -1.08
SEMA3D-203ENST00000463315 TRBV10-2A0A0K0K1G8 114 aa8.32□□□□□ -1.08
SEMA3D-203ENST00000463315 FAT3Q8TDW7 4589 aa8.32□□□□□ -1.08
SEMA3D-203ENST00000463315 IGKV2-28A0A075B6P5 120 aa8.31□□□□□ -1.08
SEMA3D-203ENST00000463315 ZNF815PA8K554 130 aa8.31□□□□□ -1.08
SEMA3D-203ENST00000463315 IGKV2D-28P01615 120 aa8.31□□□□□ -1.08
SEMA3D-203ENST00000463315 MT1HL1P0DM35 61 aa8.31□□□□□ -1.08
SEMA3D-203ENST00000463315 ADAMTSL4-AS1Q5T5F5 129 aa8.3□□□□□ -1.08
SEMA3D-203ENST00000463315 DAND5Q8N907 189 aa8.3□□□□□ -1.08
SEMA3D-203ENST00000463315 TMEM126AQ9H061 195 aa8.3□□□□□ -1.08
SEMA3D-203ENST00000463315 HERC1Q15751 4861 aa8.3□□□□□ -1.08
SEMA3D-203ENST00000463315 S100A12P80511 92 aa8.29□□□□□ -1.08
SEMA3D-203ENST00000463315 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
SEMA3D-203ENST00000463315 LITAFQ99732 161 aa8.29□□□□□ -1.08
SEMA3D-203ENST00000463315 PPDPFQ9H3Y8 114 aa8.29□□□□□ -1.08
SEMA3D-203ENST00000463315 SPANXB1Q9NS25 103 aaPredicted RBP8.29□□□□□ -1.08
SEMA3D-203ENST00000463315 PRYO14603 147 aa8.28□□□□□ -1.08
SEMA3D-203ENST00000463315 KRTAP10-8P60410 259 aa8.28□□□□□ -1.08
SEMA3D-203ENST00000463315 ANKRD39Q53RE8 183 aa8.28□□□□□ -1.08
SEMA3D-203ENST00000463315 ATOH7Q8N100 152 aa8.28□□□□□ -1.08
SEMA3D-203ENST00000463315 KCNQ1DNQ9H478 68 aa8.28□□□□□ -1.08
SEMA3D-203ENST00000463315 HSBP1L1C9JCN9 74 aa8.27□□□□□ -1.09
SEMA3D-203ENST00000463315 UBE2AP49459 152 aa8.27□□□□□ -1.09
SEMA3D-203ENST00000463315 Q6ZVH6 145 aa8.27□□□□□ -1.09
SEMA3D-203ENST00000463315 COPS9Q8WXC6 57 aa8.27□□□□□ -1.09
SEMA3D-203ENST00000463315 TMEM238C9JI98 176 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms