RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 MIR7-3HGQ8N6C7 128 aa12.03□□□□□ -0.48
XPA-202ENST00000462523 LINC00528Q8N1L1 170 aa12.02□□□□□ -0.49
XPA-202ENST00000462523 DAND5Q8N907 189 aa12.02□□□□□ -0.49
XPA-202ENST00000462523 Q8NDZ9 215 aa12.02□□□□□ -0.49
XPA-202ENST00000462523 LITAFQ99732 161 aa12.01□□□□□ -0.49
XPA-202ENST00000462523 LINC00587B1AMM8 73 aa12.01□□□□□ -0.49
XPA-202ENST00000462523 ADAMTSL4-AS1Q5T5F5 129 aa12.01□□□□□ -0.49
XPA-202ENST00000462523 PHF5AQ7RTV0 110 aaKnown RBP12.01□□□□□ -0.49
XPA-202ENST00000462523 VPS13BQ7Z7G8 4022 aa12□□□□□ -0.49
XPA-202ENST00000462523 PLA2G2DQ9UNK4 145 aa12□□□□□ -0.49
XPA-202ENST00000462523 KRTAP4-5Q9BYR2 181 aa11.99□□□□□ -0.49
XPA-202ENST00000462523 M0QXV9 152 aa11.98□□□□□ -0.49
XPA-202ENST00000462523 SMIM6P0DI80 62 aa11.98□□□□□ -0.49
XPA-202ENST00000462523 Q5VSD8 79 aa11.98□□□□□ -0.49
XPA-202ENST00000462523 SCGB1D4Q6XE38 83 aa11.98□□□□□ -0.49
XPA-202ENST00000462523 SRRM2Q9UQ35 2752 aaKnown RBP11.98□□□□□ -0.49
XPA-202ENST00000462523 COX8AP10176 69 aa11.97□□□□□ -0.49
XPA-202ENST00000462523 S100A12P80511 92 aa11.97□□□□□ -0.49
XPA-202ENST00000462523 C14orf144Q96I85 54 aa11.97□□□□□ -0.49
XPA-202ENST00000462523 TP73-AS1Q9UF72 201 aa11.97□□□□□ -0.49
XPA-202ENST00000462523 C22orf24Q9Y442 160 aa11.97□□□□□ -0.49
XPA-202ENST00000462523 VPREB1P12018 145 aa11.96□□□□□ -0.49
XPA-202ENST00000462523 KRTAP10-4P60372 401 aaPredicted RBP11.96□□□□□ -0.49
XPA-202ENST00000462523 KRTAP11-1Q8IUC1 163 aa11.96□□□□□ -0.49
XPA-202ENST00000462523 IGLV5-37A0A075B6J1 123 aa11.96□□□□□ -0.5
XPA-202ENST00000462523 EIF4EBP3O60516 100 aaPredicted RBP11.96□□□□□ -0.5
XPA-202ENST00000462523 TIMM17BO60830 172 aa11.96□□□□□ -0.5
XPA-202ENST00000462523 BOD1L2Q8IYS8 172 aa11.95□□□□□ -0.5
XPA-202ENST00000462523 LOC107984156A0A0G2JMH3 177 aa11.94□□□□□ -0.5
XPA-202ENST00000462523 SOSTDC1Q6X4U4 206 aa11.94□□□□□ -0.5
XPA-202ENST00000462523 ARL17AQ8IVW1 177 aa11.94□□□□□ -0.5
XPA-202ENST00000462523 LINC00518Q8N0U6 118 aa11.94□□□□□ -0.5
XPA-202ENST00000462523 FAM229AH3BQW9 127 aa11.93□□□□□ -0.5
XPA-202ENST00000462523 C7orf33Q8WU49 177 aa11.93□□□□□ -0.5
XPA-202ENST00000462523 DLEU1O43261 78 aa11.92□□□□□ -0.5
XPA-202ENST00000462523 NPC2P61916 151 aa11.92□□□□□ -0.5
XPA-202ENST00000462523 MRPL55Q7Z7F7 128 aaKnown RBP11.92□□□□□ -0.5
XPA-202ENST00000462523 C12orf57Q99622 126 aa11.92□□□□□ -0.5
XPA-202ENST00000462523 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
XPA-202ENST00000462523 PRR3P79522 188 aaKnown RBP11.91□□□□□ -0.5
XPA-202ENST00000462523 SLC25A34Q6PIV7 304 aa11.91□□□□□ -0.5
XPA-202ENST00000462523 TMEM238C9JI98 176 aa11.9□□□□□ -0.5
XPA-202ENST00000462523 LINC00167Q96N53 147 aa11.9□□□□□ -0.5
XPA-202ENST00000462523 RPL24P83731 157 aaKnown RBP11.89□□□□□ -0.51
XPA-202ENST00000462523 NKAPP1Q8N9T2 125 aa11.89□□□□□ -0.51
XPA-202ENST00000462523 GAGE10A6NGK3 116 aa11.88□□□□□ -0.51
XPA-202ENST00000462523 LINC00308Q8TCZ7 52 aa11.88□□□□□ -0.51
XPA-202ENST00000462523 SPANXDQ9BXN6 97 aa11.88□□□□□ -0.51
XPA-202ENST00000462523 SPANXCQ9NY87 97 aa11.88□□□□□ -0.51
XPA-202ENST00000462523 PSORS1C2Q9UIG4 136 aa11.88□□□□□ -0.51
XPA-202ENST00000462523 PLA2G1BP04054 148 aaKnown RBP11.88□□□□□ -0.51
XPA-202ENST00000462523 ABCA13Q86UQ4 5058 aa11.88□□□□□ -0.51
XPA-202ENST00000462523 LBHQ53QV2 105 aaPredicted RBP11.87□□□□□ -0.51
XPA-202ENST00000462523 MIEN1Q9BRT3 115 aa11.87□□□□□ -0.51
XPA-202ENST00000462523 RPL37AP8A6NKH3 93 aa11.86□□□□□ -0.51
XPA-202ENST00000462523 UBE2BP63146 152 aa11.86□□□□□ -0.51
XPA-202ENST00000462523 NCR3O14931 201 aa11.85□□□□□ -0.51
XPA-202ENST00000462523 HNRNPA3P51991 378 aaKnown RBP11.84□□□□□ -0.51
XPA-202ENST00000462523 SRSF9Q13242 221 aaKnown RBP eCLIP11.84□□□□□ -0.51
XPA-202ENST00000462523 SPANXB1Q9NS25 103 aaPredicted RBP11.84□□□□□ -0.51
XPA-202ENST00000462523 IGLV1-50A0A075B6I6 118 aa11.83□□□□□ -0.52
XPA-202ENST00000462523 IGKV2-28A0A075B6P5 120 aa11.83□□□□□ -0.52
XPA-202ENST00000462523 NDUFC2O95298 119 aa11.83□□□□□ -0.52
XPA-202ENST00000462523 IGKV2D-28P01615 120 aa11.83□□□□□ -0.52
XPA-202ENST00000462523 C2orf91Q6ZV80 131 aa11.83□□□□□ -0.52
XPA-202ENST00000462523 Q6ZVH6 145 aa11.83□□□□□ -0.52
XPA-202ENST00000462523 PRO1933Q9H354 126 aa11.83□□□□□ -0.52
XPA-202ENST00000462523 M0R378 163 aa11.82□□□□□ -0.52
XPA-202ENST00000462523 UQCR10Q9UDW1 63 aa11.82□□□□□ -0.52
XPA-202ENST00000462523 HIGD1BQ9P298 99 aa11.81□□□□□ -0.52
XPA-202ENST00000462523 C1orf137Q5JT78 98 aa11.8□□□□□ -0.52
XPA-202ENST00000462523 MUSTN1Q8IVN3 82 aa11.8□□□□□ -0.52
XPA-202ENST00000462523 IFITM1P13164 125 aa11.79□□□□□ -0.52
XPA-202ENST00000462523 HIST1H4GQ99525 98 aa11.79□□□□□ -0.52
XPA-202ENST00000462523 TRBV10-2A0A0K0K1G8 114 aa11.79□□□□□ -0.52
XPA-202ENST00000462523 COPS9Q8WXC6 57 aa11.79□□□□□ -0.52
XPA-202ENST00000462523 PPDPFQ9H3Y8 114 aa11.79□□□□□ -0.52
XPA-202ENST00000462523 PCLOQ9Y6V0 5065 aa11.77□□□□□ -0.52
XPA-202ENST00000462523 TRBV10-3A0A0K0K1G6 114 aa11.77□□□□□ -0.53
XPA-202ENST00000462523 PKHD1L1Q86WI1 4243 aa11.77□□□□□ -0.53
XPA-202ENST00000462523 IGLV7-43P04211 117 aa11.75□□□□□ -0.53
XPA-202ENST00000462523 TSTD3H0UI37 97 aa11.74□□□□□ -0.53
XPA-202ENST00000462523 IGLV6-57P01721 117 aa11.74□□□□□ -0.53
XPA-202ENST00000462523 TMEM126AQ9H061 195 aa11.74□□□□□ -0.53
XPA-202ENST00000462523 DDTP30046 118 aa11.73□□□□□ -0.53
XPA-202ENST00000462523 LINC00337Q8N6G1 96 aa11.73□□□□□ -0.53
XPA-202ENST00000462523 MYCBP2O75592 4640 aa11.73□□□□□ -0.53
XPA-202ENST00000462523 BCE1O60756 84 aa11.72□□□□□ -0.53
XPA-202ENST00000462523 INAFM2P0DMQ5 153 aa11.72□□□□□ -0.53
XPA-202ENST00000462523 REG3GQ6UW15 175 aa11.72□□□□□ -0.53
XPA-202ENST00000462523 KCNQ1DNQ9H478 68 aa11.72□□□□□ -0.53
XPA-202ENST00000462523 TAL2Q16559 108 aa11.71□□□□□ -0.53
XPA-202ENST00000462523 A4D1N5 150 aa11.7□□□□□ -0.54
XPA-202ENST00000462523 PRYO14603 147 aa11.7□□□□□ -0.54
XPA-202ENST00000462523 S100A7L2Q5SY68 101 aa11.7□□□□□ -0.54
XPA-202ENST00000462523 KRTAP13-1Q8IUC0 172 aa11.7□□□□□ -0.54
XPA-202ENST00000462523 FLG2Q5D862 2391 aaPredicted RBP11.69□□□□□ -0.54
XPA-202ENST00000462523 SPRR1AP35321 89 aa11.69□□□□□ -0.54
XPA-202ENST00000462523 CEND1Q8N111 149 aa11.69□□□□□ -0.54
XPA-202ENST00000462523 HSD52Q0P140 79 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms