RNA–Protein interactions for RNA: ENST00000461004.1

RTN4-212, Transcript of reticulon 4, humanhuman

TSL 3

Gene RTN4, Length 422 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-212ENST00000461004 F8WDY8 70 aa4.57□□□□□ -1.68
RTN4-212ENST00000461004 H3BRM9 83 aa4.57□□□□□ -1.68
RTN4-212ENST00000461004 HSPB8Q9UJY1 196 aa4.57□□□□□ -1.68
RTN4-212ENST00000461004 TLX1NBP0CAT3 122 aa4.56□□□□□ -1.68
RTN4-212ENST00000461004 C9orf129Q5T035 196 aaKnown RBP4.56□□□□□ -1.68
RTN4-212ENST00000461004 ZNF625Q96I27 306 aaPredicted RBP4.56□□□□□ -1.68
RTN4-212ENST00000461004 NDUFC2-KCTD14E9PQ53 114 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 SYS1-DBNDD2H3BUS1 97 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 C3orf79P0CE67 100 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 HNRNPA3P51991 378 aaKnown RBP4.55□□□□□ -1.68
RTN4-212ENST00000461004 TSPEAR-AS2P59090 65 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 SERTAD4-AS1Q5TG53 156 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 PHF5AQ7RTV0 110 aaKnown RBP4.55□□□□□ -1.68
RTN4-212ENST00000461004 KRTAP11-1Q8IUC1 163 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 MAP1LC3CQ9BXW4 147 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 XAGE1AQ9HD64 81 aa4.55□□□□□ -1.68
RTN4-212ENST00000461004 DPM2O94777 84 aa4.54□□□□□ -1.68
RTN4-212ENST00000461004 INAFM2P0DMQ5 153 aa4.54□□□□□ -1.68
RTN4-212ENST00000461004 PFN2P35080 140 aa4.54□□□□□ -1.68
RTN4-212ENST00000461004 CXCL5P42830 114 aa4.54□□□□□ -1.68
RTN4-212ENST00000461004 KRTDAPP60985 99 aa4.54□□□□□ -1.68
RTN4-212ENST00000461004 RPL37AP61513 92 aaKnown RBP4.54□□□□□ -1.68
RTN4-212ENST00000461004 FAM19A5Q7Z5A7 132 aaPredicted RBP4.54□□□□□ -1.68
RTN4-212ENST00000461004 LINC00474Q9P2X8 69 aa4.54□□□□□ -1.68
RTN4-212ENST00000461004 SRRM2Q9UQ35 2752 aaKnown RBP4.53□□□□□ -1.68
RTN4-212ENST00000461004 A0A0U1RRA0 63 aa4.53□□□□□ -1.68
RTN4-212ENST00000461004 IGKCP01834 107 aa4.53□□□□□ -1.68
RTN4-212ENST00000461004 HIST3H2BBQ8N257 126 aa4.53□□□□□ -1.68
RTN4-212ENST00000461004 MYCBP2O75592 4640 aa4.53□□□□□ -1.68
RTN4-212ENST00000461004 FAT3Q8TDW7 4589 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 PLNP26678 52 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 LINC01545Q5VT33 79 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 Q8NDZ9 215 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 HIST1H2BLQ99880 126 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 ERG28Q9UKR5 140 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 PKIGQ9Y2B9 76 aa4.52□□□□□ -1.69
RTN4-212ENST00000461004 LRP1Q07954 4544 aaKnown RBP4.52□□□□□ -1.69
RTN4-212ENST00000461004 LEPROTO15243 131 aa4.51□□□□□ -1.69
RTN4-212ENST00000461004 SNRPEP62304 92 aaKnown RBP4.51□□□□□ -1.69
RTN4-212ENST00000461004 PET117Q6UWS5 81 aa4.51□□□□□ -1.69
RTN4-212ENST00000461004 ATOH7Q8N100 152 aa4.51□□□□□ -1.69
RTN4-212ENST00000461004 IGKV2D-26A0A0A0MRZ7 120 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 SMIM13P0DJ93 91 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 PRR3P79522 188 aaKnown RBP4.5□□□□□ -1.69
RTN4-212ENST00000461004 PRR26Q8N8Z3 221 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 Q8N9P0 234 aaPredicted RBP4.5□□□□□ -1.69
RTN4-212ENST00000461004 C7orf33Q8WU49 177 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 TTTY13Q9BZ97 58 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 SND1-IT1Q9HBX3 110 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 NDUFA12Q9UI09 145 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 C22orf24Q9Y442 160 aa4.5□□□□□ -1.69
RTN4-212ENST00000461004 C5orf52A6NGY3 159 aa4.49□□□□□ -1.69
RTN4-212ENST00000461004 J3QQQ9 107 aa4.49□□□□□ -1.69
RTN4-212ENST00000461004 M0QXV9 152 aa4.49□□□□□ -1.69
RTN4-212ENST00000461004 S100A6P06703 90 aa4.49□□□□□ -1.69
RTN4-212ENST00000461004 LINC00158P58513 81 aa4.49□□□□□ -1.69
RTN4-212ENST00000461004 PLEKHB2Q96CS7 222 aa4.49□□□□□ -1.69
RTN4-212ENST00000461004 PSORS1C2Q9UIG4 136 aa4.49□□□□□ -1.69
RTN4-212ENST00000461004 E9PLD3 99 aa4.48□□□□□ -1.69
RTN4-212ENST00000461004 S100A2P29034 98 aa4.48□□□□□ -1.69
RTN4-212ENST00000461004 HERVK_113P61574 105 aa4.48□□□□□ -1.69
RTN4-212ENST00000461004 MEIG1Q5JSS6 88 aa4.48□□□□□ -1.69
RTN4-212ENST00000461004 MIR7-3HGQ8N6C7 128 aa4.48□□□□□ -1.69
RTN4-212ENST00000461004 DAND5Q8N907 189 aa4.48□□□□□ -1.69
RTN4-212ENST00000461004 MYMXA0A1B0GTQ4 84 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 RPL37AP8A6NKH3 93 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 VPREB1P12018 145 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 LGALS3P17931 250 aaKnown RBP4.47□□□□□ -1.69
RTN4-212ENST00000461004 HERV-K104P63124 156 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 COX17Q14061 63 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 C1orf137Q5JT78 98 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 ADAMTSL4-AS1Q5T5F5 129 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 LINC00167Q96N53 147 aa4.47□□□□□ -1.69
RTN4-212ENST00000461004 TNXBP22105 4242 aa4.46□□□□□ -1.7
RTN4-212ENST00000461004 IGLV5-37A0A075B6J1 123 aa4.46□□□□□ -1.7
RTN4-212ENST00000461004 A0A0J9YXY3 114 aa4.46□□□□□ -1.7
RTN4-212ENST00000461004 UBE2BP63146 152 aa4.46□□□□□ -1.7
RTN4-212ENST00000461004 SRSF9Q13242 221 aaKnown RBP eCLIP4.46□□□□□ -1.7
RTN4-212ENST00000461004 MRPL55Q7Z7F7 128 aaKnown RBP4.46□□□□□ -1.7
RTN4-212ENST00000461004 C20orf202A1L168 122 aa4.45□□□□□ -1.7
RTN4-212ENST00000461004 NPC2P61916 151 aa4.45□□□□□ -1.7
RTN4-212ENST00000461004 SFTA2Q6UW10 78 aa4.45□□□□□ -1.7
RTN4-212ENST00000461004 SOSTDC1Q6X4U4 206 aa4.45□□□□□ -1.7
RTN4-212ENST00000461004 LITAFQ99732 161 aa4.45□□□□□ -1.7
RTN4-212ENST00000461004 IGKV2-28A0A075B6P5 120 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 ZNF815PA8K554 130 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 IGKV2D-28P01615 120 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 IGLV7-43P04211 117 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 NMUP48645 174 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 LBHQ53QV2 105 aaPredicted RBP4.44□□□□□ -1.7
RTN4-212ENST00000461004 PCP2Q8IVA1 136 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 BOD1L2Q8IYS8 172 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 NKAPP1Q8N9T2 125 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 TP73-AS1Q9UF72 201 aa4.44□□□□□ -1.7
RTN4-212ENST00000461004 HERC1Q15751 4861 aa4.43□□□□□ -1.7
RTN4-212ENST00000461004 TMEM238C9JI98 176 aa4.43□□□□□ -1.7
RTN4-212ENST00000461004 NCR3O14931 201 aa4.43□□□□□ -1.7
RTN4-212ENST00000461004 SCGB1D1O95968 90 aa4.43□□□□□ -1.7
RTN4-212ENST00000461004 DMBT1Q9UGM3 2413 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms