RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 ZNF561-AS1K7EIQ3 104 aa9.27□□□□□ -0.93
PTPRN-210ENST00000460801 C15orf56Q8N910 161 aa9.27□□□□□ -0.93
PTPRN-210ENST00000460801 C1orf43Q9BWL3 253 aa9.27□□□□□ -0.93
PTPRN-210ENST00000460801 HIGD2BQ4VC39 106 aa9.27□□□□□ -0.93
PTPRN-210ENST00000460801 NCR3O14931 201 aa9.26□□□□□ -0.93
PTPRN-210ENST00000460801 XGP55808 180 aa9.26□□□□□ -0.93
PTPRN-210ENST00000460801 DNAL4O96015 105 aa9.25□□□□□ -0.93
PTPRN-210ENST00000460801 CAMK2N2Q96S95 79 aa9.25□□□□□ -0.93
PTPRN-210ENST00000460801 LINC00588Q9Y4M8 146 aa9.25□□□□□ -0.93
PTPRN-210ENST00000460801 LECT2O14960 151 aa9.25□□□□□ -0.93
PTPRN-210ENST00000460801 C2orf48Q96LS8 159 aa9.25□□□□□ -0.93
PTPRN-210ENST00000460801 IGKV2D-24A0A075B6R9 120 aa9.24□□□□□ -0.93
PTPRN-210ENST00000460801 SCGB1A1P11684 91 aa9.24□□□□□ -0.93
PTPRN-210ENST00000460801 MT-ATP8P03928 68 aa9.23□□□□□ -0.93
PTPRN-210ENST00000460801 Q6ZRU5 148 aa9.23□□□□□ -0.93
PTPRN-210ENST00000460801 FAM240AA0A1B0GVK7 77 aa9.23□□□□□ -0.93
PTPRN-210ENST00000460801 S100A7L2Q5SY68 101 aa9.23□□□□□ -0.93
PTPRN-210ENST00000460801 F8WDY8 70 aa9.22□□□□□ -0.93
PTPRN-210ENST00000460801 MDFIQ99750 246 aa9.22□□□□□ -0.93
PTPRN-210ENST00000460801 A0A1B0GX51 115 aa9.21□□□□□ -0.93
PTPRN-210ENST00000460801 IGLV6-57P01721 117 aa9.21□□□□□ -0.93
PTPRN-210ENST00000460801 XAGE1AQ9HD64 81 aa9.21□□□□□ -0.93
PTPRN-210ENST00000460801 LINC00167Q96N53 147 aa9.21□□□□□ -0.94
PTPRN-210ENST00000460801 RPL18AQ02543 176 aaKnown RBP9.2□□□□□ -0.94
PTPRN-210ENST00000460801 C6orf99Q4VX62 202 aa9.2□□□□□ -0.94
PTPRN-210ENST00000460801 Q8N814 137 aa9.19□□□□□ -0.94
PTPRN-210ENST00000460801 NDUFC2-KCTD14E9PQ53 114 aa9.19□□□□□ -0.94
PTPRN-210ENST00000460801 SLPIP03973 132 aa9.18□□□□□ -0.94
PTPRN-210ENST00000460801 INAFM2P0DMQ5 153 aa9.18□□□□□ -0.94
PTPRN-210ENST00000460801 UPK3BQ9BT76 320 aa9.18□□□□□ -0.94
PTPRN-210ENST00000460801 ORMDL1Q9P0S3 153 aa9.18□□□□□ -0.94
PTPRN-210ENST00000460801 STAB2Q8WWQ8 2551 aa9.18□□□□□ -0.94
PTPRN-210ENST00000460801 VPREB1P12018 145 aa9.17□□□□□ -0.94
PTPRN-210ENST00000460801 SYCNQ0VAF6 134 aa9.17□□□□□ -0.94
PTPRN-210ENST00000460801 OBSCN-AS1Q96MR7 158 aa9.17□□□□□ -0.94
PTPRN-210ENST00000460801 ACYP1P07311 99 aa9.16□□□□□ -0.94
PTPRN-210ENST00000460801 C9orf129Q5T035 196 aaKnown RBP9.16□□□□□ -0.94
PTPRN-210ENST00000460801 TRBV10-3A0A0K0K1G6 114 aa9.16□□□□□ -0.94
PTPRN-210ENST00000460801 LINC00575Q6W349 94 aa9.15□□□□□ -0.94
PTPRN-210ENST00000460801 Q6ZRP5 223 aa9.15□□□□□ -0.95
PTPRN-210ENST00000460801 COL7A1Q02388 2944 aa9.14□□□□□ -0.95
PTPRN-210ENST00000460801 DNAH9Q9NYC9 4486 aa9.13□□□□□ -0.95
PTPRN-210ENST00000460801 GAGE2EQ4V326 116 aa9.13□□□□□ -0.95
PTPRN-210ENST00000460801 GAGE2DQ9UEU5 116 aa9.13□□□□□ -0.95
PTPRN-210ENST00000460801 TRAV23DV6A0A075B6W5 121 aa9.13□□□□□ -0.95
PTPRN-210ENST00000460801 SNCGO76070 127 aa9.13□□□□□ -0.95
PTPRN-210ENST00000460801 RMI2Q96E14 147 aa9.13□□□□□ -0.95
PTPRN-210ENST00000460801 DNAH1Q9P2D7 4330 aa9.13□□□□□ -0.95
PTPRN-210ENST00000460801 M0R378 163 aa9.12□□□□□ -0.95
PTPRN-210ENST00000460801 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
PTPRN-210ENST00000460801 USP17L23D6RBM5 183 aa9.12□□□□□ -0.95
PTPRN-210ENST00000460801 B9D2Q9BPU9 175 aa9.12□□□□□ -0.95
PTPRN-210ENST00000460801 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
PTPRN-210ENST00000460801 TMEM256-PLSCR3K7ERE1 68 aa9.11□□□□□ -0.95
PTPRN-210ENST00000460801 SDIM1Q6ZPB5 146 aa9.11□□□□□ -0.95
PTPRN-210ENST00000460801 DIRC1Q969H9 104 aa9.11□□□□□ -0.95
PTPRN-210ENST00000460801 C14orf132Q9NPU4 83 aa9.11□□□□□ -0.95
PTPRN-210ENST00000460801 TLX1NBP0CAT3 122 aa9.1□□□□□ -0.95
PTPRN-210ENST00000460801 ZNF73O43830 326 aaPredicted RBP9.09□□□□□ -0.95
PTPRN-210ENST00000460801 TTC32Q5I0X7 151 aa9.09□□□□□ -0.95
PTPRN-210ENST00000460801 GAGE2AQ6NT46 116 aa9.09□□□□□ -0.95
PTPRN-210ENST00000460801 TRBV7-6A0A0J9YX20 115 aa9.08□□□□□ -0.96
PTPRN-210ENST00000460801 Q6Q795 121 aa9.08□□□□□ -0.96
PTPRN-210ENST00000460801 SMCR5Q8TEV8 140 aa9.08□□□□□ -0.96
PTPRN-210ENST00000460801 APLNQ9ULZ1 77 aa9.08□□□□□ -0.96
PTPRN-210ENST00000460801 JMJD7-PLA2G4BH0Y9G9 81 aa9.07□□□□□ -0.96
PTPRN-210ENST00000460801 GAGE2BQ13066 116 aa9.07□□□□□ -0.96
PTPRN-210ENST00000460801 ELOF1P60002 83 aaKnown RBP9.07□□□□□ -0.96
PTPRN-210ENST00000460801 COX7BP24311 80 aa9.06□□□□□ -0.96
PTPRN-210ENST00000460801 LINC00643Q86TS7 51 aa9.05□□□□□ -0.96
PTPRN-210ENST00000460801 KRTAP1-5Q9BYS1 174 aa9.05□□□□□ -0.96
PTPRN-210ENST00000460801 PLA2G2DQ9UNK4 145 aa9.05□□□□□ -0.96
PTPRN-210ENST00000460801 SERTAD4-AS1Q5TG53 156 aa9.04□□□□□ -0.96
PTPRN-210ENST00000460801 DYNC2H1Q8NCM8 4307 aaKnown RBP9.04□□□□□ -0.96
PTPRN-210ENST00000460801 Q6ZQY7 126 aa9.04□□□□□ -0.96
PTPRN-210ENST00000460801 TRBV7-7A0A0K0K1E9 115 aa9.03□□□□□ -0.96
PTPRN-210ENST00000460801 A0A1B0GV72 72 aa9.03□□□□□ -0.96
PTPRN-210ENST00000460801 H3BQ85 93 aa9.03□□□□□ -0.96
PTPRN-210ENST00000460801 CCKP06307 115 aa9.03□□□□□ -0.96
PTPRN-210ENST00000460801 NKAPP1Q8N9T2 125 aa9.03□□□□□ -0.96
PTPRN-210ENST00000460801 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.02□□□□□ -0.97
PTPRN-210ENST00000460801 KCNQ1DNQ9H478 68 aa9.02□□□□□ -0.97
PTPRN-210ENST00000460801 LINC00528Q8N1L1 170 aa9.01□□□□□ -0.97
PTPRN-210ENST00000460801 C7orf33Q8WU49 177 aa9.01□□□□□ -0.97
PTPRN-210ENST00000460801 IGLV5-37A0A075B6J1 123 aa9.01□□□□□ -0.97
PTPRN-210ENST00000460801 UBE2DNLQ8IWF7 75 aa9.01□□□□□ -0.97
PTPRN-210ENST00000460801 NHLRC4P0CG21 123 aaPredicted RBP9□□□□□ -0.97
PTPRN-210ENST00000460801 LINC00846Q9NV44 126 aa9□□□□□ -0.97
PTPRN-210ENST00000460801 IMUPQ9GZP8 106 aa8.99□□□□□ -0.97
PTPRN-210ENST00000460801 LOC107984640A0A0U1RRK4 108 aa8.99□□□□□ -0.97
PTPRN-210ENST00000460801 FAM168BA1KXE4 195 aa8.98□□□□□ -0.97
PTPRN-210ENST00000460801 RBM3P98179 157 aaKnown RBP8.98□□□□□ -0.97
PTPRN-210ENST00000460801 KRTAP7-1Q8IUC3 87 aa8.98□□□□□ -0.97
PTPRN-210ENST00000460801 GHRHP01286 108 aa8.97□□□□□ -0.97
PTPRN-210ENST00000460801 LAMTOR3Q9UHA4 124 aa8.97□□□□□ -0.97
PTPRN-210ENST00000460801 LYSTQ99698 3801 aa8.97□□□□□ -0.97
PTPRN-210ENST00000460801 NDUFV3P56181 108 aaKnown RBP8.97□□□□□ -0.97
PTPRN-210ENST00000460801 LOC110117498A0A087WWA1 95 aa8.96□□□□□ -0.98
PTPRN-210ENST00000460801 NUPR2A6NF83 97 aa8.96□□□□□ -0.98
PTPRN-210ENST00000460801 CSMD3Q7Z407 3707 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms