RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 PRO1933Q9H354 126 aa14.12□□□□□ -0.15
C9orf3-209ENST00000460573 UQCR10Q9UDW1 63 aa14.12□□□□□ -0.15
C9orf3-209ENST00000460573 XAGE1AQ9HD64 81 aa14.11□□□□□ -0.15
C9orf3-209ENST00000460573 ANKRD39Q53RE8 183 aa14.1□□□□□ -0.15
C9orf3-209ENST00000460573 MEIG1Q5JSS6 88 aa14.1□□□□□ -0.15
C9orf3-209ENST00000460573 FLG2Q5D862 2391 aaPredicted RBP14.1□□□□□ -0.15
C9orf3-209ENST00000460573 COX8AP10176 69 aa14.09□□□□□ -0.15
C9orf3-209ENST00000460573 LINC00158P58513 81 aa14.09□□□□□ -0.15
C9orf3-209ENST00000460573 DMBT1Q9UGM3 2413 aaPredicted RBP14.09□□□□□ -0.15
C9orf3-209ENST00000460573 FAM168BA1KXE4 195 aa14.08□□□□□ -0.16
C9orf3-209ENST00000460573 DLEU1O43261 78 aa14.08□□□□□ -0.16
C9orf3-209ENST00000460573 SLC25A34Q6PIV7 304 aa14.08□□□□□ -0.16
C9orf3-209ENST00000460573 FAT1Q14517 4588 aa14.08□□□□□ -0.16
C9orf3-209ENST00000460573 VPS13BQ7Z7G8 4022 aa14.08□□□□□ -0.16
C9orf3-209ENST00000460573 FAM19A5Q7Z5A7 132 aaPredicted RBP14.07□□□□□ -0.16
C9orf3-209ENST00000460573 PLA2G2DQ9UNK4 145 aa14.07□□□□□ -0.16
C9orf3-209ENST00000460573 DDTP30046 118 aa14.06□□□□□ -0.16
C9orf3-209ENST00000460573 C14orf144Q96I85 54 aa14.06□□□□□ -0.16
C9orf3-209ENST00000460573 PCP4L1A6NKN8 68 aa14.05□□□□□ -0.16
C9orf3-209ENST00000460573 SMIM13P0DJ93 91 aa14.05□□□□□ -0.16
C9orf3-209ENST00000460573 SND1-IT1Q9HBX3 110 aa14.05□□□□□ -0.16
C9orf3-209ENST00000460573 RPL37AP61513 92 aaKnown RBP14.04□□□□□ -0.16
C9orf3-209ENST00000460573 BOD1L2Q8IYS8 172 aa14.04□□□□□ -0.16
C9orf3-209ENST00000460573 KRTAP7-1Q8IUC3 87 aa14.03□□□□□ -0.16
C9orf3-209ENST00000460573 SRRM2Q9UQ35 2752 aaKnown RBP14.02□□□□□ -0.16
C9orf3-209ENST00000460573 IGKV2D-26A0A0A0MRZ7 120 aa14.02□□□□□ -0.17
C9orf3-209ENST00000460573 A0A0U1RRA0 63 aa14.02□□□□□ -0.17
C9orf3-209ENST00000460573 M0QXV9 152 aa14.02□□□□□ -0.17
C9orf3-209ENST00000460573 PHF5AQ7RTV0 110 aaKnown RBP14.02□□□□□ -0.17
C9orf3-209ENST00000460573 TP73-AS1Q9UF72 201 aa14.02□□□□□ -0.17
C9orf3-209ENST00000460573 SERTAD4-AS1Q5TG53 156 aa14.01□□□□□ -0.17
C9orf3-209ENST00000460573 A0A0J9YXY3 114 aa14□□□□□ -0.17
C9orf3-209ENST00000460573 LBHQ53QV2 105 aaPredicted RBP14□□□□□ -0.17
C9orf3-209ENST00000460573 MIR7-3HGQ8N6C7 128 aa14□□□□□ -0.17
C9orf3-209ENST00000460573 C22orf24Q9Y442 160 aa14□□□□□ -0.17
C9orf3-209ENST00000460573 IGLV5-37A0A075B6J1 123 aa13.99□□□□□ -0.17
C9orf3-209ENST00000460573 ZNF815PA8K554 130 aa13.99□□□□□ -0.17
C9orf3-209ENST00000460573 RPL24P83731 157 aaKnown RBP13.99□□□□□ -0.17
C9orf3-209ENST00000460573 HNRNPA3P51991 378 aaKnown RBP13.98□□□□□ -0.17
C9orf3-209ENST00000460573 KRTAP10-4P60372 401 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-209ENST00000460573 PCP2Q8IVA1 136 aa13.97□□□□□ -0.17
C9orf3-209ENST00000460573 NKAPP1Q8N9T2 125 aa13.96□□□□□ -0.17
C9orf3-209ENST00000460573 TIMM17BO60830 172 aa13.95□□□□□ -0.18
C9orf3-209ENST00000460573 UBE2BP63146 152 aa13.95□□□□□ -0.18
C9orf3-209ENST00000460573 MRPL55Q7Z7F7 128 aaKnown RBP13.95□□□□□ -0.18
C9orf3-209ENST00000460573 HIGD1BQ9P298 99 aa13.95□□□□□ -0.18
C9orf3-209ENST00000460573 LOC107984156A0A0G2JMH3 177 aa13.94□□□□□ -0.18
C9orf3-209ENST00000460573 PRR3P79522 188 aaKnown RBP13.94□□□□□ -0.18
C9orf3-209ENST00000460573 ARL17AQ8IVW1 177 aa13.94□□□□□ -0.18
C9orf3-209ENST00000460573 TTTY13Q9BZ97 58 aa13.94□□□□□ -0.18
C9orf3-209ENST00000460573 VPREB1P12018 145 aa13.93□□□□□ -0.18
C9orf3-209ENST00000460573 MYCBP2O75592 4640 aa13.91□□□□□ -0.18
C9orf3-209ENST00000460573 DAND5Q8N907 189 aa13.91□□□□□ -0.18
C9orf3-209ENST00000460573 PSORS1C2Q9UIG4 136 aa13.91□□□□□ -0.18
C9orf3-209ENST00000460573 HERC1Q15751 4861 aa13.91□□□□□ -0.18
C9orf3-209ENST00000460573 KRTAP29-1A8MX34 341 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-209ENST00000460573 SCGB1D4Q6XE38 83 aa13.9□□□□□ -0.18
C9orf3-209ENST00000460573 LINC00167Q96N53 147 aa13.9□□□□□ -0.18
C9orf3-209ENST00000460573 ADAMTSL4-AS1Q5T5F5 129 aa13.89□□□□□ -0.19
C9orf3-209ENST00000460573 C2orf91Q6ZV80 131 aa13.89□□□□□ -0.19
C9orf3-209ENST00000460573 CTAG1AP78358 180 aa13.88□□□□□ -0.19
C9orf3-209ENST00000460573 LITAFQ99732 161 aa13.88□□□□□ -0.19
C9orf3-209ENST00000460573 TMEM238C9JI98 176 aa13.87□□□□□ -0.19
C9orf3-209ENST00000460573 C1orf137Q5JT78 98 aa13.86□□□□□ -0.19
C9orf3-209ENST00000460573 KRTAP11-1Q8IUC1 163 aa13.86□□□□□ -0.19
C9orf3-209ENST00000460573 Q8NDZ9 215 aa13.86□□□□□ -0.19
C9orf3-209ENST00000460573 M0R378 163 aa13.85□□□□□ -0.19
C9orf3-209ENST00000460573 TAL2Q16559 108 aa13.85□□□□□ -0.19
C9orf3-209ENST00000460573 GAGE10A6NGK3 116 aa13.84□□□□□ -0.19
C9orf3-209ENST00000460573 NDUFC2O95298 119 aa13.84□□□□□ -0.19
C9orf3-209ENST00000460573 RPL37AP8A6NKH3 93 aa13.83□□□□□ -0.2
C9orf3-209ENST00000460573 M0R143 59 aa13.83□□□□□ -0.2
C9orf3-209ENST00000460573 OXTP01178 125 aa13.83□□□□□ -0.2
C9orf3-209ENST00000460573 HSD52Q0P140 79 aa13.83□□□□□ -0.2
C9orf3-209ENST00000460573 IGLV1-50A0A075B6I6 118 aa13.82□□□□□ -0.2
C9orf3-209ENST00000460573 Q6ZVH6 145 aa13.82□□□□□ -0.2
C9orf3-209ENST00000460573 LINC00308Q8TCZ7 52 aa13.82□□□□□ -0.2
C9orf3-209ENST00000460573 COPS9Q8WXC6 57 aa13.82□□□□□ -0.2
C9orf3-209ENST00000460573 SPANXDQ9BXN6 97 aa13.82□□□□□ -0.2
C9orf3-209ENST00000460573 SPANXCQ9NY87 97 aa13.82□□□□□ -0.2
C9orf3-209ENST00000460573 TRBV10-2A0A0K0K1G8 114 aa13.81□□□□□ -0.2
C9orf3-209ENST00000460573 IGLV7-43P04211 117 aa13.8□□□□□ -0.2
C9orf3-209ENST00000460573 NPC2P61916 151 aa13.8□□□□□ -0.2
C9orf3-209ENST00000460573 SOSTDC1Q6X4U4 206 aa13.8□□□□□ -0.2
C9orf3-209ENST00000460573 SPANXB1Q9NS25 103 aaPredicted RBP13.8□□□□□ -0.2
C9orf3-209ENST00000460573 IFITM1P13164 125 aa13.79□□□□□ -0.2
C9orf3-209ENST00000460573 SPINK6Q6UWN8 80 aa13.79□□□□□ -0.2
C9orf3-209ENST00000460573 IGKV2-28A0A075B6P5 120 aa13.78□□□□□ -0.2
C9orf3-209ENST00000460573 NCR3O14931 201 aa13.78□□□□□ -0.2
C9orf3-209ENST00000460573 IGKV2D-28P01615 120 aa13.78□□□□□ -0.2
C9orf3-209ENST00000460573 SRSF9Q13242 221 aaKnown RBP eCLIP13.78□□□□□ -0.2
C9orf3-209ENST00000460573 PPDPFQ9H3Y8 114 aa13.78□□□□□ -0.2
C9orf3-209ENST00000460573 EIF4EBP3O60516 100 aaPredicted RBP13.76□□□□□ -0.21
C9orf3-209ENST00000460573 HIST1H4GQ99525 98 aa13.76□□□□□ -0.21
C9orf3-209ENST00000460573 BCE1O60756 84 aa13.75□□□□□ -0.21
C9orf3-209ENST00000460573 BVES-AS1Q5T3Y7 98 aa13.74□□□□□ -0.21
C9orf3-209ENST00000460573 SNHG12Q9BXW3 62 aa13.74□□□□□ -0.21
C9orf3-209ENST00000460573 HINT1P49773 126 aaPredicted RBP13.73□□□□□ -0.21
C9orf3-209ENST00000460573 REG3GQ6UW15 175 aa13.73□□□□□ -0.21
C9orf3-209ENST00000460573 CEND1Q8N111 149 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms