RNA–Protein interactions for RNA: ENST00000460558.5

ECHDC1-211, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 301 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-211ENST00000460558 GATD1Q8NB37 220 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 SCGB1C1Q8TD33 95 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 DEDD2Q8WXF8 326 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 TMEM126AQ9H061 195 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 TMEM242Q9NWH2 141 aa1.97□□□□□ -2.09
ECHDC1-211ENST00000460558 TGIF2-C20orf24A0A0A6YYL0 155 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 NDUFB6O95139 128 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 CXorf1O96002 111 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 CKS1BP61024 79 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 IFITM3Q01628 133 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 KRTAP5-4Q6L8H1 288 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 TEX261Q6UWH6 196 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 Q6ZVH6 145 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 ENKURQ8TC29 256 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 RPL39LQ96EH5 51 aaKnown RBP1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 LIMD2Q9BT23 127 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 NKX6-2Q9C056 277 aaPredicted RBP1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 VCX3BQ9H321 246 aa1.96□□□□□ -2.1
ECHDC1-211ENST00000460558 HSBP1L1C9JCN9 74 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 TMEM238C9JI98 176 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 F2Z2F3 143 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 IFNA1P01562 189 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 IGLC6P0CF74 106 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 ATP11AUNQ6ZP68 121 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 Q6ZUT4 128 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 FAM19A3Q7Z5A8 133 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 SLC7A5P1Q8MH63 180 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 VCX3AQ9NNX9 186 aa1.95□□□□□ -2.1
ECHDC1-211ENST00000460558 IGHV6-1A0A0B4J1U7 121 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 FAM236DA0A1B0GTK5 79 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 M0R378 163 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 FAM236CP0DP71 79 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 SPRR2DP22532 72 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 AKR1C3P42330 323 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 DEFA1P59665 94 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 LINC00483Q53H64 154 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 SPRR2FQ96RM1 72 aa1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 RNASE7Q9H1E1 156 aaKnown RBP1.94□□□□□ -2.1
ECHDC1-211ENST00000460558 FXYD6-FXYD2A0A087WZ82 144 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 TRBV6-5A0A0K0K1A5 114 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 FAM240AA0A1B0GVK7 77 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 SCO1O75880 301 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 FCER1GP30273 86 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 IL15RAQ13261 267 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 C5orf47Q569G3 176 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 AKAP14Q86UN6 197 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 STOML3Q8TAV4 291 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 TCEAL7Q9BRU2 100 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 TIMM21Q9BVV7 248 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 ST20Q9HBF5 79 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 TOMM7Q9P0U1 55 aa1.93□□□□□ -2.1
ECHDC1-211ENST00000460558 TRBV27A0A0K0K1C4 114 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 KRTAP9-6A8MVA2 160 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 F8VRH5 84 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 INMT-MINDY4F8WBC2 141 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 HBBP68871 147 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 C9orf153Q5TBE3 101 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 SMIM15Q7Z3B0 74 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 BAGE2Q86Y30 109 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 SPANXA2-OT1Q8N9U9 137 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 SMIM3Q9BZL3 60 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 Q9H521 79 aa1.92□□□□□ -2.1
ECHDC1-211ENST00000460558 A0A1B0GW15 77 aa1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 NAP1L6A6NFF2 107 aa1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 POLR2KP53803 58 aaKnown RBP1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 KRTAP12-2P59991 146 aa1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 PYDC2Q56P42 97 aa1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 Q8IZM0 81 aa1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 SMCR5Q8TEV8 140 aa1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 HSPB11Q9Y547 144 aa1.91□□□□□ -2.1
ECHDC1-211ENST00000460558 CCDC160A6NGH7 325 aa1.9□□□□□ -2.11
ECHDC1-211ENST00000460558 NDUFS5O43920 106 aa1.9□□□□□ -2.11
ECHDC1-211ENST00000460558 CNFNQ9BYD5 112 aa1.9□□□□□ -2.11
ECHDC1-211ENST00000460558 A0A087WXM4 84 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 A8MWP4 228 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 ATP6V0CP27449 155 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 MRPS36P82909 103 aaKnown RBP1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 SERF2P84101 59 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 C10orf91Q5T1B1 145 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 HRCT1Q6UXD1 115 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 C9orf62Q8N4C0 152 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 PSMG3Q9BT73 122 aaPredicted RBP1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 SPANXA1Q9NS26 97 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 CBY1Q9Y3M2 126 aa1.89□□□□□ -2.11
ECHDC1-211ENST00000460558 CTXND1A0A1B0GTU2 59 aa1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 SIX6O95475 246 aa1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 RPL39P62891 51 aaKnown RBP1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 SEC22CQ9BRL7 303 aa1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 MED9Q9NWA0 146 aa1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 RBM12B-AS1Q9P1G2 102 aa1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 PRO0628Q9UI54 55 aa1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 TNFSF18Q9UNG2 199 aa1.88□□□□□ -2.11
ECHDC1-211ENST00000460558 ETDCA0A1B0GVM5 59 aa1.87□□□□□ -2.11
ECHDC1-211ENST00000460558 TCAPO15273 167 aa1.87□□□□□ -2.11
ECHDC1-211ENST00000460558 PET100P0DJ07 73 aa1.87□□□□□ -2.11
ECHDC1-211ENST00000460558 PSMB2P49721 201 aa1.87□□□□□ -2.11
ECHDC1-211ENST00000460558 RAB5BP61020 215 aa1.87□□□□□ -2.11
ECHDC1-211ENST00000460558 CD164Q04900 197 aa1.87□□□□□ -2.11
ECHDC1-211ENST00000460558 C1orf195Q5TG92 126 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 139.6 ms