RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 A0A096LNI7 61 aa7.05□□□□□ -1.28
SMNDC1-203ENST00000460483 IGKV2D-26A0A0A0MRZ7 120 aa7.05□□□□□ -1.28
SMNDC1-203ENST00000460483 COX8AP10176 69 aa7.05□□□□□ -1.28
SMNDC1-203ENST00000460483 LBHQ53QV2 105 aaPredicted RBP7.05□□□□□ -1.28
SMNDC1-203ENST00000460483 Q6ZSA8 131 aa7.05□□□□□ -1.28
SMNDC1-203ENST00000460483 FUSP35637 526 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 SLC25A34Q6PIV7 304 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 BOD1L2Q8IYS8 172 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 MIR7-3HGQ8N6C7 128 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 NKAPP1Q8N9T2 125 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 C7orf33Q8WU49 177 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 SND1-IT1Q9HBX3 110 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 PLA2G2DQ9UNK4 145 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 CBY1Q9Y3M2 126 aa7.04□□□□□ -1.28
SMNDC1-203ENST00000460483 DNAH10Q8IVF4 4471 aa7.03□□□□□ -1.28
SMNDC1-203ENST00000460483 A0A0U1RRA0 63 aa7.03□□□□□ -1.28
SMNDC1-203ENST00000460483 IFITM1P13164 125 aa7.03□□□□□ -1.28
SMNDC1-203ENST00000460483 SRSF9Q13242 221 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMNDC1-203ENST00000460483 PCP2Q8IVA1 136 aa7.03□□□□□ -1.28
SMNDC1-203ENST00000460483 XAGE1AQ9HD64 81 aa7.03□□□□□ -1.28
SMNDC1-203ENST00000460483 A0A087WYN8 130 aa7.02□□□□□ -1.29
SMNDC1-203ENST00000460483 PPDPFQ9H3Y8 114 aa7.02□□□□□ -1.29
SMNDC1-203ENST00000460483 PLAC8Q9NZF1 115 aa7.02□□□□□ -1.29
SMNDC1-203ENST00000460483 TP73-AS1Q9UF72 201 aa7.02□□□□□ -1.29
SMNDC1-203ENST00000460483 CHTF8P0CG12 524 aa7.01□□□□□ -1.29
SMNDC1-203ENST00000460483 CIRBP-AS1Q8TBR5 109 aa7.01□□□□□ -1.29
SMNDC1-203ENST00000460483 SPANXDQ9BXN6 97 aa7.01□□□□□ -1.29
SMNDC1-203ENST00000460483 SPANXCQ9NY87 97 aa7.01□□□□□ -1.29
SMNDC1-203ENST00000460483 FAT2Q9NYQ8 4349 aa7.01□□□□□ -1.29
SMNDC1-203ENST00000460483 LOC107984156A0A0G2JMH3 177 aa7□□□□□ -1.29
SMNDC1-203ENST00000460483 NDUFC2O95298 119 aa7□□□□□ -1.29
SMNDC1-203ENST00000460483 SCXQ7RTU7 201 aa7□□□□□ -1.29
SMNDC1-203ENST00000460483 ARL17AQ8IVW1 177 aa7□□□□□ -1.29
SMNDC1-203ENST00000460483 LINC00518Q8N0U6 118 aa7□□□□□ -1.29
SMNDC1-203ENST00000460483 C14orf144Q96I85 54 aa7□□□□□ -1.29
SMNDC1-203ENST00000460483 SPANXB1Q9NS25 103 aaPredicted RBP7□□□□□ -1.29
SMNDC1-203ENST00000460483 UQCR10Q9UDW1 63 aa7□□□□□ -1.29
SMNDC1-203ENST00000460483 LOC105371267A0A1B0GV96 52 aa6.99□□□□□ -1.29
SMNDC1-203ENST00000460483 M0QXV9 152 aa6.99□□□□□ -1.29
SMNDC1-203ENST00000460483 C9orf129Q5T035 196 aaKnown RBP6.99□□□□□ -1.29
SMNDC1-203ENST00000460483 FAM19A5Q7Z5A7 132 aaPredicted RBP6.99□□□□□ -1.29
SMNDC1-203ENST00000460483 TTTY13Q9BZ97 58 aa6.99□□□□□ -1.29
SMNDC1-203ENST00000460483 FAM30AQ9NZY2 134 aa6.99□□□□□ -1.29
SMNDC1-203ENST00000460483 HIGD1BQ9P298 99 aa6.99□□□□□ -1.29
SMNDC1-203ENST00000460483 TSTD3H0UI37 97 aa6.98□□□□□ -1.29
SMNDC1-203ENST00000460483 UBE2BP63146 152 aa6.98□□□□□ -1.29
SMNDC1-203ENST00000460483 MRPL55Q7Z7F7 128 aaKnown RBP6.98□□□□□ -1.29
SMNDC1-203ENST00000460483 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
SMNDC1-203ENST00000460483 HIST1H4GQ99525 98 aa6.98□□□□□ -1.29
SMNDC1-203ENST00000460483 KRTAP4-5Q9BYR2 181 aa6.98□□□□□ -1.29
SMNDC1-203ENST00000460483 IGLV5-37A0A075B6J1 123 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 TRBV10-2A0A0K0K1G8 114 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 EPM2AB3EWF7 344 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 H3BS24 57 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 M0R378 163 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 TAL2Q16559 108 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 DAND5Q8N907 189 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 C22orf24Q9Y442 160 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 FRAS1Q86XX4 4008 aa6.97□□□□□ -1.29
SMNDC1-203ENST00000460483 A0A1W2PNN7 141 aa6.96□□□□□ -1.3
SMNDC1-203ENST00000460483 ADAMTSL4-AS1Q5T5F5 129 aa6.96□□□□□ -1.3
SMNDC1-203ENST00000460483 LITAFQ99732 161 aa6.96□□□□□ -1.3
SMNDC1-203ENST00000460483 PKD1P98161 4303 aa6.95□□□□□ -1.3
SMNDC1-203ENST00000460483 PANO1I0J062 215 aa6.95□□□□□ -1.3
SMNDC1-203ENST00000460483 PLA2G1BP04054 148 aaKnown RBP6.95□□□□□ -1.3
SMNDC1-203ENST00000460483 XGP55808 180 aa6.95□□□□□ -1.3
SMNDC1-203ENST00000460483 S100A7L2Q5SY68 101 aa6.95□□□□□ -1.3
SMNDC1-203ENST00000460483 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
SMNDC1-203ENST00000460483 C12orf57Q99622 126 aa6.95□□□□□ -1.3
SMNDC1-203ENST00000460483 VPREB1P12018 145 aa6.94□□□□□ -1.3
SMNDC1-203ENST00000460483 TRAV13-2A0A0B4J235 113 aa6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 HNRNPA3P51991 378 aaKnown RBP6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 NPC2P61916 151 aa6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 SERTAD4-AS1Q5TG53 156 aa6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 MUSTN1Q8IVN3 82 aa6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 TMEM126AQ9H061 195 aa6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 HECTD4Q9Y4D8 3996 aa6.93□□□□□ -1.3
SMNDC1-203ENST00000460483 HSD52Q0P140 79 aa6.91□□□□□ -1.3
SMNDC1-203ENST00000460483 PHF5AQ7RTV0 110 aaKnown RBP6.91□□□□□ -1.3
SMNDC1-203ENST00000460483 OR13C6PQ8NH95 151 aa6.91□□□□□ -1.3
SMNDC1-203ENST00000460483 LINC00167Q96N53 147 aa6.91□□□□□ -1.3
SMNDC1-203ENST00000460483 DNAH11Q96DT5 4516 aa6.91□□□□□ -1.3
SMNDC1-203ENST00000460483 A6NDN8 102 aa6.9□□□□□ -1.3
SMNDC1-203ENST00000460483 NCR3O14931 201 aa6.9□□□□□ -1.3
SMNDC1-203ENST00000460483 DDTP30046 118 aa6.9□□□□□ -1.3
SMNDC1-203ENST00000460483 RPL37AP61513 92 aaKnown RBP6.9□□□□□ -1.3
SMNDC1-203ENST00000460483 IGLV1-50A0A075B6I6 118 aa6.89□□□□□ -1.31
SMNDC1-203ENST00000460483 GAGE10A6NGK3 116 aa6.89□□□□□ -1.31
SMNDC1-203ENST00000460483 M0R143 59 aa6.89□□□□□ -1.31
SMNDC1-203ENST00000460483 CEND1Q8N111 149 aa6.89□□□□□ -1.31
SMNDC1-203ENST00000460483 Q8N1X5 172 aa6.89□□□□□ -1.31
SMNDC1-203ENST00000460483 IGKV2-28A0A075B6P5 120 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 A4D1N5 150 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 PRYO14603 147 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 IGKV2D-28P01615 120 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 SMR3BP02814 79 aaPredicted RBP6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 HAMPP81172 84 aa6.88□□□□□ -1.31
SMNDC1-203ENST00000460483 REG3GQ6UW15 175 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms