RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 HERV-K104P63124 156 aa6.29□□□□□ -1.4
VPS45-204ENST00000460366 RPL18AQ02543 176 aaKnown RBP6.29□□□□□ -1.4
VPS45-204ENST00000460366 COX17Q14061 63 aa6.29□□□□□ -1.4
VPS45-204ENST00000460366 C9orf116Q5BN46 136 aaPredicted RBP6.29□□□□□ -1.4
VPS45-204ENST00000460366 LINC00587B1AMM8 73 aa6.28□□□□□ -1.4
VPS45-204ENST00000460366 J3QQQ9 107 aa6.28□□□□□ -1.4
VPS45-204ENST00000460366 NMUP48645 174 aa6.28□□□□□ -1.4
VPS45-204ENST00000460366 Q8N1X5 172 aa6.28□□□□□ -1.4
VPS45-204ENST00000460366 STPG4Q8N801 248 aa6.28□□□□□ -1.4
VPS45-204ENST00000460366 NDUFA12Q9UI09 145 aa6.28□□□□□ -1.4
VPS45-204ENST00000460366 MYMXA0A1B0GTQ4 84 aa6.27□□□□□ -1.41
VPS45-204ENST00000460366 HAMPP81172 84 aa6.27□□□□□ -1.41
VPS45-204ENST00000460366 GAGE2EQ4V326 116 aa6.27□□□□□ -1.41
VPS45-204ENST00000460366 GAGE2DQ9UEU5 116 aa6.27□□□□□ -1.41
VPS45-204ENST00000460366 ERG28Q9UKR5 140 aa6.27□□□□□ -1.41
VPS45-204ENST00000460366 HSPG2P98160 4391 aa6.27□□□□□ -1.41
VPS45-204ENST00000460366 A0A1W2PNN7 141 aa6.26□□□□□ -1.41
VPS45-204ENST00000460366 LGALS3P17931 250 aaKnown RBP6.26□□□□□ -1.41
VPS45-204ENST00000460366 TSPEAR-AS2P59090 65 aa6.25□□□□□ -1.41
VPS45-204ENST00000460366 SMR3BP02814 79 aaPredicted RBP6.24□□□□□ -1.41
VPS45-204ENST00000460366 PFN2P35080 140 aa6.24□□□□□ -1.41
VPS45-204ENST00000460366 C9orf129Q5T035 196 aaKnown RBP6.24□□□□□ -1.41
VPS45-204ENST00000460366 LINC00158P58513 81 aa6.23□□□□□ -1.41
VPS45-204ENST00000460366 C7orf33Q8WU49 177 aa6.23□□□□□ -1.41
VPS45-204ENST00000460366 XAGE1AQ9HD64 81 aa6.23□□□□□ -1.41
VPS45-204ENST00000460366 MEIG1Q5JSS6 88 aa6.22□□□□□ -1.41
VPS45-204ENST00000460366 SND1-IT1Q9HBX3 110 aa6.22□□□□□ -1.41
VPS45-204ENST00000460366 IGKV2D-26A0A0A0MRZ7 120 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 FAM168BA1KXE4 195 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 SCGB1D1O95968 90 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 Q5VSD8 79 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 KRTAP7-1Q8IUC3 87 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 ATOH7Q8N100 152 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 TP73-AS1Q9UF72 201 aa6.21□□□□□ -1.42
VPS45-204ENST00000460366 IGLV5-37A0A075B6J1 123 aa6.2□□□□□ -1.42
VPS45-204ENST00000460366 LOC107984156A0A0G2JMH3 177 aa6.2□□□□□ -1.42
VPS45-204ENST00000460366 A0A0J9YXY3 114 aa6.2□□□□□ -1.42
VPS45-204ENST00000460366 HSBP1L1C9JCN9 74 aa6.2□□□□□ -1.42
VPS45-204ENST00000460366 TIMM17BO60830 172 aa6.2□□□□□ -1.42
VPS45-204ENST00000460366 LBHQ53QV2 105 aaPredicted RBP6.2□□□□□ -1.42
VPS45-204ENST00000460366 FAM19A5Q7Z5A7 132 aaPredicted RBP6.2□□□□□ -1.42
VPS45-204ENST00000460366 ARL17AQ8IVW1 177 aa6.2□□□□□ -1.42
VPS45-204ENST00000460366 TMA7Q9Y2S6 64 aaKnown RBP6.2□□□□□ -1.42
VPS45-204ENST00000460366 FAT1Q14517 4588 aa6.19□□□□□ -1.42
VPS45-204ENST00000460366 ZNF815PA8K554 130 aa6.19□□□□□ -1.42
VPS45-204ENST00000460366 M0QXV9 152 aa6.19□□□□□ -1.42
VPS45-204ENST00000460366 RPL37AP61513 92 aaKnown RBP6.19□□□□□ -1.42
VPS45-204ENST00000460366 RPL24P83731 157 aaKnown RBP6.19□□□□□ -1.42
VPS45-204ENST00000460366 JOSD1Q15040 202 aaPredicted RBP6.19□□□□□ -1.42
VPS45-204ENST00000460366 SERTAD4-AS1Q5TG53 156 aa6.19□□□□□ -1.42
VPS45-204ENST00000460366 MIR7-3HGQ8N6C7 128 aa6.19□□□□□ -1.42
VPS45-204ENST00000460366 C22orf24Q9Y442 160 aa6.19□□□□□ -1.42
VPS45-204ENST00000460366 UBR4Q5T4S7 5183 aa6.18□□□□□ -1.42
VPS45-204ENST00000460366 A0A0U1RRA0 63 aa6.18□□□□□ -1.42
VPS45-204ENST00000460366 KRTAP10-4P60372 401 aaPredicted RBP6.18□□□□□ -1.42
VPS45-204ENST00000460366 PHF5AQ7RTV0 110 aaKnown RBP6.18□□□□□ -1.42
VPS45-204ENST00000460366 VPREB1P12018 145 aa6.17□□□□□ -1.42
VPS45-204ENST00000460366 MRPL55Q7Z7F7 128 aaKnown RBP6.17□□□□□ -1.42
VPS45-204ENST00000460366 NKAPP1Q8N9T2 125 aa6.16□□□□□ -1.42
VPS45-204ENST00000460366 LITAFQ99732 161 aa6.16□□□□□ -1.42
VPS45-204ENST00000460366 TTTY13Q9BZ97 58 aa6.16□□□□□ -1.42
VPS45-204ENST00000460366 PRR3P79522 188 aaKnown RBP6.15□□□□□ -1.42
VPS45-204ENST00000460366 ADAMTSL4-AS1Q5T5F5 129 aa6.15□□□□□ -1.42
VPS45-204ENST00000460366 PCP2Q8IVA1 136 aa6.15□□□□□ -1.42
VPS45-204ENST00000460366 BOD1L2Q8IYS8 172 aa6.15□□□□□ -1.42
VPS45-204ENST00000460366 M0R378 163 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 UBE2BP63146 152 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 SCGB1D4Q6XE38 83 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 Q6ZVH6 145 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 DAND5Q8N907 189 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 LINC00167Q96N53 147 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 MIEN1Q9BRT3 115 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 PPDPFQ9H3Y8 114 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 PSORS1C2Q9UIG4 136 aa6.14□□□□□ -1.43
VPS45-204ENST00000460366 TRBV10-2A0A0K0K1G8 114 aa6.13□□□□□ -1.43
VPS45-204ENST00000460366 TMEM238C9JI98 176 aa6.13□□□□□ -1.43
VPS45-204ENST00000460366 NDUFC2O95298 119 aa6.13□□□□□ -1.43
VPS45-204ENST00000460366 Q8NDZ9 215 aa6.13□□□□□ -1.43
VPS45-204ENST00000460366 COPS9Q8WXC6 57 aa6.13□□□□□ -1.43
VPS45-204ENST00000460366 SPANXDQ9BXN6 97 aa6.13□□□□□ -1.43
VPS45-204ENST00000460366 SPANXCQ9NY87 97 aa6.13□□□□□ -1.43
VPS45-204ENST00000460366 ABCA13Q86UQ4 5058 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 DLEU1O43261 78 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 INAFM2P0DMQ5 153 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 COX8AP10176 69 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 IFITM1P13164 125 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 PYY3Q5JQD4 70 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 SOSTDC1Q6X4U4 206 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 KRTAP11-1Q8IUC1 163 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 LINC00308Q8TCZ7 52 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 VAMP8Q9BV40 100 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
VPS45-204ENST00000460366 IGLV1-50A0A075B6I6 118 aa6.11□□□□□ -1.43
VPS45-204ENST00000460366 C1orf137Q5JT78 98 aa6.11□□□□□ -1.43
VPS45-204ENST00000460366 SPANXB1Q9NS25 103 aaPredicted RBP6.11□□□□□ -1.43
VPS45-204ENST00000460366 HERC1Q15751 4861 aa6.11□□□□□ -1.43
VPS45-204ENST00000460366 GAGE10A6NGK3 116 aa6.1□□□□□ -1.43
VPS45-204ENST00000460366 RPL37AP8A6NKH3 93 aa6.1□□□□□ -1.43
VPS45-204ENST00000460366 SRSF9Q13242 221 aaKnown RBP eCLIP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms