RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 C22orf24Q9Y442 160 aa6.78□□□□□ -1.32
CCDC12-204ENST00000460035 SRRM2Q9UQ35 2752 aaKnown RBP6.78□□□□□ -1.32
CCDC12-204ENST00000460035 IGKV2D-26A0A0A0MRZ7 120 aa6.77□□□□□ -1.33
CCDC12-204ENST00000460035 KRTAP10-4P60372 401 aaPredicted RBP6.77□□□□□ -1.33
CCDC12-204ENST00000460035 UBE2BP63146 152 aa6.77□□□□□ -1.33
CCDC12-204ENST00000460035 PLA2G2DQ9UNK4 145 aa6.77□□□□□ -1.33
CCDC12-204ENST00000460035 HSBP1L1C9JCN9 74 aa6.76□□□□□ -1.33
CCDC12-204ENST00000460035 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
CCDC12-204ENST00000460035 ANKRD39Q53RE8 183 aa6.76□□□□□ -1.33
CCDC12-204ENST00000460035 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
CCDC12-204ENST00000460035 NKAPP1Q8N9T2 125 aa6.76□□□□□ -1.33
CCDC12-204ENST00000460035 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
CCDC12-204ENST00000460035 ZNF815PA8K554 130 aa6.75□□□□□ -1.33
CCDC12-204ENST00000460035 RPL24P83731 157 aaKnown RBP6.75□□□□□ -1.33
CCDC12-204ENST00000460035 DAND5Q8N907 189 aa6.75□□□□□ -1.33
CCDC12-204ENST00000460035 TP73-AS1Q9UF72 201 aa6.75□□□□□ -1.33
CCDC12-204ENST00000460035 ABCA13Q86UQ4 5058 aa6.75□□□□□ -1.33
CCDC12-204ENST00000460035 IGLV5-37A0A075B6J1 123 aa6.74□□□□□ -1.33
CCDC12-204ENST00000460035 GAGE10A6NGK3 116 aa6.74□□□□□ -1.33
CCDC12-204ENST00000460035 PRR3P79522 188 aaKnown RBP6.74□□□□□ -1.33
CCDC12-204ENST00000460035 MRPL55Q7Z7F7 128 aaKnown RBP6.74□□□□□ -1.33
CCDC12-204ENST00000460035 TTTY13Q9BZ97 58 aa6.74□□□□□ -1.33
CCDC12-204ENST00000460035 KRTAP11-1Q8IUC1 163 aa6.73□□□□□ -1.33
CCDC12-204ENST00000460035 BOD1L2Q8IYS8 172 aa6.73□□□□□ -1.33
CCDC12-204ENST00000460035 LINC00167Q96N53 147 aa6.73□□□□□ -1.33
CCDC12-204ENST00000460035 PSORS1C2Q9UIG4 136 aa6.73□□□□□ -1.33
CCDC12-204ENST00000460035 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
CCDC12-204ENST00000460035 VPREB1P12018 145 aa6.72□□□□□ -1.33
CCDC12-204ENST00000460035 NPC2P61916 151 aa6.72□□□□□ -1.33
CCDC12-204ENST00000460035 C1orf137Q5JT78 98 aa6.72□□□□□ -1.33
CCDC12-204ENST00000460035 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
CCDC12-204ENST00000460035 LCE2DQ5TA82 110 aaPredicted RBP6.72□□□□□ -1.33
CCDC12-204ENST00000460035 SCGB1D4Q6XE38 83 aa6.71□□□□□ -1.34
CCDC12-204ENST00000460035 PCP2Q8IVA1 136 aa6.71□□□□□ -1.34
CCDC12-204ENST00000460035 MIEN1Q9BRT3 115 aa6.71□□□□□ -1.34
CCDC12-204ENST00000460035 LOC107984156A0A0G2JMH3 177 aa6.7□□□□□ -1.34
CCDC12-204ENST00000460035 TIMM17BO60830 172 aa6.7□□□□□ -1.34
CCDC12-204ENST00000460035 HNRNPA3P51991 378 aaKnown RBP6.7□□□□□ -1.34
CCDC12-204ENST00000460035 ARL17AQ8IVW1 177 aa6.7□□□□□ -1.34
CCDC12-204ENST00000460035 Q8NDZ9 215 aa6.7□□□□□ -1.34
CCDC12-204ENST00000460035 PKHD1L1Q86WI1 4243 aa6.7□□□□□ -1.34
CCDC12-204ENST00000460035 NCR3O14931 201 aa6.69□□□□□ -1.34
CCDC12-204ENST00000460035 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
CCDC12-204ENST00000460035 IGKV2-28A0A075B6P5 120 aa6.68□□□□□ -1.34
CCDC12-204ENST00000460035 M0R378 163 aa6.68□□□□□ -1.34
CCDC12-204ENST00000460035 IGKV2D-28P01615 120 aa6.68□□□□□ -1.34
CCDC12-204ENST00000460035 JOSD1Q15040 202 aaPredicted RBP6.68□□□□□ -1.34
CCDC12-204ENST00000460035 LITAFQ99732 161 aa6.68□□□□□ -1.34
CCDC12-204ENST00000460035 TMEM238C9JI98 176 aa6.67□□□□□ -1.34
CCDC12-204ENST00000460035 IGLV7-43P04211 117 aa6.67□□□□□ -1.34
CCDC12-204ENST00000460035 LINC00308Q8TCZ7 52 aa6.67□□□□□ -1.34
CCDC12-204ENST00000460035 IGLV1-50A0A075B6I6 118 aa6.66□□□□□ -1.34
CCDC12-204ENST00000460035 EIF4EBP3O60516 100 aaPredicted RBP6.66□□□□□ -1.34
CCDC12-204ENST00000460035 SPINK6Q6UWN8 80 aa6.66□□□□□ -1.34
CCDC12-204ENST00000460035 SOSTDC1Q6X4U4 206 aa6.66□□□□□ -1.34
CCDC12-204ENST00000460035 SRSF9Q13242 221 aaKnown RBP eCLIP6.65□□□□□ -1.34
CCDC12-204ENST00000460035 SPATA45Q537H7 98 aa6.65□□□□□ -1.34
CCDC12-204ENST00000460035 VAMP8Q9BV40 100 aa6.65□□□□□ -1.34
CCDC12-204ENST00000460035 PAM16Q9Y3D7 125 aa6.65□□□□□ -1.34
CCDC12-204ENST00000460035 BCE1O60756 84 aa6.64□□□□□ -1.35
CCDC12-204ENST00000460035 NDUFC2O95298 119 aa6.64□□□□□ -1.35
CCDC12-204ENST00000460035 REG3GQ6UW15 175 aa6.64□□□□□ -1.35
CCDC12-204ENST00000460035 SPANXB1Q9NS25 103 aaPredicted RBP6.64□□□□□ -1.35
CCDC12-204ENST00000460035 DMBT1Q9UGM3 2413 aaPredicted RBP6.64□□□□□ -1.35
CCDC12-204ENST00000460035 TRBV10-2A0A0K0K1G8 114 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 COX8AP10176 69 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 UBE2AP49459 152 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 S100A12P80511 92 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 PYY3Q5JQD4 70 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 Q6ZVH6 145 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 C14orf144Q96I85 54 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 PPDPFQ9H3Y8 114 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 SPANXCQ9NY87 97 aa6.63□□□□□ -1.35
CCDC12-204ENST00000460035 TRBV10-3A0A0K0K1G6 114 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 ZNF861PO60384 105 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 IFITM1P13164 125 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 DDTP30046 118 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 RPL28P46779 137 aaKnown RBP6.62□□□□□ -1.35
CCDC12-204ENST00000460035 FAM19A1Q7Z5A9 133 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 MUSTN1Q8IVN3 82 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 OR13C6PQ8NH95 151 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 DIRC1Q969H9 104 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
CCDC12-204ENST00000460035 J3QL48 77 aa6.6□□□□□ -1.35
CCDC12-204ENST00000460035 PRYO14603 147 aa6.6□□□□□ -1.35
CCDC12-204ENST00000460035 DLEU1O43261 78 aa6.6□□□□□ -1.35
CCDC12-204ENST00000460035 LINC00518Q8N0U6 118 aa6.6□□□□□ -1.35
CCDC12-204ENST00000460035 KCNQ1DNQ9H478 68 aa6.6□□□□□ -1.35
CCDC12-204ENST00000460035 MYCBP2O75592 4640 aa6.59□□□□□ -1.35
CCDC12-204ENST00000460035 H0Y9J4 135 aa6.59□□□□□ -1.35
CCDC12-204ENST00000460035 OXTP01178 125 aa6.59□□□□□ -1.35
CCDC12-204ENST00000460035 PRLHP81277 87 aa6.59□□□□□ -1.35
CCDC12-204ENST00000460035 SLC25A34Q6PIV7 304 aa6.59□□□□□ -1.35
CCDC12-204ENST00000460035 ETDCA0A1B0GVM5 59 aa6.58□□□□□ -1.36
CCDC12-204ENST00000460035 KRTAP29-1A8MX34 341 aaPredicted RBP6.58□□□□□ -1.36
CCDC12-204ENST00000460035 IGLV6-57P01721 117 aa6.58□□□□□ -1.36
CCDC12-204ENST00000460035 KRTAP13-1Q8IUC0 172 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms