RNA–Protein interactions for RNA: ENST00000459963.5

NCSTN-209, Transcript of nicastrin, human

TSL 5

Gene NCSTN, Length 1,246 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCSTN-209	ENST00000459963	HIGD1C	A8MV81	97 aa		4.1	□□□□□ -1.75
NCSTN-209	ENST00000459963	MRPL55	Q7Z7F7	128 aa	Known RBP	4.1	□□□□□ -1.75
NCSTN-209	ENST00000459963	GNB1L	Q9BYB4	327 aa		4.1	□□□□□ -1.75
NCSTN-209	ENST00000459963		A0A1B0GUT8	65 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	SMIM27	A0A1W2PRY6	76 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	RPL37AP8	A6NKH3	93 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	NDUFC2-KCTD14	E9PQ53	114 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BK	O60814	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	TRGC2	P03986	189 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	S100A6	P06703	90 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BJ	P06899	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BO	P23527	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BB	P33778	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BD	P58876	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BC	P62807	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	RIG	Q13278	110 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST2H2BE	Q16778	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	COA6	Q5JTJ3	125 aa	Known RBP	4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	C2orf82	Q6UX34	121 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BH	Q93079	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	FAM104A	Q969W3	186 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BN	Q99877	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	HIST1H2BM	Q99879	126 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	TMEM191A	Q9H0A3	160 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	TP73-AS1	Q9UF72	201 aa		4.09	□□□□□ -1.75
NCSTN-209	ENST00000459963	VCY	O14598	125 aa		4.08	□□□□□ -1.76
NCSTN-209	ENST00000459963	KRTAP10-7	P60409	375 aa	Predicted RBP	4.08	□□□□□ -1.76
NCSTN-209	ENST00000459963	ZC2HC1B	Q5TFG8	222 aa		4.08	□□□□□ -1.76
NCSTN-209	ENST00000459963	LINC00469	Q8N7U9	141 aa		4.08	□□□□□ -1.76
NCSTN-209	ENST00000459963	PLEKHB2	Q96CS7	222 aa		4.08	□□□□□ -1.76
NCSTN-209	ENST00000459963	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.07	□□□□□ -1.76
NCSTN-209	ENST00000459963	IFITM10	A6NMD0	228 aa		4.07	□□□□□ -1.76
NCSTN-209	ENST00000459963	TCAP	O15273	167 aa		4.07	□□□□□ -1.76
NCSTN-209	ENST00000459963	PPP1R17	O96001	155 aa		4.07	□□□□□ -1.76
NCSTN-209	ENST00000459963	SNRPE	P62304	92 aa	Known RBP	4.07	□□□□□ -1.76
NCSTN-209	ENST00000459963	MRPL51	Q4U2R6	128 aa	Known RBP	4.07	□□□□□ -1.76
NCSTN-209	ENST00000459963	PPBP	P02775	128 aa		4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	G0S2	P27469	103 aa		4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	RPL37	P61927	97 aa	Known RBP	4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	PRLH	P81277	87 aa		4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	FABP9	Q0Z7S8	132 aa		4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	KIAA0087	Q14695	138 aa		4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	LINC00167	Q96N53	147 aa		4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	CSDC2	Q9Y534	153 aa	Known RBP	4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963	TRAPPC1	Q9Y5R8	145 aa		4.06	□□□□□ -1.76
NCSTN-209	ENST00000459963		A0A1B0GXF2	115 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	LINC01549	A6NIU2	74 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	PRY	O14603	147 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	SPRR2E	P22531	72 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	SPRR2B	P35325	72 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	SPRR2A	P35326	72 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	AKR1D1	P51857	326 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	NDUFA6	P56556	154 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	TMEM136	Q6ZRR5	245 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	LINC00518	Q8N0U6	118 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	HIST3H2BB	Q8N257	126 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	XAGE1A	Q9HD64	81 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	LAMTOR2	Q9Y2Q5	125 aa		4.05	□□□□□ -1.76
NCSTN-209	ENST00000459963	TRBV30	A0A0K0K1B3	111 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	C20orf202	A1L168	122 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	NPY	P01303	97 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	SMIM6	P0DI80	62 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	HBB	P68871	147 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	FAM104B	Q5XKR9	115 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	MRPL54	Q6P161	138 aa	Known RBP	4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	TIMM21	Q9BVV7	248 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963	TOMM7	Q9P0U1	55 aa		4.04	□□□□□ -1.76
NCSTN-209	ENST00000459963		D6R8Y8	96 aa		4.03	□□□□□ -1.76
NCSTN-209	ENST00000459963		K7EMI3	77 aa		4.03	□□□□□ -1.76
NCSTN-209	ENST00000459963	IGLV6-57	P01721	117 aa		4.03	□□□□□ -1.76
NCSTN-209	ENST00000459963	CKS2	P33552	79 aa		4.03	□□□□□ -1.76
NCSTN-209	ENST00000459963	SMAGP	Q0VAQ4	97 aa		4.03	□□□□□ -1.76
NCSTN-209	ENST00000459963	TMEM18	Q96B42	140 aa		4.03	□□□□□ -1.76
NCSTN-209	ENST00000459963	SMIM2	Q9BVW6	85 aa		4.03	□□□□□ -1.76
NCSTN-209	ENST00000459963	IGLV4-3	A0A075B6K6	122 aa		4.02	□□□□□ -1.77
NCSTN-209	ENST00000459963	GAGE10	A6NGK3	116 aa		4.02	□□□□□ -1.77
NCSTN-209	ENST00000459963	S100A2	P29034	98 aa		4.02	□□□□□ -1.77
NCSTN-209	ENST00000459963	SPRR4	Q96PI1	79 aa		4.02	□□□□□ -1.77
NCSTN-209	ENST00000459963	HIST1H2BL	Q99880	126 aa		4.02	□□□□□ -1.77
NCSTN-209	ENST00000459963	SPANXA1	Q9NS26	97 aa		4.02	□□□□□ -1.77
NCSTN-209	ENST00000459963	LOC389332	A0A1B0GUA5	103 aa		4.01	□□□□□ -1.77
NCSTN-209	ENST00000459963	MRPS36	P82909	103 aa	Known RBP	4.01	□□□□□ -1.77
NCSTN-209	ENST00000459963	FAM19A1	Q7Z5A9	133 aa		4.01	□□□□□ -1.77
NCSTN-209	ENST00000459963	CHCHD1	Q96BP2	118 aa	Known RBP	4.01	□□□□□ -1.77
NCSTN-209	ENST00000459963	C20orf78	Q9BR46	151 aa		4.01	□□□□□ -1.77
NCSTN-209	ENST00000459963	PRSS47	A8MTI9	375 aa		4	□□□□□ -1.77
NCSTN-209	ENST00000459963	MT3	P25713	68 aa		4	□□□□□ -1.77
NCSTN-209	ENST00000459963	IFI27	P40305	119 aa	Predicted RBP	4	□□□□□ -1.77
NCSTN-209	ENST00000459963	PYY3	Q5JQD4	70 aa		4	□□□□□ -1.77
NCSTN-209	ENST00000459963	BAGE3	Q86Y29	109 aa		4	□□□□□ -1.77
NCSTN-209	ENST00000459963	ORMDL3	Q8N138	153 aa		4	□□□□□ -1.77
NCSTN-209	ENST00000459963	C12orf57	Q99622	126 aa		4	□□□□□ -1.77
NCSTN-209	ENST00000459963	ALKBH7	Q9BT30	221 aa	Predicted RBP	4	□□□□□ -1.77
NCSTN-209	ENST00000459963	PRSS2	P07478	247 aa		3.99	□□□□□ -1.77
NCSTN-209	ENST00000459963	LINC00614	P0C842	121 aa		3.99	□□□□□ -1.77
NCSTN-209	ENST00000459963	FABP4	P15090	132 aa		3.99	□□□□□ -1.77
NCSTN-209	ENST00000459963	CKS1B	P61024	79 aa		3.99	□□□□□ -1.77
NCSTN-209	ENST00000459963	RPL32	P62910	135 aa	Known RBP	3.99	□□□□□ -1.77
NCSTN-209	ENST00000459963	JOSD1	Q15040	202 aa	Predicted RBP	3.99	□□□□□ -1.77

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