RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 LEPROTO15243 131 aa6.96□□□□□ -1.3
PRAMEF35P-201ENST00000458709 SRSF9Q13242 221 aaKnown RBP eCLIP6.96□□□□□ -1.3
PRAMEF35P-201ENST00000458709 COX17Q14061 63 aa6.96□□□□□ -1.3
PRAMEF35P-201ENST00000458709 STPG4Q8N801 248 aa6.96□□□□□ -1.3
PRAMEF35P-201ENST00000458709 PLEKHB2Q96CS7 222 aa6.96□□□□□ -1.3
PRAMEF35P-201ENST00000458709 CAMK2N2Q96S95 79 aa6.96□□□□□ -1.3
PRAMEF35P-201ENST00000458709 C6orf48Q9UBA6 75 aa6.96□□□□□ -1.3
PRAMEF35P-201ENST00000458709 PRSS2P07478 247 aa6.95□□□□□ -1.3
PRAMEF35P-201ENST00000458709 HERV-K104P63124 156 aa6.95□□□□□ -1.3
PRAMEF35P-201ENST00000458709 C6orf226Q5I0X4 101 aa6.95□□□□□ -1.3
PRAMEF35P-201ENST00000458709 J3QQQ9 107 aa6.94□□□□□ -1.3
PRAMEF35P-201ENST00000458709 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
PRAMEF35P-201ENST00000458709 CKS1BP61024 79 aa6.94□□□□□ -1.3
PRAMEF35P-201ENST00000458709 C10orf25Q5T742 122 aa6.94□□□□□ -1.3
PRAMEF35P-201ENST00000458709 UNQ6190/PRO20217Q6UXQ8 127 aa6.94□□□□□ -1.3
PRAMEF35P-201ENST00000458709 A0A096LNI7 61 aa6.93□□□□□ -1.3
PRAMEF35P-201ENST00000458709 A0A0U1RQV1 116 aa6.93□□□□□ -1.3
PRAMEF35P-201ENST00000458709 NDUFC2-KCTD14E9PQ53 114 aa6.93□□□□□ -1.3
PRAMEF35P-201ENST00000458709 PYY3Q5JQD4 70 aa6.93□□□□□ -1.3
PRAMEF35P-201ENST00000458709 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
PRAMEF35P-201ENST00000458709 LINC00526Q96FQ7 95 aa6.93□□□□□ -1.3
PRAMEF35P-201ENST00000458709 LINC00474Q9P2X8 69 aa6.93□□□□□ -1.3
PRAMEF35P-201ENST00000458709 LINC00587B1AMM8 73 aa6.92□□□□□ -1.3
PRAMEF35P-201ENST00000458709 PPDPFQ9H3Y8 114 aa6.92□□□□□ -1.3
PRAMEF35P-201ENST00000458709 NDUFA12Q9UI09 145 aa6.92□□□□□ -1.3
PRAMEF35P-201ENST00000458709 IGKV2D-26A0A0A0MRZ7 120 aa6.91□□□□□ -1.3
PRAMEF35P-201ENST00000458709 LOC107984156A0A0G2JMH3 177 aa6.91□□□□□ -1.3
PRAMEF35P-201ENST00000458709 LOC107984640A0A0U1RRK4 108 aa6.91□□□□□ -1.3
PRAMEF35P-201ENST00000458709 MYMXA0A1B0GTQ4 84 aa6.91□□□□□ -1.3
PRAMEF35P-201ENST00000458709 Q6ZRP5 223 aa6.91□□□□□ -1.3
PRAMEF35P-201ENST00000458709 ARL17AQ8IVW1 177 aa6.91□□□□□ -1.3
PRAMEF35P-201ENST00000458709 TOMM7Q9P0U1 55 aa6.91□□□□□ -1.3
PRAMEF35P-201ENST00000458709 LOC100996750A0A140TA64 210 aa6.9□□□□□ -1.3
PRAMEF35P-201ENST00000458709 TIMM17BO60830 172 aa6.9□□□□□ -1.3
PRAMEF35P-201ENST00000458709 SCGB1D1O95968 90 aa6.9□□□□□ -1.3
PRAMEF35P-201ENST00000458709 PTTG1IPP53801 180 aa6.9□□□□□ -1.3
PRAMEF35P-201ENST00000458709 KRTAP4-6Q9BYQ5 205 aa6.9□□□□□ -1.3
PRAMEF35P-201ENST00000458709 DLEU1O43261 78 aa6.89□□□□□ -1.31
PRAMEF35P-201ENST00000458709 ERG28Q9UKR5 140 aa6.89□□□□□ -1.31
PRAMEF35P-201ENST00000458709 LOC105371267A0A1B0GV96 52 aa6.88□□□□□ -1.31
PRAMEF35P-201ENST00000458709 HSBP1L1C9JCN9 74 aa6.88□□□□□ -1.31
PRAMEF35P-201ENST00000458709 SMIM6P0DI80 62 aa6.88□□□□□ -1.31
PRAMEF35P-201ENST00000458709 LGALS3P17931 250 aaKnown RBP6.88□□□□□ -1.31
PRAMEF35P-201ENST00000458709 ATOH7Q8N100 152 aa6.88□□□□□ -1.31
PRAMEF35P-201ENST00000458709 LITAFQ99732 161 aa6.88□□□□□ -1.31
PRAMEF35P-201ENST00000458709 A0A0J9YXY3 114 aa6.87□□□□□ -1.31
PRAMEF35P-201ENST00000458709 PRR26Q8N8Z3 221 aa6.87□□□□□ -1.31
PRAMEF35P-201ENST00000458709 C9orf116Q5BN46 136 aaPredicted RBP6.86□□□□□ -1.31
PRAMEF35P-201ENST00000458709 BOD1L2Q8IYS8 172 aa6.86□□□□□ -1.31
PRAMEF35P-201ENST00000458709 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
PRAMEF35P-201ENST00000458709 IGLV5-37A0A075B6J1 123 aa6.85□□□□□ -1.31
PRAMEF35P-201ENST00000458709 COX8AP10176 69 aa6.85□□□□□ -1.31
PRAMEF35P-201ENST00000458709 Q6ZVH6 145 aa6.85□□□□□ -1.31
PRAMEF35P-201ENST00000458709 VAMP8Q9BV40 100 aa6.85□□□□□ -1.31
PRAMEF35P-201ENST00000458709 ZNF815PA8K554 130 aa6.84□□□□□ -1.31
PRAMEF35P-201ENST00000458709 PRR4Q16378 134 aa6.84□□□□□ -1.31
PRAMEF35P-201ENST00000458709 C9orf129Q5T035 196 aaKnown RBP6.84□□□□□ -1.31
PRAMEF35P-201ENST00000458709 PCP2Q8IVA1 136 aa6.84□□□□□ -1.31
PRAMEF35P-201ENST00000458709 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
PRAMEF35P-201ENST00000458709 KRTAP7-1Q8IUC3 87 aa6.83□□□□□ -1.32
PRAMEF35P-201ENST00000458709 SPANXDQ9BXN6 97 aa6.83□□□□□ -1.32
PRAMEF35P-201ENST00000458709 SPANXCQ9NY87 97 aa6.83□□□□□ -1.32
PRAMEF35P-201ENST00000458709 TP73-AS1Q9UF72 201 aa6.83□□□□□ -1.32
PRAMEF35P-201ENST00000458709 MEIG1Q5JSS6 88 aa6.82□□□□□ -1.32
PRAMEF35P-201ENST00000458709 TTTY13Q9BZ97 58 aa6.82□□□□□ -1.32
PRAMEF35P-201ENST00000458709 SPANXB1Q9NS25 103 aaPredicted RBP6.82□□□□□ -1.32
PRAMEF35P-201ENST00000458709 TMEM238C9JI98 176 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 NDUFC2O95298 119 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 SMIM13P0DJ93 91 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 RPL18AQ02543 176 aaKnown RBP6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 SPATA45Q537H7 98 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 ADAMTSL4-AS1Q5T5F5 129 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 HIGD1BQ9P298 99 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 PAM16Q9Y3D7 125 aa6.81□□□□□ -1.32
PRAMEF35P-201ENST00000458709 IFITM1P13164 125 aa6.8□□□□□ -1.32
PRAMEF35P-201ENST00000458709 PFN2P35080 140 aa6.8□□□□□ -1.32
PRAMEF35P-201ENST00000458709 A0A1W2PNN7 141 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 VPREB1P12018 145 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 LINC00158P58513 81 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 S100A12P80511 92 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 GAGE2BQ13066 116 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 C1orf137Q5JT78 98 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 COPS9Q8WXC6 57 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 XAGE1AQ9HD64 81 aa6.79□□□□□ -1.32
PRAMEF35P-201ENST00000458709 TRBV10-2A0A0K0K1G8 114 aa6.78□□□□□ -1.32
PRAMEF35P-201ENST00000458709 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
PRAMEF35P-201ENST00000458709 GAGE2EQ4V326 116 aa6.78□□□□□ -1.32
PRAMEF35P-201ENST00000458709 SLC25A34Q6PIV7 304 aa6.78□□□□□ -1.32
PRAMEF35P-201ENST00000458709 SCGB1D4Q6XE38 83 aa6.78□□□□□ -1.32
PRAMEF35P-201ENST00000458709 GAGE2DQ9UEU5 116 aa6.78□□□□□ -1.32
PRAMEF35P-201ENST00000458709 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
PRAMEF35P-201ENST00000458709 SOSTDC1Q6X4U4 206 aa6.77□□□□□ -1.33
PRAMEF35P-201ENST00000458709 C2orf91Q6ZV80 131 aa6.77□□□□□ -1.33
PRAMEF35P-201ENST00000458709 Q8NDZ9 215 aa6.77□□□□□ -1.33
PRAMEF35P-201ENST00000458709 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
PRAMEF35P-201ENST00000458709 FAM168BA1KXE4 195 aa6.76□□□□□ -1.33
PRAMEF35P-201ENST00000458709 PHF5AQ7RTV0 110 aaKnown RBP6.76□□□□□ -1.33
PRAMEF35P-201ENST00000458709 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
PRAMEF35P-201ENST00000458709 IGLV1-50A0A075B6I6 118 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms