RNA–Protein interactions for RNA: ENST00000457312.1

SF3B4-202, Transcript of splicing factor 3b subunit 4, humanhuman

TSL 5

Gene SF3B4, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-202ENST00000457312 C1orf195Q5TG92 126 aa7.93□□□□□ -1.14
SF3B4-202ENST00000457312 RAB5AP20339 215 aa7.92□□□□□ -1.14
SF3B4-202ENST00000457312 IFITM3Q01628 133 aa7.92□□□□□ -1.14
SF3B4-202ENST00000457312 KCNQ1DNQ9H478 68 aa7.92□□□□□ -1.14
SF3B4-202ENST00000457312 D6R8Y8 96 aa7.91□□□□□ -1.14
SF3B4-202ENST00000457312 Q9BRP9 147 aa7.91□□□□□ -1.14
SF3B4-202ENST00000457312 TRBV20-1A0A075B6N2 111 aa7.9□□□□□ -1.14
SF3B4-202ENST00000457312 B5MCH6 92 aa7.9□□□□□ -1.14
SF3B4-202ENST00000457312 ERG28Q9UKR5 140 aa7.9□□□□□ -1.14
SF3B4-202ENST00000457312 SPINK8P0C7L1 97 aa7.88□□□□□ -1.15
SF3B4-202ENST00000457312 CYSLTR1Q9Y271 337 aa7.88□□□□□ -1.15
SF3B4-202ENST00000457312 IGLV5-45A0A087WSX0 123 aa7.87□□□□□ -1.15
SF3B4-202ENST00000457312 LOC389332A0A1B0GUA5 103 aa7.87□□□□□ -1.15
SF3B4-202ENST00000457312 IGIPA6NJ69 53 aa7.87□□□□□ -1.15
SF3B4-202ENST00000457312 Q75L30 129 aa7.87□□□□□ -1.15
SF3B4-202ENST00000457312 ARPC5O15511 151 aa7.86□□□□□ -1.15
SF3B4-202ENST00000457312 C6orf99Q4VX62 202 aa7.86□□□□□ -1.15
SF3B4-202ENST00000457312 TRAV9-1A0A075B6T8 112 aa7.85□□□□□ -1.15
SF3B4-202ENST00000457312 FAM236DA0A1B0GTK5 79 aa7.84□□□□□ -1.15
SF3B4-202ENST00000457312 H7C2G1 150 aa7.84□□□□□ -1.15
SF3B4-202ENST00000457312 FAM236CP0DP71 79 aa7.84□□□□□ -1.15
SF3B4-202ENST00000457312 COX17Q14061 63 aa7.84□□□□□ -1.15
SF3B4-202ENST00000457312 Q5XG85 94 aa7.84□□□□□ -1.15
SF3B4-202ENST00000457312 Q8N9P0 234 aaPredicted RBP7.83□□□□□ -1.16
SF3B4-202ENST00000457312 NCR3O14931 201 aa7.82□□□□□ -1.16
SF3B4-202ENST00000457312 SMIM29Q86T20 159 aa7.82□□□□□ -1.16
SF3B4-202ENST00000457312 CD164Q04900 197 aa7.81□□□□□ -1.16
SF3B4-202ENST00000457312 Q6ZRX8 168 aa7.81□□□□□ -1.16
SF3B4-202ENST00000457312 TRBV10-3A0A0K0K1G6 114 aa7.8□□□□□ -1.16
SF3B4-202ENST00000457312 TINCRA0A1B0GVN0 87 aa7.8□□□□□ -1.16
SF3B4-202ENST00000457312 A6NN06 94 aa7.8□□□□□ -1.16
SF3B4-202ENST00000457312 ST20-AS1Q8NBB2 130 aa7.8□□□□□ -1.16
SF3B4-202ENST00000457312 ZNF625Q96I27 306 aaPredicted RBP7.79□□□□□ -1.16
SF3B4-202ENST00000457312 Q1RN00 199 aa7.78□□□□□ -1.16
SF3B4-202ENST00000457312 PAPPA-AS1Q5QFB9 102 aa7.78□□□□□ -1.16
SF3B4-202ENST00000457312 TEX46H3BTG2 121 aa7.77□□□□□ -1.17
SF3B4-202ENST00000457312 PPBPP02775 128 aa7.77□□□□□ -1.17
SF3B4-202ENST00000457312 TAGLN2P37802 199 aaKnown RBP7.77□□□□□ -1.17
SF3B4-202ENST00000457312 OSTCQ9NRP0 149 aa7.77□□□□□ -1.17
SF3B4-202ENST00000457312 V9GYV3 84 aa7.77□□□□□ -1.17
SF3B4-202ENST00000457312 SPRR2EP22531 72 aa7.76□□□□□ -1.17
SF3B4-202ENST00000457312 SPRR2BP35325 72 aa7.76□□□□□ -1.17
SF3B4-202ENST00000457312 SPRR2AP35326 72 aa7.76□□□□□ -1.17
SF3B4-202ENST00000457312 C10orf91Q5T1B1 145 aa7.76□□□□□ -1.17
SF3B4-202ENST00000457312 S100ZQ8WXG8 99 aa7.76□□□□□ -1.17
SF3B4-202ENST00000457312 NAT8BQ9UHF3 227 aa7.76□□□□□ -1.17
SF3B4-202ENST00000457312 ALKAL2Q6UX46 152 aa7.75□□□□□ -1.17
SF3B4-202ENST00000457312 IGLV5-39A0A0G2JS06 123 aa7.74□□□□□ -1.17
SF3B4-202ENST00000457312 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
SF3B4-202ENST00000457312 PRELID3AQ96N28 172 aa7.74□□□□□ -1.17
SF3B4-202ENST00000457312 HMSDA8MTL9 139 aa7.73□□□□□ -1.17
SF3B4-202ENST00000457312 ZNF345Q14585 488 aa7.73□□□□□ -1.17
SF3B4-202ENST00000457312 FAM74A3Q4VXF1 159 aa7.73□□□□□ -1.17
SF3B4-202ENST00000457312 OBSCN-AS1Q96MR7 158 aa7.73□□□□□ -1.17
SF3B4-202ENST00000457312 A0A1B0GW15 77 aa7.72□□□□□ -1.17
SF3B4-202ENST00000457312 SPRR1BP22528 89 aa7.71□□□□□ -1.18
SF3B4-202ENST00000457312 ORMDL2Q53FV1 153 aa7.71□□□□□ -1.18
SF3B4-202ENST00000457312 BOD1L2Q8IYS8 172 aa7.71□□□□□ -1.18
SF3B4-202ENST00000457312 A0A0G2JQZ4 141 aa7.7□□□□□ -1.18
SF3B4-202ENST00000457312 TMEM250H0YL14 139 aa7.7□□□□□ -1.18
SF3B4-202ENST00000457312 TMEM136Q6ZRR5 245 aa7.7□□□□□ -1.18
SF3B4-202ENST00000457312 LINC00299Q6ZSB3 139 aa7.7□□□□□ -1.18
SF3B4-202ENST00000457312 Q8N8P6 123 aa7.7□□□□□ -1.18
SF3B4-202ENST00000457312 MPLKIPQ8TAP9 179 aa7.7□□□□□ -1.18
SF3B4-202ENST00000457312 MRPL18Q9H0U6 180 aaKnown RBP7.7□□□□□ -1.18
SF3B4-202ENST00000457312 F8W036 122 aa7.69□□□□□ -1.18
SF3B4-202ENST00000457312 S100A12P80511 92 aa7.69□□□□□ -1.18
SF3B4-202ENST00000457312 Q6ZVH6 145 aa7.69□□□□□ -1.18
SF3B4-202ENST00000457312 H3BRM9 83 aa7.68□□□□□ -1.18
SF3B4-202ENST00000457312 LINC00158P58513 81 aa7.68□□□□□ -1.18
SF3B4-202ENST00000457312 RPL23P62829 140 aaKnown RBP7.68□□□□□ -1.18
SF3B4-202ENST00000457312 MAP1LC3AQ9H492 121 aa7.68□□□□□ -1.18
SF3B4-202ENST00000457312 SLC25A34Q6PIV7 304 aa7.67□□□□□ -1.18
SF3B4-202ENST00000457312 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
SF3B4-202ENST00000457312 A0A1B0GXF2 115 aa7.66□□□□□ -1.18
SF3B4-202ENST00000457312 SMIM27A0A1W2PRY6 76 aa7.66□□□□□ -1.18
SF3B4-202ENST00000457312 MRPL54Q6P161 138 aaKnown RBP7.66□□□□□ -1.18
SF3B4-202ENST00000457312 KANTRA0A1W2PQU2 76 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 C5orf52A6NGY3 159 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 SMLR1H3BR10 107 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 CEBPGP53567 150 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 JOSD1Q15040 202 aaPredicted RBP7.65□□□□□ -1.18
SF3B4-202ENST00000457312 PMVKQ15126 192 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 TOMM6Q96B49 74 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 PRO1933Q9H354 126 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 LAMTOR3Q9UHA4 124 aa7.65□□□□□ -1.18
SF3B4-202ENST00000457312 S100A8P05109 93 aa7.64□□□□□ -1.19
SF3B4-202ENST00000457312 PCP2Q8IVA1 136 aa7.64□□□□□ -1.19
SF3B4-202ENST00000457312 RBM12B-AS1Q9P1G2 102 aa7.64□□□□□ -1.19
SF3B4-202ENST00000457312 LOC107984156A0A0G2JMH3 177 aa7.63□□□□□ -1.19
SF3B4-202ENST00000457312 A8MWP4 228 aa7.63□□□□□ -1.19
SF3B4-202ENST00000457312 ARL17AQ8IVW1 177 aa7.63□□□□□ -1.19
SF3B4-202ENST00000457312 SMIM7Q9BQ49 75 aa7.63□□□□□ -1.19
SF3B4-202ENST00000457312 LAMTOR2Q9Y2Q5 125 aa7.63□□□□□ -1.19
SF3B4-202ENST00000457312 K7EMI3 77 aa7.62□□□□□ -1.19
SF3B4-202ENST00000457312 HRES1P13985 223 aa7.62□□□□□ -1.19
SF3B4-202ENST00000457312 ADCYAP1P18509 176 aa7.62□□□□□ -1.19
SF3B4-202ENST00000457312 DDTP30046 118 aa7.62□□□□□ -1.19
SF3B4-202ENST00000457312 ERASQ7Z444 233 aa7.62□□□□□ -1.19
SF3B4-202ENST00000457312 CST9LQ9H4G1 147 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms