RNA–Protein interactions for RNA: ENST00000457302.2

C9orf139-201, Transcript of chromosome 9 open reading frame 139, humanhuman

TSL 3

Gene C9orf139, Length 697 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139-201ENST00000457302 HERVK_113P61574 105 aa7.68□□□□□ -1.18
C9orf139-201ENST00000457302 C9orf129Q5T035 196 aaKnown RBP7.68□□□□□ -1.18
C9orf139-201ENST00000457302 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
C9orf139-201ENST00000457302 E9PLD3 99 aa7.67□□□□□ -1.18
C9orf139-201ENST00000457302 M0QXV9 152 aa7.67□□□□□ -1.18
C9orf139-201ENST00000457302 DDTP30046 118 aa7.67□□□□□ -1.18
C9orf139-201ENST00000457302 KRTAP10-4P60372 401 aaPredicted RBP7.67□□□□□ -1.18
C9orf139-201ENST00000457302 PRR3P79522 188 aaKnown RBP7.67□□□□□ -1.18
C9orf139-201ENST00000457302 BOD1L2Q8IYS8 172 aa7.67□□□□□ -1.18
C9orf139-201ENST00000457302 ZNF625Q96I27 306 aaPredicted RBP7.67□□□□□ -1.18
C9orf139-201ENST00000457302 UQCR10Q9UDW1 63 aa7.67□□□□□ -1.18
C9orf139-201ENST00000457302 ERG28Q9UKR5 140 aa7.67□□□□□ -1.18
C9orf139-201ENST00000457302 IGKV2D-26A0A0A0MRZ7 120 aa7.66□□□□□ -1.18
C9orf139-201ENST00000457302 LINC00158P58513 81 aa7.66□□□□□ -1.18
C9orf139-201ENST00000457302 C1orf137Q5JT78 98 aa7.66□□□□□ -1.18
C9orf139-201ENST00000457302 C14orf144Q96I85 54 aa7.66□□□□□ -1.18
C9orf139-201ENST00000457302 OXTP01178 125 aa7.65□□□□□ -1.18
C9orf139-201ENST00000457302 SLC25A34Q6PIV7 304 aa7.65□□□□□ -1.18
C9orf139-201ENST00000457302 NKAPP1Q8N9T2 125 aa7.65□□□□□ -1.18
C9orf139-201ENST00000457302 PLEKHB2Q96CS7 222 aa7.65□□□□□ -1.18
C9orf139-201ENST00000457302 C22orf24Q9Y442 160 aa7.65□□□□□ -1.18
C9orf139-201ENST00000457302 MYMXA0A1B0GTQ4 84 aa7.64□□□□□ -1.19
C9orf139-201ENST00000457302 HERV-K104P63124 156 aa7.64□□□□□ -1.19
C9orf139-201ENST00000457302 RPL24P83731 157 aaKnown RBP7.64□□□□□ -1.19
C9orf139-201ENST00000457302 MEIG1Q5JSS6 88 aa7.64□□□□□ -1.19
C9orf139-201ENST00000457302 SPINK6Q6UWN8 80 aa7.64□□□□□ -1.19
C9orf139-201ENST00000457302 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
C9orf139-201ENST00000457302 PLA2G2DQ9UNK4 145 aa7.64□□□□□ -1.19
C9orf139-201ENST00000457302 KRTAP29-1A8MX34 341 aaPredicted RBP7.63□□□□□ -1.19
C9orf139-201ENST00000457302 LEPROTO15243 131 aa7.63□□□□□ -1.19
C9orf139-201ENST00000457302 PCP4L1A6NKN8 68 aa7.62□□□□□ -1.19
C9orf139-201ENST00000457302 LGALS3P17931 250 aaKnown RBP7.62□□□□□ -1.19
C9orf139-201ENST00000457302 SERTAD4-AS1Q5TG53 156 aa7.62□□□□□ -1.19
C9orf139-201ENST00000457302 REG3GQ6UW15 175 aa7.62□□□□□ -1.19
C9orf139-201ENST00000457302 MRPL55Q7Z7F7 128 aaKnown RBP7.62□□□□□ -1.19
C9orf139-201ENST00000457302 PCP2Q8IVA1 136 aa7.62□□□□□ -1.19
C9orf139-201ENST00000457302 HIGD1BQ9P298 99 aa7.62□□□□□ -1.19
C9orf139-201ENST00000457302 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
C9orf139-201ENST00000457302 NDUFA12Q9UI09 145 aa7.62□□□□□ -1.19
C9orf139-201ENST00000457302 DMBT1Q9UGM3 2413 aaPredicted RBP7.61□□□□□ -1.19
C9orf139-201ENST00000457302 A0A0U1RRA0 63 aa7.61□□□□□ -1.19
C9orf139-201ENST00000457302 HNRNPA3P51991 378 aaKnown RBP7.61□□□□□ -1.19
C9orf139-201ENST00000457302 C2orf91Q6ZV80 131 aa7.61□□□□□ -1.19
C9orf139-201ENST00000457302 SND1-IT1Q9HBX3 110 aa7.61□□□□□ -1.19
C9orf139-201ENST00000457302 J3QQQ9 107 aa7.6□□□□□ -1.19
C9orf139-201ENST00000457302 NMUP48645 174 aa7.6□□□□□ -1.19
C9orf139-201ENST00000457302 KRTAP7-1Q8IUC3 87 aa7.6□□□□□ -1.19
C9orf139-201ENST00000457302 IGLV7-43P04211 117 aa7.59□□□□□ -1.19
C9orf139-201ENST00000457302 SMIM13P0DJ93 91 aa7.59□□□□□ -1.19
C9orf139-201ENST00000457302 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
C9orf139-201ENST00000457302 TSPEAR-AS2P59090 65 aa7.58□□□□□ -1.2
C9orf139-201ENST00000457302 SRSF9Q13242 221 aaKnown RBP eCLIP7.58□□□□□ -1.2
C9orf139-201ENST00000457302 IGLV5-37A0A075B6J1 123 aa7.57□□□□□ -1.2
C9orf139-201ENST00000457302 GAGE10A6NGK3 116 aa7.57□□□□□ -1.2
C9orf139-201ENST00000457302 DIRC1Q969H9 104 aa7.57□□□□□ -1.2
C9orf139-201ENST00000457302 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
C9orf139-201ENST00000457302 HERC1Q15751 4861 aa7.56□□□□□ -1.2
C9orf139-201ENST00000457302 RPL37AP8A6NKH3 93 aa7.56□□□□□ -1.2
C9orf139-201ENST00000457302 CTAG1AP78358 180 aa7.56□□□□□ -1.2
C9orf139-201ENST00000457302 MIR7-3HGQ8N6C7 128 aa7.56□□□□□ -1.2
C9orf139-201ENST00000457302 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
C9orf139-201ENST00000457302 TAL2Q16559 108 aa7.54□□□□□ -1.2
C9orf139-201ENST00000457302 KRTAP11-1Q8IUC1 163 aa7.54□□□□□ -1.2
C9orf139-201ENST00000457302 ZNF815PA8K554 130 aa7.53□□□□□ -1.2
C9orf139-201ENST00000457302 M0R378 163 aa7.53□□□□□ -1.2
C9orf139-201ENST00000457302 VPREB1P12018 145 aa7.53□□□□□ -1.2
C9orf139-201ENST00000457302 RPL28P46779 137 aaKnown RBP7.53□□□□□ -1.2
C9orf139-201ENST00000457302 SNHG12Q9BXW3 62 aa7.53□□□□□ -1.2
C9orf139-201ENST00000457302 IGKV2-28A0A075B6P5 120 aa7.52□□□□□ -1.21
C9orf139-201ENST00000457302 M0R143 59 aa7.52□□□□□ -1.21
C9orf139-201ENST00000457302 ZNF861PO60384 105 aa7.52□□□□□ -1.21
C9orf139-201ENST00000457302 BCE1O60756 84 aa7.52□□□□□ -1.21
C9orf139-201ENST00000457302 IGKV2D-28P01615 120 aa7.52□□□□□ -1.21
C9orf139-201ENST00000457302 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
C9orf139-201ENST00000457302 SPANXB1Q9NS25 103 aaPredicted RBP7.52□□□□□ -1.21
C9orf139-201ENST00000457302 IGLV1-50A0A075B6I6 118 aa7.51□□□□□ -1.21
C9orf139-201ENST00000457302 H0Y9J4 135 aa7.51□□□□□ -1.21
C9orf139-201ENST00000457302 TIMM17BO60830 172 aa7.51□□□□□ -1.21
C9orf139-201ENST00000457302 UBE2AP49459 152 aa7.51□□□□□ -1.21
C9orf139-201ENST00000457302 HSD52Q0P140 79 aa7.51□□□□□ -1.21
C9orf139-201ENST00000457302 LITAFQ99732 161 aa7.51□□□□□ -1.21
C9orf139-201ENST00000457302 PKHD1L1Q86WI1 4243 aa7.51□□□□□ -1.21
C9orf139-201ENST00000457302 LRP1Q07954 4544 aaKnown RBP7.5□□□□□ -1.21
C9orf139-201ENST00000457302 A0A0J9YXY3 114 aa7.5□□□□□ -1.21
C9orf139-201ENST00000457302 BVES-AS1Q5T3Y7 98 aa7.5□□□□□ -1.21
C9orf139-201ENST00000457302 DAND5Q8N907 189 aa7.49□□□□□ -1.21
C9orf139-201ENST00000457302 PPDPFQ9H3Y8 114 aa7.49□□□□□ -1.21
C9orf139-201ENST00000457302 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
C9orf139-201ENST00000457302 Q6ZVH6 145 aa7.48□□□□□ -1.21
C9orf139-201ENST00000457302 FAM19A1Q7Z5A9 133 aa7.48□□□□□ -1.21
C9orf139-201ENST00000457302 LOC107984156A0A0G2JMH3 177 aa7.47□□□□□ -1.21
C9orf139-201ENST00000457302 SCGB1D4Q6XE38 83 aa7.47□□□□□ -1.21
C9orf139-201ENST00000457302 ARL17AQ8IVW1 177 aa7.47□□□□□ -1.21
C9orf139-201ENST00000457302 CEND1Q8N111 149 aa7.47□□□□□ -1.21
C9orf139-201ENST00000457302 TMEM126AQ9H061 195 aa7.47□□□□□ -1.21
C9orf139-201ENST00000457302 NCR3O14931 201 aa7.46□□□□□ -1.22
C9orf139-201ENST00000457302 HINT1P49773 126 aaPredicted RBP7.46□□□□□ -1.22
C9orf139-201ENST00000457302 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
C9orf139-201ENST00000457302 ADAMTSL4-AS1Q5T5F5 129 aa7.46□□□□□ -1.22
C9orf139-201ENST00000457302 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms