RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 A0A0U1RRA0 63 aa8.77□□□□□ -1.01
SMPD4-215ENST00000457039 LINC00587B1AMM8 73 aa8.77□□□□□ -1.01
SMPD4-215ENST00000457039 ANKRD39Q53RE8 183 aa8.77□□□□□ -1.01
SMPD4-215ENST00000457039 MEIG1Q5JSS6 88 aa8.77□□□□□ -1.01
SMPD4-215ENST00000457039 TP73-AS1Q9UF72 201 aa8.77□□□□□ -1.01
SMPD4-215ENST00000457039 C22orf24Q9Y442 160 aa8.77□□□□□ -1.01
SMPD4-215ENST00000457039 IGLV5-37A0A075B6J1 123 aa8.76□□□□□ -1.01
SMPD4-215ENST00000457039 PRR3P79522 188 aaKnown RBP8.76□□□□□ -1.01
SMPD4-215ENST00000457039 KRTAP11-1Q8IUC1 163 aa8.76□□□□□ -1.01
SMPD4-215ENST00000457039 A0A0J9YXY3 114 aa8.75□□□□□ -1.01
SMPD4-215ENST00000457039 MIR7-3HGQ8N6C7 128 aa8.75□□□□□ -1.01
SMPD4-215ENST00000457039 Q8NDZ9 215 aa8.75□□□□□ -1.01
SMPD4-215ENST00000457039 TTTY13Q9BZ97 58 aa8.75□□□□□ -1.01
SMPD4-215ENST00000457039 MYCBP2O75592 4640 aa8.74□□□□□ -1.01
SMPD4-215ENST00000457039 INAFM2P0DMQ5 153 aa8.74□□□□□ -1.01
SMPD4-215ENST00000457039 VPREB1P12018 145 aa8.74□□□□□ -1.01
SMPD4-215ENST00000457039 HNRNPA3P51991 378 aaKnown RBP8.74□□□□□ -1.01
SMPD4-215ENST00000457039 MRPL55Q7Z7F7 128 aaKnown RBP8.73□□□□□ -1.01
SMPD4-215ENST00000457039 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
SMPD4-215ENST00000457039 FAT3Q8TDW7 4589 aa8.72□□□□□ -1.01
SMPD4-215ENST00000457039 LOC107984156A0A0G2JMH3 177 aa8.72□□□□□ -1.01
SMPD4-215ENST00000457039 ZNF815PA8K554 130 aa8.72□□□□□ -1.01
SMPD4-215ENST00000457039 LBHQ53QV2 105 aaPredicted RBP8.72□□□□□ -1.01
SMPD4-215ENST00000457039 ARL17AQ8IVW1 177 aa8.72□□□□□ -1.01
SMPD4-215ENST00000457039 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
SMPD4-215ENST00000457039 DAND5Q8N907 189 aa8.71□□□□□ -1.02
SMPD4-215ENST00000457039 LINC00167Q96N53 147 aa8.71□□□□□ -1.02
SMPD4-215ENST00000457039 LITAFQ99732 161 aa8.71□□□□□ -1.02
SMPD4-215ENST00000457039 TMA7Q9Y2S6 64 aaKnown RBP8.71□□□□□ -1.02
SMPD4-215ENST00000457039 SCGB1D1O95968 90 aa8.7□□□□□ -1.02
SMPD4-215ENST00000457039 UBE2BP63146 152 aa8.7□□□□□ -1.02
SMPD4-215ENST00000457039 RPL24P83731 157 aaKnown RBP8.7□□□□□ -1.02
SMPD4-215ENST00000457039 NKAPP1Q8N9T2 125 aa8.7□□□□□ -1.02
SMPD4-215ENST00000457039 LRP1Q07954 4544 aaKnown RBP8.7□□□□□ -1.02
SMPD4-215ENST00000457039 TIMM17BO60830 172 aa8.69□□□□□ -1.02
SMPD4-215ENST00000457039 PCP2Q8IVA1 136 aa8.69□□□□□ -1.02
SMPD4-215ENST00000457039 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
SMPD4-215ENST00000457039 BOD1L2Q8IYS8 172 aa8.68□□□□□ -1.02
SMPD4-215ENST00000457039 GAGE10A6NGK3 116 aa8.67□□□□□ -1.02
SMPD4-215ENST00000457039 HSBP1L1C9JCN9 74 aa8.67□□□□□ -1.02
SMPD4-215ENST00000457039 SRSF9Q13242 221 aaKnown RBP eCLIP8.67□□□□□ -1.02
SMPD4-215ENST00000457039 JOSD1Q15040 202 aaPredicted RBP8.67□□□□□ -1.02
SMPD4-215ENST00000457039 SOSTDC1Q6X4U4 206 aa8.67□□□□□ -1.02
SMPD4-215ENST00000457039 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
SMPD4-215ENST00000457039 RPL37AP8A6NKH3 93 aa8.66□□□□□ -1.02
SMPD4-215ENST00000457039 EIF4EBP3O60516 100 aaPredicted RBP8.66□□□□□ -1.02
SMPD4-215ENST00000457039 IGLV1-50A0A075B6I6 118 aa8.65□□□□□ -1.02
SMPD4-215ENST00000457039 IGLV7-43P04211 117 aa8.65□□□□□ -1.02
SMPD4-215ENST00000457039 M0R378 163 aa8.64□□□□□ -1.03
SMPD4-215ENST00000457039 SPINK6Q6UWN8 80 aa8.64□□□□□ -1.03
SMPD4-215ENST00000457039 SCGB1D4Q6XE38 83 aa8.64□□□□□ -1.03
SMPD4-215ENST00000457039 IGKV2-28A0A075B6P5 120 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 NCR3O14931 201 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 NDUFC2O95298 119 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 IGKV2D-28P01615 120 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 NPC2P61916 151 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 LINC00308Q8TCZ7 52 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 MIEN1Q9BRT3 115 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 SPANXDQ9BXN6 97 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 SPANXCQ9NY87 97 aa8.63□□□□□ -1.03
SMPD4-215ENST00000457039 TMEM238C9JI98 176 aa8.62□□□□□ -1.03
SMPD4-215ENST00000457039 TRBV10-2A0A0K0K1G8 114 aa8.61□□□□□ -1.03
SMPD4-215ENST00000457039 BCE1O60756 84 aa8.61□□□□□ -1.03
SMPD4-215ENST00000457039 PYY3Q5JQD4 70 aa8.61□□□□□ -1.03
SMPD4-215ENST00000457039 TMEM126AQ9H061 195 aa8.6□□□□□ -1.03
SMPD4-215ENST00000457039 SPANXB1Q9NS25 103 aaPredicted RBP8.6□□□□□ -1.03
SMPD4-215ENST00000457039 COX8AP10176 69 aa8.59□□□□□ -1.03
SMPD4-215ENST00000457039 Q6ZVH6 145 aa8.59□□□□□ -1.03
SMPD4-215ENST00000457039 PPDPFQ9H3Y8 114 aa8.59□□□□□ -1.03
SMPD4-215ENST00000457039 PAM16Q9Y3D7 125 aa8.59□□□□□ -1.03
SMPD4-215ENST00000457039 KRTAP29-1A8MX34 341 aaPredicted RBP8.58□□□□□ -1.04
SMPD4-215ENST00000457039 ZNF861PO60384 105 aa8.58□□□□□ -1.04
SMPD4-215ENST00000457039 REG3GQ6UW15 175 aa8.58□□□□□ -1.04
SMPD4-215ENST00000457039 KRTAP13-1Q8IUC0 172 aa8.58□□□□□ -1.04
SMPD4-215ENST00000457039 VAMP8Q9BV40 100 aa8.58□□□□□ -1.04
SMPD4-215ENST00000457039 KCNQ1DNQ9H478 68 aa8.58□□□□□ -1.04
SMPD4-215ENST00000457039 TRBV10-3A0A0K0K1G6 114 aa8.57□□□□□ -1.04
SMPD4-215ENST00000457039 DLEU1O43261 78 aa8.57□□□□□ -1.04
SMPD4-215ENST00000457039 OXTP01178 125 aa8.57□□□□□ -1.04
SMPD4-215ENST00000457039 IFITM1P13164 125 aa8.57□□□□□ -1.04
SMPD4-215ENST00000457039 SPATA45Q537H7 98 aa8.57□□□□□ -1.04
SMPD4-215ENST00000457039 H0Y9J4 135 aa8.56□□□□□ -1.04
SMPD4-215ENST00000457039 PRYO14603 147 aa8.56□□□□□ -1.04
SMPD4-215ENST00000457039 IGLV6-57P01721 117 aa8.56□□□□□ -1.04
SMPD4-215ENST00000457039 SPRR1AP35321 89 aa8.56□□□□□ -1.04
SMPD4-215ENST00000457039 DIRC1Q969H9 104 aa8.56□□□□□ -1.04
SMPD4-215ENST00000457039 TNXBP22105 4242 aa8.56□□□□□ -1.04
SMPD4-215ENST00000457039 DDTP30046 118 aa8.55□□□□□ -1.04
SMPD4-215ENST00000457039 MUSTN1Q8IVN3 82 aa8.55□□□□□ -1.04
SMPD4-215ENST00000457039 COPS9Q8WXC6 57 aa8.55□□□□□ -1.04
SMPD4-215ENST00000457039 RPL28P46779 137 aaKnown RBP8.54□□□□□ -1.04
SMPD4-215ENST00000457039 C14orf144Q96I85 54 aa8.54□□□□□ -1.04
SMPD4-215ENST00000457039 KRTAP4-16G5E9R7 235 aaPredicted RBP8.53□□□□□ -1.04
SMPD4-215ENST00000457039 FAM19A1Q7Z5A9 133 aa8.53□□□□□ -1.04
SMPD4-215ENST00000457039 HERC1Q15751 4861 aa8.53□□□□□ -1.04
SMPD4-215ENST00000457039 UBE2AP49459 152 aa8.52□□□□□ -1.05
SMPD4-215ENST00000457039 PRLHP81277 87 aa8.52□□□□□ -1.05
SMPD4-215ENST00000457039 S100A7L2Q5SY68 101 aa8.52□□□□□ -1.05
SMPD4-215ENST00000457039 LINC00518Q8N0U6 118 aa8.52□□□□□ -1.05
SMPD4-215ENST00000457039 LINC00337Q8N6G1 96 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms