RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GAGE2BQ13066 116 aa5.54□□□□□ -1.52
COL28A1-205ENST00000453441 MAJINQ3KP22 176 aa5.54□□□□□ -1.52
COL28A1-205ENST00000453441 CIRBP-AS1Q8TBR5 109 aa5.54□□□□□ -1.52
COL28A1-205ENST00000453441 ZNF625Q96I27 306 aaPredicted RBP5.54□□□□□ -1.52
COL28A1-205ENST00000453441 PLAC8Q9NZF1 115 aa5.54□□□□□ -1.52
COL28A1-205ENST00000453441 A0A087WYN8 130 aa5.53□□□□□ -1.52
COL28A1-205ENST00000453441 E9PLD3 99 aa5.53□□□□□ -1.52
COL28A1-205ENST00000453441 J3QQQ9 107 aa5.53□□□□□ -1.52
COL28A1-205ENST00000453441 LGALS3P17931 250 aaKnown RBP5.53□□□□□ -1.52
COL28A1-205ENST00000453441 Q6ZRP5 223 aa5.53□□□□□ -1.52
COL28A1-205ENST00000453441 PMCHL2Q9BQD1 86 aa5.53□□□□□ -1.52
COL28A1-205ENST00000453441 EPM2AB3EWF7 344 aa5.52□□□□□ -1.53
COL28A1-205ENST00000453441 CHTF8P0CG12 524 aa5.52□□□□□ -1.53
COL28A1-205ENST00000453441 STPG4Q8N801 248 aa5.52□□□□□ -1.53
COL28A1-205ENST00000453441 NDUFA12Q9UI09 145 aa5.52□□□□□ -1.53
COL28A1-205ENST00000453441 ERG28Q9UKR5 140 aa5.52□□□□□ -1.53
COL28A1-205ENST00000453441 PANO1I0J062 215 aa5.51□□□□□ -1.53
COL28A1-205ENST00000453441 GAGE2EQ4V326 116 aa5.51□□□□□ -1.53
COL28A1-205ENST00000453441 C9orf116Q5BN46 136 aaPredicted RBP5.51□□□□□ -1.53
COL28A1-205ENST00000453441 C7orf33Q8WU49 177 aa5.51□□□□□ -1.53
COL28A1-205ENST00000453441 GAGE2DQ9UEU5 116 aa5.51□□□□□ -1.53
COL28A1-205ENST00000453441 HSBP1L1C9JCN9 74 aa5.5□□□□□ -1.53
COL28A1-205ENST00000453441 MEIG1Q5JSS6 88 aa5.5□□□□□ -1.53
COL28A1-205ENST00000453441 PFN2P35080 140 aa5.49□□□□□ -1.53
COL28A1-205ENST00000453441 KRTAP15-1Q3LI76 137 aa5.49□□□□□ -1.53
COL28A1-205ENST00000453441 FAT1Q14517 4588 aa5.48□□□□□ -1.53
COL28A1-205ENST00000453441 LINC00158P58513 81 aa5.48□□□□□ -1.53
COL28A1-205ENST00000453441 TSPEAR-AS2P59090 65 aa5.48□□□□□ -1.53
COL28A1-205ENST00000453441 RPL24P83731 157 aaKnown RBP5.48□□□□□ -1.53
COL28A1-205ENST00000453441 LBHQ53QV2 105 aaPredicted RBP5.48□□□□□ -1.53
COL28A1-205ENST00000453441 C9orf129Q5T035 196 aaKnown RBP5.48□□□□□ -1.53
COL28A1-205ENST00000453441 TP73-AS1Q9UF72 201 aa5.48□□□□□ -1.53
COL28A1-205ENST00000453441 TIMM17BO60830 172 aa5.47□□□□□ -1.53
COL28A1-205ENST00000453441 SCGB1D1O95968 90 aa5.47□□□□□ -1.53
COL28A1-205ENST00000453441 HAMPP81172 84 aa5.47□□□□□ -1.53
COL28A1-205ENST00000453441 Q5VSD8 79 aa5.47□□□□□ -1.53
COL28A1-205ENST00000453441 SND1-IT1Q9HBX3 110 aa5.47□□□□□ -1.53
COL28A1-205ENST00000453441 XAGE1AQ9HD64 81 aa5.47□□□□□ -1.53
COL28A1-205ENST00000453441 IGLV5-37A0A075B6J1 123 aa5.46□□□□□ -1.54
COL28A1-205ENST00000453441 A0A1W2PNN7 141 aa5.46□□□□□ -1.54
COL28A1-205ENST00000453441 ZNF815PA8K554 130 aa5.46□□□□□ -1.54
COL28A1-205ENST00000453441 M0QXV9 152 aa5.46□□□□□ -1.54
COL28A1-205ENST00000453441 SMR3BP02814 79 aaPredicted RBP5.46□□□□□ -1.54
COL28A1-205ENST00000453441 SMIM13P0DJ93 91 aa5.46□□□□□ -1.54
COL28A1-205ENST00000453441 A0A0J9YXY3 114 aa5.45□□□□□ -1.54
COL28A1-205ENST00000453441 RPL37AP61513 92 aaKnown RBP5.45□□□□□ -1.54
COL28A1-205ENST00000453441 JOSD1Q15040 202 aaPredicted RBP5.45□□□□□ -1.54
COL28A1-205ENST00000453441 FAM19A5Q7Z5A7 132 aaPredicted RBP5.45□□□□□ -1.54
COL28A1-205ENST00000453441 ATOH7Q8N100 152 aa5.45□□□□□ -1.54
COL28A1-205ENST00000453441 MIR7-3HGQ8N6C7 128 aa5.45□□□□□ -1.54
COL28A1-205ENST00000453441 NKAPP1Q8N9T2 125 aa5.45□□□□□ -1.54
COL28A1-205ENST00000453441 COPS9Q8WXC6 57 aa5.45□□□□□ -1.54
COL28A1-205ENST00000453441 MIEN1Q9BRT3 115 aa5.45□□□□□ -1.54
COL28A1-205ENST00000453441 VPS13BQ7Z7G8 4022 aa5.45□□□□□ -1.54
COL28A1-205ENST00000453441 IGKV2D-26A0A0A0MRZ7 120 aa5.44□□□□□ -1.54
COL28A1-205ENST00000453441 LOC107984156A0A0G2JMH3 177 aa5.44□□□□□ -1.54
COL28A1-205ENST00000453441 FAM168BA1KXE4 195 aa5.44□□□□□ -1.54
COL28A1-205ENST00000453441 TMEM238C9JI98 176 aa5.44□□□□□ -1.54
COL28A1-205ENST00000453441 Q6ZVH6 145 aa5.44□□□□□ -1.54
COL28A1-205ENST00000453441 MRPL55Q7Z7F7 128 aaKnown RBP5.44□□□□□ -1.54
COL28A1-205ENST00000453441 ARL17AQ8IVW1 177 aa5.44□□□□□ -1.54
COL28A1-205ENST00000453441 C22orf24Q9Y442 160 aa5.44□□□□□ -1.54
COL28A1-205ENST00000453441 UBE2BP63146 152 aa5.43□□□□□ -1.54
COL28A1-205ENST00000453441 SERTAD4-AS1Q5TG53 156 aa5.43□□□□□ -1.54
COL28A1-205ENST00000453441 SCGB1D4Q6XE38 83 aa5.43□□□□□ -1.54
COL28A1-205ENST00000453441 PHF5AQ7RTV0 110 aaKnown RBP5.43□□□□□ -1.54
COL28A1-205ENST00000453441 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
COL28A1-205ENST00000453441 PPDPFQ9H3Y8 114 aa5.43□□□□□ -1.54
COL28A1-205ENST00000453441 A0A0U1RRA0 63 aa5.42□□□□□ -1.54
COL28A1-205ENST00000453441 NDUFC2O95298 119 aa5.42□□□□□ -1.54
COL28A1-205ENST00000453441 VPREB1P12018 145 aa5.42□□□□□ -1.54
COL28A1-205ENST00000453441 PRR3P79522 188 aaKnown RBP5.42□□□□□ -1.54
COL28A1-205ENST00000453441 KRTAP7-1Q8IUC3 87 aa5.42□□□□□ -1.54
COL28A1-205ENST00000453441 BOD1L2Q8IYS8 172 aa5.42□□□□□ -1.54
COL28A1-205ENST00000453441 VAMP8Q9BV40 100 aa5.41□□□□□ -1.54
COL28A1-205ENST00000453441 TRBV10-2A0A0K0K1G8 114 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 M0R378 163 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 DLEU1O43261 78 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 IFITM1P13164 125 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 S100A12P80511 92 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 PCP2Q8IVA1 136 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 LITAFQ99732 161 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 SPANXDQ9BXN6 97 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 SPANXB1Q9NS25 103 aaPredicted RBP5.4□□□□□ -1.54
COL28A1-205ENST00000453441 SPANXCQ9NY87 97 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 PSORS1C2Q9UIG4 136 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 CBY1Q9Y3M2 126 aa5.4□□□□□ -1.54
COL28A1-205ENST00000453441 ABCA13Q86UQ4 5058 aa5.4□□□□□ -1.55
COL28A1-205ENST00000453441 COX8AP10176 69 aa5.39□□□□□ -1.55
COL28A1-205ENST00000453441 KRTAP10-4P60372 401 aaPredicted RBP5.39□□□□□ -1.55
COL28A1-205ENST00000453441 DAND5Q8N907 189 aa5.39□□□□□ -1.55
COL28A1-205ENST00000453441 LINC00308Q8TCZ7 52 aa5.39□□□□□ -1.55
COL28A1-205ENST00000453441 LINC00167Q96N53 147 aa5.39□□□□□ -1.55
COL28A1-205ENST00000453441 TTTY13Q9BZ97 58 aa5.39□□□□□ -1.55
COL28A1-205ENST00000453441 SRRM2Q9UQ35 2752 aaKnown RBP5.38□□□□□ -1.55
COL28A1-205ENST00000453441 INAFM2P0DMQ5 153 aa5.38□□□□□ -1.55
COL28A1-205ENST00000453441 SPATA45Q537H7 98 aa5.38□□□□□ -1.55
COL28A1-205ENST00000453441 C1orf137Q5JT78 98 aa5.38□□□□□ -1.55
COL28A1-205ENST00000453441 ADAMTSL4-AS1Q5T5F5 129 aa5.38□□□□□ -1.55
COL28A1-205ENST00000453441 LINC00518Q8N0U6 118 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms