RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 PSORS1C2Q9UIG4 136 aa9.01□□□□□ -0.97
USP39-206ENST00000448971 KRTAP7-1Q8IUC3 87 aa9□□□□□ -0.97
USP39-206ENST00000448971 ZNF625Q96I27 306 aaPredicted RBP9□□□□□ -0.97
USP39-206ENST00000448971 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
USP39-206ENST00000448971 PLNP26678 52 aa8.98□□□□□ -0.97
USP39-206ENST00000448971 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
USP39-206ENST00000448971 SPINK6Q6UWN8 80 aa8.97□□□□□ -0.97
USP39-206ENST00000448971 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
USP39-206ENST00000448971 C22orf24Q9Y442 160 aa8.97□□□□□ -0.97
USP39-206ENST00000448971 DPM2O94777 84 aa8.96□□□□□ -0.98
USP39-206ENST00000448971 ATP6V1G1O75348 118 aa8.95□□□□□ -0.98
USP39-206ENST00000448971 HERVK_113P61574 105 aa8.95□□□□□ -0.98
USP39-206ENST00000448971 COX17Q14061 63 aa8.95□□□□□ -0.98
USP39-206ENST00000448971 LBHQ53QV2 105 aaPredicted RBP8.95□□□□□ -0.98
USP39-206ENST00000448971 MRPL55Q7Z7F7 128 aaKnown RBP8.95□□□□□ -0.98
USP39-206ENST00000448971 KRTAP11-1Q8IUC1 163 aa8.95□□□□□ -0.98
USP39-206ENST00000448971 NKAPP1Q8N9T2 125 aa8.95□□□□□ -0.98
USP39-206ENST00000448971 IGKCP01834 107 aa8.94□□□□□ -0.98
USP39-206ENST00000448971 S100A1P23297 94 aa8.94□□□□□ -0.98
USP39-206ENST00000448971 MEIG1Q5JSS6 88 aa8.94□□□□□ -0.98
USP39-206ENST00000448971 TP73-AS1Q9UF72 201 aa8.94□□□□□ -0.98
USP39-206ENST00000448971 A0A0U1RRA0 63 aa8.93□□□□□ -0.98
USP39-206ENST00000448971 IGLV7-43P04211 117 aa8.93□□□□□ -0.98
USP39-206ENST00000448971 LINC00158P58513 81 aa8.93□□□□□ -0.98
USP39-206ENST00000448971 REG3GQ6UW15 175 aa8.93□□□□□ -0.98
USP39-206ENST00000448971 SND1-IT1Q9HBX3 110 aa8.93□□□□□ -0.98
USP39-206ENST00000448971 NDUFA12Q9UI09 145 aa8.92□□□□□ -0.98
USP39-206ENST00000448971 GAGE10A6NGK3 116 aa8.91□□□□□ -0.98
USP39-206ENST00000448971 HERV-K104P63124 156 aa8.91□□□□□ -0.98
USP39-206ENST00000448971 SRSF9Q13242 221 aaKnown RBP eCLIP8.91□□□□□ -0.98
USP39-206ENST00000448971 PLEKHB2Q96CS7 222 aa8.91□□□□□ -0.98
USP39-206ENST00000448971 MYMXA0A1B0GTQ4 84 aa8.9□□□□□ -0.98
USP39-206ENST00000448971 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
USP39-206ENST00000448971 LEPROTO15243 131 aa8.9□□□□□ -0.98
USP39-206ENST00000448971 TSPEAR-AS2P59090 65 aa8.9□□□□□ -0.98
USP39-206ENST00000448971 IGLV5-37A0A075B6J1 123 aa8.89□□□□□ -0.99
USP39-206ENST00000448971 RPL37AP8A6NKH3 93 aa8.89□□□□□ -0.99
USP39-206ENST00000448971 SMIM13P0DJ93 91 aa8.89□□□□□ -0.99
USP39-206ENST00000448971 LGALS3P17931 250 aaKnown RBP8.89□□□□□ -0.99
USP39-206ENST00000448971 RPL24P83731 157 aaKnown RBP8.89□□□□□ -0.99
USP39-206ENST00000448971 DIRC1Q969H9 104 aa8.89□□□□□ -0.99
USP39-206ENST00000448971 LINC00167Q96N53 147 aa8.89□□□□□ -0.99
USP39-206ENST00000448971 J3QQQ9 107 aa8.88□□□□□ -0.99
USP39-206ENST00000448971 COA6Q5JTJ3 125 aaKnown RBP8.88□□□□□ -0.99
USP39-206ENST00000448971 LINC01600Q96MT4 127 aa8.88□□□□□ -0.99
USP39-206ENST00000448971 LINC00587B1AMM8 73 aa8.87□□□□□ -0.99
USP39-206ENST00000448971 VPREB1P12018 145 aa8.87□□□□□ -0.99
USP39-206ENST00000448971 PET117Q6UWS5 81 aa8.87□□□□□ -0.99
USP39-206ENST00000448971 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
USP39-206ENST00000448971 H0Y9J4 135 aa8.86□□□□□ -0.99
USP39-206ENST00000448971 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
USP39-206ENST00000448971 NMUP48645 174 aa8.86□□□□□ -0.99
USP39-206ENST00000448971 KRTDAPP60985 99 aa8.86□□□□□ -0.99
USP39-206ENST00000448971 MIR7-3HGQ8N6C7 128 aa8.86□□□□□ -0.99
USP39-206ENST00000448971 C3orf79P0CE67 100 aa8.85□□□□□ -0.99
USP39-206ENST00000448971 LINC01545Q5VT33 79 aa8.85□□□□□ -0.99
USP39-206ENST00000448971 KRTAP4-8Q9BYQ9 185 aa8.85□□□□□ -0.99
USP39-206ENST00000448971 BCE1O60756 84 aa8.84□□□□□ -0.99
USP39-206ENST00000448971 KRTAP10-8P60410 259 aa8.84□□□□□ -0.99
USP39-206ENST00000448971 C20orf202A1L168 122 aa8.83□□□□□ -1
USP39-206ENST00000448971 E9PLD3 99 aa8.83□□□□□ -1
USP39-206ENST00000448971 BOD1L2Q8IYS8 172 aa8.83□□□□□ -1
USP39-206ENST00000448971 Q8NDZ9 215 aa8.83□□□□□ -1
USP39-206ENST00000448971 ZNF861PO60384 105 aa8.82□□□□□ -1
USP39-206ENST00000448971 RPL28P46779 137 aaKnown RBP8.82□□□□□ -1
USP39-206ENST00000448971 DAND5Q8N907 189 aa8.82□□□□□ -1
USP39-206ENST00000448971 NCR3O14931 201 aa8.81□□□□□ -1
USP39-206ENST00000448971 UBE2AP49459 152 aa8.81□□□□□ -1
USP39-206ENST00000448971 MIEN1Q9BRT3 115 aa8.81□□□□□ -1
USP39-206ENST00000448971 IGLV1-50A0A075B6I6 118 aa8.8□□□□□ -1
USP39-206ENST00000448971 S100A2P29034 98 aa8.79□□□□□ -1
USP39-206ENST00000448971 TMEM126AQ9H061 195 aa8.79□□□□□ -1
USP39-206ENST00000448971 TMEM238C9JI98 176 aa8.78□□□□□ -1
USP39-206ENST00000448971 M0R378 163 aa8.78□□□□□ -1
USP39-206ENST00000448971 S100A6P06703 90 aa8.78□□□□□ -1
USP39-206ENST00000448971 FAM19A1Q7Z5A9 133 aa8.78□□□□□ -1
USP39-206ENST00000448971 LPAP08519 4548 aa8.77□□□□□ -1.01
USP39-206ENST00000448971 A0A0J9YXY3 114 aa8.77□□□□□ -1.01
USP39-206ENST00000448971 PRLHP81277 87 aa8.77□□□□□ -1.01
USP39-206ENST00000448971 IGKV2D-26A0A0A0MRZ7 120 aa8.76□□□□□ -1.01
USP39-206ENST00000448971 ZNF815PA8K554 130 aa8.76□□□□□ -1.01
USP39-206ENST00000448971 NPC2P61916 151 aa8.76□□□□□ -1.01
USP39-206ENST00000448971 HIST3H2BBQ8N257 126 aa8.76□□□□□ -1.01
USP39-206ENST00000448971 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
USP39-206ENST00000448971 KRTAP1-4P0C5Y4 121 aa8.75□□□□□ -1.01
USP39-206ENST00000448971 ATOH7Q8N100 152 aa8.75□□□□□ -1.01
USP39-206ENST00000448971 AKR1D1P51857 326 aa8.74□□□□□ -1.01
USP39-206ENST00000448971 PRYO14603 147 aa8.73□□□□□ -1.01
USP39-206ENST00000448971 S100A12P80511 92 aa8.73□□□□□ -1.01
USP39-206ENST00000448971 KRTAP13-1Q8IUC0 172 aa8.73□□□□□ -1.01
USP39-206ENST00000448971 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
USP39-206ENST00000448971 TTTY13Q9BZ97 58 aa8.73□□□□□ -1.01
USP39-206ENST00000448971 SPANXB1Q9NS25 103 aaPredicted RBP8.73□□□□□ -1.01
USP39-206ENST00000448971 LOC107984156A0A0G2JMH3 177 aa8.72□□□□□ -1.01
USP39-206ENST00000448971 TRBV10-3A0A0K0K1G6 114 aa8.72□□□□□ -1.01
USP39-206ENST00000448971 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.72□□□□□ -1.01
USP39-206ENST00000448971 ARL17AQ8IVW1 177 aa8.72□□□□□ -1.01
USP39-206ENST00000448971 RPL13AP40429 203 aaKnown RBP8.71□□□□□ -1.02
USP39-206ENST00000448971 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
USP39-206ENST00000448971 SCGB1D4Q6XE38 83 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms