RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 ACYP2P14621 99 aa2.23□□□□□ -2.05
R3HDM1-209ENST00000441871 TECTAO75443 2155 aa2.23□□□□□ -2.05
R3HDM1-209ENST00000441871 SHANK1Q9Y566 2161 aa2.23□□□□□ -2.05
R3HDM1-209ENST00000441871 IGLV4-60A0A075B6I1 120 aa2.22□□□□□ -2.05
R3HDM1-209ENST00000441871 IGLV6-57P01721 117 aa2.22□□□□□ -2.05
R3HDM1-209ENST00000441871 PRB2P02812 416 aaPredicted RBP2.22□□□□□ -2.05
R3HDM1-209ENST00000441871 RPL38P63173 70 aaKnown RBP2.22□□□□□ -2.05
R3HDM1-209ENST00000441871 TFF3Q07654 80 aa2.22□□□□□ -2.05
R3HDM1-209ENST00000441871 C14orf177Q52M58 125 aa2.22□□□□□ -2.05
R3HDM1-209ENST00000441871 KRTAP2-2Q9BYT5 123 aa2.22□□□□□ -2.05
R3HDM1-209ENST00000441871 FXYD4P59646 89 aa2.21□□□□□ -2.06
R3HDM1-209ENST00000441871 KRTAP7-1Q8IUC3 87 aa2.21□□□□□ -2.06
R3HDM1-209ENST00000441871 FN1P02751 2386 aaKnown RBP2.21□□□□□ -2.06
R3HDM1-209ENST00000441871 IAPPP10997 89 aa2.2□□□□□ -2.06
R3HDM1-209ENST00000441871 RPS27LQ71UM5 84 aaKnown RBP2.2□□□□□ -2.06
R3HDM1-209ENST00000441871 SORL1Q92673 2214 aa2.19□□□□□ -2.06
R3HDM1-209ENST00000441871 SSC5DA1L4H1 1573 aa2.19□□□□□ -2.06
R3HDM1-209ENST00000441871 GPR179Q6PRD1 2367 aa2.19□□□□□ -2.06
R3HDM1-209ENST00000441871 KRTAP10-6P60371 365 aaPredicted RBP2.19□□□□□ -2.06
R3HDM1-209ENST00000441871 KRTAP10-7P60409 375 aaPredicted RBP2.19□□□□□ -2.06
R3HDM1-209ENST00000441871 KNTC1P50748 2209 aa2.18□□□□□ -2.06
R3HDM1-209ENST00000441871 CPSF4LA6NMK7 179 aaKnown RBP2.18□□□□□ -2.06
R3HDM1-209ENST00000441871 H3BRN7 92 aa2.18□□□□□ -2.06
R3HDM1-209ENST00000441871 INE1O15225 51 aa2.17□□□□□ -2.06
R3HDM1-209ENST00000441871 MRPL33O75394 65 aaKnown RBP2.17□□□□□ -2.06
R3HDM1-209ENST00000441871 PRB1P04280 392 aa2.17□□□□□ -2.06
R3HDM1-209ENST00000441871 Q6ZQY7 126 aa2.17□□□□□ -2.06
R3HDM1-209ENST00000441871 ARHGAP5-AS1Q96IT6 56 aa2.17□□□□□ -2.06
R3HDM1-209ENST00000441871 SMIM2Q9BVW6 85 aa2.17□□□□□ -2.06
R3HDM1-209ENST00000441871 COL4A4P53420 1690 aaPredicted RBP2.17□□□□□ -2.06
R3HDM1-209ENST00000441871 GAS8-AS1O95177 125 aa2.16□□□□□ -2.06
R3HDM1-209ENST00000441871 LINC00315P59091 139 aa2.16□□□□□ -2.06
R3HDM1-209ENST00000441871 MAPK1IP1LQ8NDC0 245 aa2.16□□□□□ -2.06
R3HDM1-209ENST00000441871 LINC00308Q8TCZ7 52 aa2.16□□□□□ -2.06
R3HDM1-209ENST00000441871 CCL19Q99731 98 aa2.16□□□□□ -2.06
R3HDM1-209ENST00000441871 DEFB131BA0A096LNP1 70 aa2.15□□□□□ -2.07
R3HDM1-209ENST00000441871 CNFNQ9BYD5 112 aa2.15□□□□□ -2.07
R3HDM1-209ENST00000441871 TTTY10Q9BZA0 68 aa2.15□□□□□ -2.07
R3HDM1-209ENST00000441871 ALMS1Q8TCU4 4167 aa2.15□□□□□ -2.07
R3HDM1-209ENST00000441871 M0R2N4 97 aa2.14□□□□□ -2.07
R3HDM1-209ENST00000441871 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.14□□□□□ -2.07
R3HDM1-209ENST00000441871 SSBP3-AS1Q7Z2R9 100 aa2.14□□□□□ -2.07
R3HDM1-209ENST00000441871 KRTAP11-1Q8IUC1 163 aa2.14□□□□□ -2.07
R3HDM1-209ENST00000441871 PTPRQQ9UMZ3 2332 aa2.13□□□□□ -2.07
R3HDM1-209ENST00000441871 G3V318 75 aa2.13□□□□□ -2.07
R3HDM1-209ENST00000441871 LY6G6CO95867 125 aa2.13□□□□□ -2.07
R3HDM1-209ENST00000441871 CRIP1P50238 77 aa2.13□□□□□ -2.07
R3HDM1-209ENST00000441871 LINC00158P58513 81 aa2.13□□□□□ -2.07
R3HDM1-209ENST00000441871 ANAPC11Q9NYG5 84 aa2.13□□□□□ -2.07
R3HDM1-209ENST00000441871 PDE4DIPQ5VU43 2346 aa2.12□□□□□ -2.07
R3HDM1-209ENST00000441871 ASXL3Q9C0F0 2248 aa2.12□□□□□ -2.07
R3HDM1-209ENST00000441871 NDUFA1O15239 70 aa2.12□□□□□ -2.07
R3HDM1-209ENST00000441871 CNOT1A5YKK6 2376 aaKnown RBP2.12□□□□□ -2.07
R3HDM1-209ENST00000441871 ANKRD17O75179 2603 aaKnown RBP2.11□□□□□ -2.07
R3HDM1-209ENST00000441871 AHCTF1Q8WYP5 2266 aa2.11□□□□□ -2.07
R3HDM1-209ENST00000441871 DOPEY2Q9Y3R5 2298 aa2.11□□□□□ -2.07
R3HDM1-209ENST00000441871 SPTY2D1-AS1A0A0U1RR47 76 aa2.11□□□□□ -2.07
R3HDM1-209ENST00000441871 Q6ZRX8 168 aa2.11□□□□□ -2.07
R3HDM1-209ENST00000441871 Q8N9L7 120 aa2.11□□□□□ -2.07
R3HDM1-209ENST00000441871 SMIM11BQ8TCY0 68 aa2.11□□□□□ -2.07
R3HDM1-209ENST00000441871 IGKV2D-24A0A075B6R9 120 aa2.1□□□□□ -2.07
R3HDM1-209ENST00000441871 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
R3HDM1-209ENST00000441871 LINC01590Q5TEZ4 76 aa2.1□□□□□ -2.07
R3HDM1-209ENST00000441871 IGKV2-28A0A075B6P5 120 aa2.09□□□□□ -2.07
R3HDM1-209ENST00000441871 IGKV2D-28P01615 120 aa2.09□□□□□ -2.07
R3HDM1-209ENST00000441871 ANGP03950 147 aaKnown RBP2.09□□□□□ -2.07
R3HDM1-209ENST00000441871 Q8IZM0 81 aa2.09□□□□□ -2.07
R3HDM1-209ENST00000441871 PLAC4Q8WY50 150 aa2.09□□□□□ -2.07
R3HDM1-209ENST00000441871 CDKN2A-AS1Q9UH64 79 aa2.09□□□□□ -2.07
R3HDM1-209ENST00000441871 GVQW2A0A096LPI5 108 aaPredicted RBP2.08□□□□□ -2.08
R3HDM1-209ENST00000441871 PRB3Q04118 309 aaPredicted RBP2.08□□□□□ -2.08
R3HDM1-209ENST00000441871 LOC730098B7Z3J9 87 aa2.07□□□□□ -2.08
R3HDM1-209ENST00000441871 A0A096LNT2 108 aa2.06□□□□□ -2.08
R3HDM1-209ENST00000441871 C10orf99Q6UWK7 81 aa2.06□□□□□ -2.08
R3HDM1-209ENST00000441871 PRO3102Q9H379 93 aa2.06□□□□□ -2.08
R3HDM1-209ENST00000441871 ASCC3Q8N3C0 2202 aaKnown RBP2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 COL6A6A6NMZ7 2263 aa2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 ICE1Q9Y2F5 2266 aa2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 H3BSH0 61 aa2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 DSCR10P59022 87 aa2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 KRTAP10-8P60410 259 aa2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 Q6ZRN7 208 aaPredicted RBP2.05□□□□□ -2.08
R3HDM1-209ENST00000441871 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
R3HDM1-209ENST00000441871 PP632Q6XCG6 107 aa2.03□□□□□ -2.08
R3HDM1-209ENST00000441871 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.03□□□□□ -2.084e-6■■■□□ 15.1
R3HDM1-209ENST00000441871 KNL1Q8NG31 2342 aa2.03□□□□□ -2.08
R3HDM1-209ENST00000441871 TRIOBPQ9H2D6 2365 aa2.02□□□□□ -2.09
R3HDM1-209ENST00000441871 CACNA1EQ15878 2313 aa2.02□□□□□ -2.09
R3HDM1-209ENST00000441871 IGKV2-24A0A0C4DH68 120 aa2.02□□□□□ -2.09
R3HDM1-209ENST00000441871 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
R3HDM1-209ENST00000441871 LYNX1G3V0Z9 82 aa2.01□□□□□ -2.09
R3HDM1-209ENST00000441871 KRTAP12-2P59991 146 aa2.01□□□□□ -2.09
R3HDM1-209ENST00000441871 PRR9Q5T870 116 aa2.01□□□□□ -2.09
R3HDM1-209ENST00000441871 IGFL1Q6UW32 110 aa2.01□□□□□ -2.09
R3HDM1-209ENST00000441871 LINC00575Q6W349 94 aa2.01□□□□□ -2.09
R3HDM1-209ENST00000441871 CRIPTQ9P021 101 aa2.01□□□□□ -2.09
R3HDM1-209ENST00000441871 POLR2KP53803 58 aaKnown RBP2□□□□□ -2.09
R3HDM1-209ENST00000441871 RPL39P62891 51 aaKnown RBP1.99□□□□□ -2.09
R3HDM1-209ENST00000441871 MINOS1Q5TGZ0 78 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms