RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 E9PLD3 99 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 K7EP13 123 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 WFDC2Q14508 124 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 MIAQ16674 131 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 SPATA45Q537H7 98 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 C10orf126Q8N4M7 172 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 VAMP8Q9BV40 100 aa3.08□□□□□ -1.92
PTPN4-206ENST00000441089 IGKV2D-24A0A075B6R9 120 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 LEPROTO15243 131 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 MT3P25713 68 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 NMUP48645 174 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 KIAA0087Q14695 138 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 Q6ZRU5 148 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 SCXQ7RTU7 201 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 LINC01561Q8N1V8 128 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 C15orf56Q8N910 161 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 C14orf144Q96I85 54 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 PRO1933Q9H354 126 aa3.07□□□□□ -1.92
PTPN4-206ENST00000441089 HSBP1L1C9JCN9 74 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 H3BRM9 83 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 J3QQQ9 107 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 COX7A2LO14548 114 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 PSCAO43653 123 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 COX8AP10176 69 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 RPL37AP61513 92 aaKnown RBP3.06□□□□□ -1.92
PTPN4-206ENST00000441089 HERVK_113P61574 105 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 S100A12P80511 92 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 HIGD2BQ4VC39 106 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 BOD1L2Q8IYS8 172 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 COX7B2Q8TF08 81 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 PLEKHB2Q96CS7 222 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 LINC00526Q96FQ7 95 aa3.06□□□□□ -1.92
PTPN4-206ENST00000441089 MYMXA0A1B0GTQ4 84 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 LRCOL1A6NCL2 159 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 USP17L23D6RBM5 183 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 SPAG11BQ08648 103 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 C2orf82Q6UX34 121 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 C2orf91Q6ZV80 131 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 Q8IZM0 81 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 Q8N814 137 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 ORAOV1Q8WV07 137 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 ZNF625Q96I27 306 aaPredicted RBP3.05□□□□□ -1.92
PTPN4-206ENST00000441089 TOMM7Q9P0U1 55 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 NDUFA12Q9UI09 145 aa3.05□□□□□ -1.92
PTPN4-206ENST00000441089 GVQW2A0A096LPI5 108 aaPredicted RBP3.04□□□□□ -1.92
PTPN4-206ENST00000441089 ZNF815PA8K554 130 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 LECT2O14960 151 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 NDUFA1O15239 70 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 DLEU1O43261 78 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 LGALS3P17931 250 aaKnown RBP3.04□□□□□ -1.92
PTPN4-206ENST00000441089 SLC25A34Q6PIV7 304 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 UNQ6190/PRO20217Q6UXQ8 127 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 RMI2Q96E14 147 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 LITAFQ99732 161 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 UQCR10Q9UDW1 63 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 LPAP08519 4548 aa3.04□□□□□ -1.92
PTPN4-206ENST00000441089 A0A0J9YXY3 114 aa3.03□□□□□ -1.92
PTPN4-206ENST00000441089 APOMO95445 188 aa3.03□□□□□ -1.92
PTPN4-206ENST00000441089 HNRNPA3P51991 378 aaKnown RBP3.03□□□□□ -1.92
PTPN4-206ENST00000441089 ADAMTSL4-AS1Q5T5F5 129 aa3.03□□□□□ -1.92
PTPN4-206ENST00000441089 MIEN1Q9BRT3 115 aa3.03□□□□□ -1.92
PTPN4-206ENST00000441089 C6orf48Q9UBA6 75 aa3.03□□□□□ -1.92
PTPN4-206ENST00000441089 TSTD3H0UI37 97 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 PRSS2P07478 247 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 DDTP30046 118 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 CXCL5P42830 114 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 C9orf116Q5BN46 136 aaPredicted RBP3.02□□□□□ -1.93
PTPN4-206ENST00000441089 C6orf226Q5I0X4 101 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 CFAP161Q6P656 301 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 PRR26Q8N8Z3 221 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 CIRBP-AS1Q8TBR5 109 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 C2orf48Q96LS8 159 aa3.02□□□□□ -1.93
PTPN4-206ENST00000441089 OBSCNQ5VST9 7968 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.01□□□□□ -1.93
PTPN4-206ENST00000441089 A0A0U1RRA0 63 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 PCP4L1A6NKN8 68 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 LINC00587B1AMM8 73 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 TIMM17BO60830 172 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 SMIM13P0DJ93 91 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 CKS1BP61024 79 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 HERV-K104P63124 156 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 CTAG1AP78358 180 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 SYCNQ0VAF6 134 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 SOSTDC1Q6X4U4 206 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 DAND5Q8N907 189 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 SPANXB1Q9NS25 103 aaPredicted RBP3.01□□□□□ -1.93
PTPN4-206ENST00000441089 HIGD1BQ9P298 99 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 ERG28Q9UKR5 140 aa3.01□□□□□ -1.93
PTPN4-206ENST00000441089 F8WDY8 70 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 PANO1I0J062 215 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 PFN2P35080 140 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 CNBPP62633 177 aaKnown RBP3□□□□□ -1.93
PTPN4-206ENST00000441089 MEIG1Q5JSS6 88 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 SCGB1D4Q6XE38 83 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 MIR7-3HGQ8N6C7 128 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 Q8NDZ9 215 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 CARD19Q96LW7 228 aa3□□□□□ -1.93
PTPN4-206ENST00000441089 LINC01600Q96MT4 127 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms