RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 LYSTQ99698 3801 aa3.22□□□□□ -1.89
CCDC140-202ENST00000440903 IGKV2D-26A0A0A0MRZ7 120 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 A0A0J9YXY3 114 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 A0A0U1RRA0 63 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 DLEU1O43261 78 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 SMIM13P0DJ93 91 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 COX8AP10176 69 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 PTTG1IPP53801 180 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 SRSF9Q13242 221 aaKnown RBP eCLIP3.21□□□□□ -1.9
CCDC140-202ENST00000440903 C10orf25Q5T742 122 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 MIR7-3HGQ8N6C7 128 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 UQCR10Q9UDW1 63 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 CBY1Q9Y3M2 126 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 RYR3Q15413 4870 aa3.21□□□□□ -1.9
CCDC140-202ENST00000440903 A0A096LNI7 61 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 IFITM1P13164 125 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 HNRNPA3P51991 378 aaKnown RBP3.2□□□□□ -1.9
CCDC140-202ENST00000440903 LINC01620Q4KN68 170 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 LBHQ53QV2 105 aaPredicted RBP3.2□□□□□ -1.9
CCDC140-202ENST00000440903 C9orf116Q5BN46 136 aaPredicted RBP3.2□□□□□ -1.9
CCDC140-202ENST00000440903 Q6ZRP5 223 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 PCP2Q8IVA1 136 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 BOD1L2Q8IYS8 172 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 C7orf33Q8WU49 177 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 SND1-IT1Q9HBX3 110 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 XAGE1AQ9HD64 81 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 DNAH17Q9UFH2 4485 aa3.2□□□□□ -1.9
CCDC140-202ENST00000440903 DNAH10Q8IVF4 4471 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 DNAH2Q9P225 4427 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 LOC105371267A0A1B0GV96 52 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 M0QXV9 152 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 FUSP35637 526 aaKnown RBP eCLIP3.19□□□□□ -1.9
CCDC140-202ENST00000440903 UBE2BP63146 152 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 SDIM1Q6ZPB5 146 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 FAM19A5Q7Z5A7 132 aaPredicted RBP3.19□□□□□ -1.9
CCDC140-202ENST00000440903 SPACA4Q8TDM5 124 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 C14orf144Q96I85 54 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 HIST1H4GQ99525 98 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 C12orf57Q99622 126 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 SPANXDQ9BXN6 97 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 TTTY13Q9BZ97 58 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 SPANXB1Q9NS25 103 aaPredicted RBP3.19□□□□□ -1.9
CCDC140-202ENST00000440903 SPANXCQ9NY87 97 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
CCDC140-202ENST00000440903 CHTF8P0CG12 524 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 NPC2P61916 151 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 TAL2Q16559 108 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 S100A7L2Q5SY68 101 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 LINC00518Q8N0U6 118 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 DAND5Q8N907 189 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 SVIPQ8NHG7 77 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 HIGD1BQ9P298 99 aa3.18□□□□□ -1.9
CCDC140-202ENST00000440903 KMT2AQ03164 3969 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 A0A087WYN8 130 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 KRTAP29-1A8MX34 341 aaPredicted RBP3.17□□□□□ -1.9
CCDC140-202ENST00000440903 M0R143 59 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 CDK2AP2O75956 126 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 NDUFC2O95298 119 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 HSD52Q0P140 79 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 C9orf129Q5T035 196 aaKnown RBP3.17□□□□□ -1.9
CCDC140-202ENST00000440903 Q6ZSA8 131 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 SCXQ7RTU7 201 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 LINC00308Q8TCZ7 52 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 PPDPFQ9H3Y8 114 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 PLAC8Q9NZF1 115 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 TP73-AS1Q9UF72 201 aa3.17□□□□□ -1.9
CCDC140-202ENST00000440903 TRAV13-2A0A0B4J235 113 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 TRBV10-2A0A0K0K1G8 114 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 M0R378 163 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 NCR3O14931 201 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 MRPL55Q7Z7F7 128 aaKnown RBP3.16□□□□□ -1.9
CCDC140-202ENST00000440903 OR13C6PQ8NH95 151 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 CIRBP-AS1Q8TBR5 109 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 RAB37Q96AX2 223 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 LITAFQ99732 161 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 PRO1933Q9H354 126 aa3.16□□□□□ -1.9
CCDC140-202ENST00000440903 FAT2Q9NYQ8 4349 aa3.15□□□□□ -1.9
CCDC140-202ENST00000440903 DNAH11Q96DT5 4516 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 IGLV5-37A0A075B6J1 123 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 LOC107984156A0A0G2JMH3 177 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 A6NDN8 102 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 VPREB1P12018 145 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 DDTP30046 118 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 HINT1P49773 126 aaPredicted RBP3.15□□□□□ -1.91
CCDC140-202ENST00000440903 ADAMTSL4-AS1Q5T5F5 129 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 SERTAD4-AS1Q5TG53 156 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 MUSTN1Q8IVN3 82 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 ARL17AQ8IVW1 177 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 TMEM126AQ9H061 195 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 C22orf24Q9Y442 160 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 FRAS1Q86XX4 4008 aa3.15□□□□□ -1.91
CCDC140-202ENST00000440903 A0A1W2PNN7 141 aa3.14□□□□□ -1.91
CCDC140-202ENST00000440903 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
CCDC140-202ENST00000440903 A4D1N5 150 aa3.14□□□□□ -1.91
CCDC140-202ENST00000440903 GAGE10A6NGK3 116 aa3.14□□□□□ -1.91
CCDC140-202ENST00000440903 PRYO14603 147 aa3.14□□□□□ -1.91
CCDC140-202ENST00000440903 RPL37AP61513 92 aaKnown RBP3.14□□□□□ -1.91
CCDC140-202ENST00000440903 Q1RN00 199 aa3.14□□□□□ -1.91
CCDC140-202ENST00000440903 C2orf91Q6ZV80 131 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms