RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 A0A0J9YXY3 114 aa11.16□□□□□ -0.62
CCDC188-201ENST00000439765 DLEU1O43261 78 aa11.16□□□□□ -0.62
CCDC188-201ENST00000439765 KRTAP29-1A8MX34 341 aaPredicted RBP11.15□□□□□ -0.62
CCDC188-201ENST00000439765 ERG28Q9UKR5 140 aa11.15□□□□□ -0.62
CCDC188-201ENST00000439765 LINC00587B1AMM8 73 aa11.14□□□□□ -0.63
CCDC188-201ENST00000439765 J3QL48 77 aa11.14□□□□□ -0.63
CCDC188-201ENST00000439765 RPL37AP61513 92 aaKnown RBP11.14□□□□□ -0.63
CCDC188-201ENST00000439765 COX17Q14061 63 aa11.14□□□□□ -0.63
CCDC188-201ENST00000439765 MEIG1Q5JSS6 88 aa11.14□□□□□ -0.63
CCDC188-201ENST00000439765 SLC25A34Q6PIV7 304 aa11.14□□□□□ -0.63
CCDC188-201ENST00000439765 TLX1NBP0CAT3 122 aa11.12□□□□□ -0.63
CCDC188-201ENST00000439765 SMIM13P0DJ93 91 aa11.12□□□□□ -0.63
CCDC188-201ENST00000439765 PFN2P35080 140 aa11.12□□□□□ -0.63
CCDC188-201ENST00000439765 SCGB1D4Q6XE38 83 aa11.12□□□□□ -0.63
CCDC188-201ENST00000439765 TP73-AS1Q9UF72 201 aa11.12□□□□□ -0.63
CCDC188-201ENST00000439765 NDUFC2-KCTD14E9PQ53 114 aa11.12□□□□□ -0.63
CCDC188-201ENST00000439765 LINC00158P58513 81 aa11.12□□□□□ -0.63
CCDC188-201ENST00000439765 A0A0U1RRA0 63 aa11.11□□□□□ -0.63
CCDC188-201ENST00000439765 Q6ZRP5 223 aa11.11□□□□□ -0.63
CCDC188-201ENST00000439765 LRP1Q07954 4544 aaKnown RBP11.1□□□□□ -0.63
CCDC188-201ENST00000439765 TIMM17BO60830 172 aa11.1□□□□□ -0.63
CCDC188-201ENST00000439765 GAGE2EQ4V326 116 aa11.1□□□□□ -0.63
CCDC188-201ENST00000439765 PRO1933Q9H354 126 aa11.1□□□□□ -0.63
CCDC188-201ENST00000439765 GAGE2DQ9UEU5 116 aa11.1□□□□□ -0.63
CCDC188-201ENST00000439765 C7orf33Q8WU49 177 aa11.09□□□□□ -0.63
CCDC188-201ENST00000439765 LITAFQ99732 161 aa11.09□□□□□ -0.63
CCDC188-201ENST00000439765 UQCR10Q9UDW1 63 aa11.09□□□□□ -0.63
CCDC188-201ENST00000439765 ADAMTSL4-AS1Q5T5F5 129 aa11.08□□□□□ -0.64
CCDC188-201ENST00000439765 A0A1W2PNN7 141 aa11.07□□□□□ -0.64
CCDC188-201ENST00000439765 MIR7-3HGQ8N6C7 128 aa11.07□□□□□ -0.64
CCDC188-201ENST00000439765 TMEM238C9JI98 176 aa11.06□□□□□ -0.64
CCDC188-201ENST00000439765 HIGD1BQ9P298 99 aa11.06□□□□□ -0.64
CCDC188-201ENST00000439765 FAM168BA1KXE4 195 aa11.06□□□□□ -0.64
CCDC188-201ENST00000439765 C2orf91Q6ZV80 131 aa11.06□□□□□ -0.64
CCDC188-201ENST00000439765 DAND5Q8N907 189 aa11.06□□□□□ -0.64
CCDC188-201ENST00000439765 MIEN1Q9BRT3 115 aa11.06□□□□□ -0.64
CCDC188-201ENST00000439765 SPANXDQ9BXN6 97 aa11.05□□□□□ -0.64
CCDC188-201ENST00000439765 SPANXCQ9NY87 97 aa11.05□□□□□ -0.64
CCDC188-201ENST00000439765 FAT3Q8TDW7 4589 aa11.05□□□□□ -0.64
CCDC188-201ENST00000439765 OXTP01178 125 aa11.04□□□□□ -0.64
CCDC188-201ENST00000439765 HNRNPA3P51991 378 aaKnown RBP11.04□□□□□ -0.64
CCDC188-201ENST00000439765 FAM19A5Q7Z5A7 132 aaPredicted RBP11.04□□□□□ -0.64
CCDC188-201ENST00000439765 SND1-IT1Q9HBX3 110 aa11.04□□□□□ -0.64
CCDC188-201ENST00000439765 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
CCDC188-201ENST00000439765 PKHD1L1Q86WI1 4243 aa11.04□□□□□ -0.64
CCDC188-201ENST00000439765 TSTD3H0UI37 97 aa11.03□□□□□ -0.64
CCDC188-201ENST00000439765 Q6ZVH6 145 aa11.03□□□□□ -0.64
CCDC188-201ENST00000439765 XAGE1AQ9HD64 81 aa11.03□□□□□ -0.64
CCDC188-201ENST00000439765 PRR3P79522 188 aaKnown RBP11.01□□□□□ -0.65
CCDC188-201ENST00000439765 SRSF9Q13242 221 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC188-201ENST00000439765 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
CCDC188-201ENST00000439765 LOC107984156A0A0G2JMH3 177 aa11□□□□□ -0.65
CCDC188-201ENST00000439765 PHF5AQ7RTV0 110 aaKnown RBP11□□□□□ -0.65
CCDC188-201ENST00000439765 ARL17AQ8IVW1 177 aa11□□□□□ -0.65
CCDC188-201ENST00000439765 NPC2P61916 151 aa11□□□□□ -0.65
CCDC188-201ENST00000439765 SOSTDC1Q6X4U4 206 aa11□□□□□ -0.65
CCDC188-201ENST00000439765 LINC00308Q8TCZ7 52 aa11□□□□□ -0.65
CCDC188-201ENST00000439765 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
CCDC188-201ENST00000439765 IFITM1P13164 125 aa10.99□□□□□ -0.65
CCDC188-201ENST00000439765 HIST1H4GQ99525 98 aa10.99□□□□□ -0.65
CCDC188-201ENST00000439765 KRTAP7-1Q8IUC3 87 aa10.98□□□□□ -0.65
CCDC188-201ENST00000439765 MUSTN1Q8IVN3 82 aa10.98□□□□□ -0.65
CCDC188-201ENST00000439765 M0QXV9 152 aa10.97□□□□□ -0.65
CCDC188-201ENST00000439765 COPS9Q8WXC6 57 aa10.97□□□□□ -0.65
CCDC188-201ENST00000439765 TAL2Q16559 108 aa10.96□□□□□ -0.65
CCDC188-201ENST00000439765 PPDPFQ9H3Y8 114 aa10.96□□□□□ -0.65
CCDC188-201ENST00000439765 PLA2G2DQ9UNK4 145 aa10.96□□□□□ -0.65
CCDC188-201ENST00000439765 SERTAD4-AS1Q5TG53 156 aa10.95□□□□□ -0.66
CCDC188-201ENST00000439765 HSD52Q0P140 79 aa10.93□□□□□ -0.66
CCDC188-201ENST00000439765 PSORS1C2Q9UIG4 136 aa10.93□□□□□ -0.66
CCDC188-201ENST00000439765 RPL24P83731 157 aaKnown RBP10.93□□□□□ -0.66
CCDC188-201ENST00000439765 CEND1Q8N111 149 aa10.93□□□□□ -0.66
CCDC188-201ENST00000439765 Q8NDZ9 215 aa10.93□□□□□ -0.66
CCDC188-201ENST00000439765 NDUFC2O95298 119 aa10.92□□□□□ -0.66
CCDC188-201ENST00000439765 VPREB1P12018 145 aa10.92□□□□□ -0.66
CCDC188-201ENST00000439765 KRTAP11-1Q8IUC1 163 aa10.92□□□□□ -0.66
CCDC188-201ENST00000439765 HMCN2Q8NDA2 5059 aa10.91□□□□□ -0.66
CCDC188-201ENST00000439765 DDTP30046 118 aa10.91□□□□□ -0.66
CCDC188-201ENST00000439765 UBE2BP63146 152 aa10.91□□□□□ -0.66
CCDC188-201ENST00000439765 CTAG1AP78358 180 aa10.91□□□□□ -0.66
CCDC188-201ENST00000439765 IGLV5-37A0A075B6J1 123 aa10.89□□□□□ -0.67
CCDC188-201ENST00000439765 C1orf137Q5JT78 98 aa10.89□□□□□ -0.67
CCDC188-201ENST00000439765 A4D1N5 150 aa10.88□□□□□ -0.67
CCDC188-201ENST00000439765 C22orf24Q9Y442 160 aa10.88□□□□□ -0.67
CCDC188-201ENST00000439765 NKAPP1Q8N9T2 125 aa10.87□□□□□ -0.67
CCDC188-201ENST00000439765 FXYD2P54710 66 aa10.87□□□□□ -0.67
CCDC188-201ENST00000439765 IGKV2-28A0A075B6P5 120 aa10.86□□□□□ -0.67
CCDC188-201ENST00000439765 TRBV10-2A0A0K0K1G8 114 aa10.86□□□□□ -0.67
CCDC188-201ENST00000439765 M0R378 163 aa10.86□□□□□ -0.67
CCDC188-201ENST00000439765 IGKV2D-28P01615 120 aa10.86□□□□□ -0.67
CCDC188-201ENST00000439765 MT1HL1P0DM35 61 aa10.86□□□□□ -0.67
CCDC188-201ENST00000439765 PCP4L1A6NKN8 68 aa10.85□□□□□ -0.67
CCDC188-201ENST00000439765 NCR3O14931 201 aa10.85□□□□□ -0.67
CCDC188-201ENST00000439765 MRPL55Q7Z7F7 128 aaKnown RBP10.85□□□□□ -0.67
CCDC188-201ENST00000439765 TMEM238LA0A1B0GVL6 79 aa10.84□□□□□ -0.67
CCDC188-201ENST00000439765 A6NJY4 79 aa10.84□□□□□ -0.67
CCDC188-201ENST00000439765 BVES-AS1Q5T3Y7 98 aa10.84□□□□□ -0.67
CCDC188-201ENST00000439765 HINT1P49773 126 aaPredicted RBP10.83□□□□□ -0.68
CCDC188-201ENST00000439765 LBHQ53QV2 105 aaPredicted RBP10.83□□□□□ -0.68
CCDC188-201ENST00000439765 SPINK6Q6UWN8 80 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms