RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 HUWE1Q7Z6Z7 4374 aaKnown RBP5.96□□□□□ -1.46
HPS4-206ENST00000439453 TRGV4A0A0C4DH28 118 aa5.96□□□□□ -1.46
HPS4-206ENST00000439453 FAM236DA0A1B0GTK5 79 aa5.96□□□□□ -1.46
HPS4-206ENST00000439453 FAM236CP0DP71 79 aa5.96□□□□□ -1.46
HPS4-206ENST00000439453 IGHV3OR16-9A0A0B4J2B5 98 aa5.95□□□□□ -1.46
HPS4-206ENST00000439453 FAM19A1Q7Z5A9 133 aa5.95□□□□□ -1.46
HPS4-206ENST00000439453 LINC00167Q96N53 147 aa5.95□□□□□ -1.46
HPS4-206ENST00000439453 JMJD7-PLA2G4BH0Y9G9 81 aa5.95□□□□□ -1.46
HPS4-206ENST00000439453 DEFB114Q30KQ6 69 aa5.95□□□□□ -1.46
HPS4-206ENST00000439453 ENHOQ6UWT2 76 aa5.95□□□□□ -1.46
HPS4-206ENST00000439453 IGLV4-60A0A075B6I1 120 aa5.94□□□□□ -1.46
HPS4-206ENST00000439453 LOC100131303A0A0U1RQF7 123 aa5.94□□□□□ -1.46
HPS4-206ENST00000439453 STHQ8IWL8 128 aa5.94□□□□□ -1.46
HPS4-206ENST00000439453 A0A087WZ39 114 aa5.94□□□□□ -1.46
HPS4-206ENST00000439453 CCL24O00175 119 aa5.94□□□□□ -1.46
HPS4-206ENST00000439453 LYPD5Q6UWN5 251 aa5.94□□□□□ -1.46
HPS4-206ENST00000439453 DNAH7Q8WXX0 4024 aa5.94□□□□□ -1.46
HPS4-206ENST00000439453 NOP10Q9NPE3 64 aaKnown RBP5.93□□□□□ -1.46
HPS4-206ENST00000439453 ODF3L2Q3SX64 289 aa5.93□□□□□ -1.46
HPS4-206ENST00000439453 Q8N814 137 aa5.93□□□□□ -1.46
HPS4-206ENST00000439453 TMEM256-PLSCR3K7ERE1 68 aa5.93□□□□□ -1.46
HPS4-206ENST00000439453 KRTAP10-11P60412 298 aa5.93□□□□□ -1.46
HPS4-206ENST00000439453 OXLD1Q5BKU9 147 aa5.93□□□□□ -1.46
HPS4-206ENST00000439453 TRBV10-3A0A0K0K1G6 114 aa5.92□□□□□ -1.46
HPS4-206ENST00000439453 XCL1P47992 114 aa5.92□□□□□ -1.46
HPS4-206ENST00000439453 NANOS2P60321 138 aaKnown RBP5.92□□□□□ -1.46
HPS4-206ENST00000439453 EGFEM1PQ0D2K5 195 aa5.92□□□□□ -1.46
HPS4-206ENST00000439453 TRBV6-8A0A0A6YYG3 113 aa5.91□□□□□ -1.46
HPS4-206ENST00000439453 PRR3P79522 188 aaKnown RBP5.91□□□□□ -1.46
HPS4-206ENST00000439453 MPLKIPQ8TAP9 179 aa5.9□□□□□ -1.46
HPS4-206ENST00000439453 SNURFQ9Y675 71 aa5.9□□□□□ -1.46
HPS4-206ENST00000439453 LINC00959A0A1B0GUT2 108 aa5.9□□□□□ -1.47
HPS4-206ENST00000439453 TRAV7A0A075B6U4 112 aa5.89□□□□□ -1.47
HPS4-206ENST00000439453 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
HPS4-206ENST00000439453 PLAC8L1A1L4L8 177 aa5.89□□□□□ -1.47
HPS4-206ENST00000439453 EPM2AB3EWF7 344 aa5.89□□□□□ -1.47
HPS4-206ENST00000439453 H7BZZ5 65 aa5.89□□□□□ -1.47
HPS4-206ENST00000439453 DAD1P61803 113 aa5.89□□□□□ -1.47
HPS4-206ENST00000439453 CLPSL2Q6UWE3 100 aa5.89□□□□□ -1.47
HPS4-206ENST00000439453 BCE1O60756 84 aa5.88□□□□□ -1.47
HPS4-206ENST00000439453 PRB2P02812 416 aaPredicted RBP5.88□□□□□ -1.47
HPS4-206ENST00000439453 Q8IZM0 81 aa5.88□□□□□ -1.47
HPS4-206ENST00000439453 V9GYY9 64 aa5.88□□□□□ -1.47
HPS4-206ENST00000439453 C16orf74Q96GX8 76 aa5.87□□□□□ -1.47
HPS4-206ENST00000439453 TGP01266 2768 aa5.87□□□□□ -1.47
HPS4-206ENST00000439453 Q6ZQT0 140 aa5.87□□□□□ -1.47
HPS4-206ENST00000439453 GIG44P09565 113 aaPredicted RBP5.86□□□□□ -1.47
HPS4-206ENST00000439453 CSMD3Q7Z407 3707 aa5.86□□□□□ -1.47
HPS4-206ENST00000439453 K7EIL1 84 aa5.86□□□□□ -1.47
HPS4-206ENST00000439453 DEFB130BP0DP73 79 aa5.86□□□□□ -1.47
HPS4-206ENST00000439453 DEFB130AP0DP74 79 aa5.86□□□□□ -1.47
HPS4-206ENST00000439453 C6orf99Q4VX62 202 aa5.86□□□□□ -1.47
HPS4-206ENST00000439453 IGLV1-51P01701 117 aa5.86□□□□□ -1.47
HPS4-206ENST00000439453 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
HPS4-206ENST00000439453 LOC110117498A0A087WWA1 95 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 RPL35AP18077 110 aaKnown RBP5.85□□□□□ -1.47
HPS4-206ENST00000439453 SCXQ7RTU7 201 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 TRAV10A0A0B4J240 114 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 KLKP1Q107X0 134 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 C9orf66Q5T8R8 295 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 LINC00575Q6W349 94 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 ZNF561-AS1K7EIQ3 104 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 M0R2N4 97 aa5.85□□□□□ -1.47
HPS4-206ENST00000439453 SMIM26A0A096LP01 95 aa5.84□□□□□ -1.47
HPS4-206ENST00000439453 C1orf195Q5TG92 126 aa5.84□□□□□ -1.47
HPS4-206ENST00000439453 Q6ZVQ6 151 aa5.84□□□□□ -1.47
HPS4-206ENST00000439453 F8WEM9 126 aa5.84□□□□□ -1.47
HPS4-206ENST00000439453 C6orf223Q8N319 242 aa5.84□□□□□ -1.47
HPS4-206ENST00000439453 RMI2Q96E14 147 aa5.84□□□□□ -1.47
HPS4-206ENST00000439453 COX17Q14061 63 aa5.83□□□□□ -1.48
HPS4-206ENST00000439453 LINC00336Q6ZUF6 198 aa5.83□□□□□ -1.48
HPS4-206ENST00000439453 PRO0628Q9UI54 55 aa5.83□□□□□ -1.48
HPS4-206ENST00000439453 A0A096LPF7 62 aa5.83□□□□□ -1.48
HPS4-206ENST00000439453 Q8NDZ9 215 aa5.83□□□□□ -1.48
HPS4-206ENST00000439453 HTN3P15516 51 aa5.82□□□□□ -1.48
HPS4-206ENST00000439453 KIAA0087Q14695 138 aa5.82□□□□□ -1.48
HPS4-206ENST00000439453 STARD9Q9P2P6 4700 aa5.82□□□□□ -1.48
HPS4-206ENST00000439453 LYSTQ99698 3801 aa5.82□□□□□ -1.48
HPS4-206ENST00000439453 C9orf116Q5BN46 136 aaPredicted RBP5.82□□□□□ -1.48
HPS4-206ENST00000439453 WFDC10AQ9H1F0 79 aa5.82□□□□□ -1.48
HPS4-206ENST00000439453 DYNC2H1Q8NCM8 4307 aaKnown RBP5.82□□□□□ -1.48
HPS4-206ENST00000439453 A0A1B0GUV1 79 aa5.82□□□□□ -1.48
HPS4-206ENST00000439453 TENM3Q9P273 2699 aa5.82□□□□□ -1.48
HPS4-206ENST00000439453 IGLV10-54A0A075B6I4 117 aa5.81□□□□□ -1.48
HPS4-206ENST00000439453 CXCL6P80162 114 aa5.81□□□□□ -1.48
HPS4-206ENST00000439453 FP248Q71RG6 208 aaPredicted RBP5.81□□□□□ -1.48
HPS4-206ENST00000439453 CSNK1G2-AS1Q8NCQ2 148 aa5.81□□□□□ -1.48
HPS4-206ENST00000439453 C19orf73Q9NVV2 129 aa5.81□□□□□ -1.48
HPS4-206ENST00000439453 GYPEP15421 78 aa5.8□□□□□ -1.48
HPS4-206ENST00000439453 IGHV4-28A0A0C4DH34 117 aa5.8□□□□□ -1.48
HPS4-206ENST00000439453 PDE6GP18545 87 aa5.8□□□□□ -1.48
HPS4-206ENST00000439453 CMC4P56277 68 aaPredicted RBP5.8□□□□□ -1.48
HPS4-206ENST00000439453 LINC00269Q8N2A0 174 aa5.8□□□□□ -1.48
HPS4-206ENST00000439453 Q8N3U1 123 aa5.8□□□□□ -1.48
HPS4-206ENST00000439453 CD164L2Q6UWJ8 174 aa5.79□□□□□ -1.48
HPS4-206ENST00000439453 ANGP03950 147 aaKnown RBP5.79□□□□□ -1.48
HPS4-206ENST00000439453 Q6ZQY7 126 aa5.79□□□□□ -1.48
HPS4-206ENST00000439453 TM2D3Q9BRN9 247 aa5.79□□□□□ -1.48
HPS4-206ENST00000439453 NDUFC1O43677 76 aa5.79□□□□□ -1.48
HPS4-206ENST00000439453 NREPQ16612 68 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms