RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 DOPEY1Q5JWR5 2465 aa10.62□□□□□ -0.71
NEDD4-202ENST00000435532 C2CD3Q4AC94 2353 aa10.61□□□□□ -0.71
NEDD4-202ENST00000435532 LINC01547P58512 204 aaPredicted RBP10.61□□□□□ -0.71
NEDD4-202ENST00000435532 USP9XQ93008 2570 aaPredicted RBP10.61□□□□□ -0.71
NEDD4-202ENST00000435532 A8MTW9 85 aa10.61□□□□□ -0.71
NEDD4-202ENST00000435532 BCE1O60756 84 aa10.6□□□□□ -0.71
NEDD4-202ENST00000435532 MTORP42345 2549 aa10.6□□□□□ -0.71
NEDD4-202ENST00000435532 TLN2Q9Y4G6 2542 aa10.6□□□□□ -0.71
NEDD4-202ENST00000435532 KRTAP1-1Q07627 177 aa10.6□□□□□ -0.71
NEDD4-202ENST00000435532 KIAA0087Q14695 138 aa10.6□□□□□ -0.71
NEDD4-202ENST00000435532 FN1P02751 2386 aaKnown RBP10.59□□□□□ -0.71
NEDD4-202ENST00000435532 Q8N3U1 123 aa10.58□□□□□ -0.72
NEDD4-202ENST00000435532 LINC00208Q96KT6 92 aa10.57□□□□□ -0.72
NEDD4-202ENST00000435532 EPM2AB3EWF7 344 aa10.57□□□□□ -0.72
NEDD4-202ENST00000435532 SNURFQ9Y675 71 aa10.57□□□□□ -0.72
NEDD4-202ENST00000435532 USP9YO00507 2555 aaPredicted RBP10.57□□□□□ -0.72
NEDD4-202ENST00000435532 POLQO75417 2590 aa10.56□□□□□ -0.72
NEDD4-202ENST00000435532 ELOF1P60002 83 aaKnown RBP10.56□□□□□ -0.72
NEDD4-202ENST00000435532 Q6ZRX8 168 aa10.55□□□□□ -0.72
NEDD4-202ENST00000435532 HCG22E2RYF7 251 aa10.55□□□□□ -0.72
NEDD4-202ENST00000435532 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
NEDD4-202ENST00000435532 TRAV7A0A075B6U4 112 aa10.54□□□□□ -0.72
NEDD4-202ENST00000435532 ANKRD17O75179 2603 aaKnown RBP10.54□□□□□ -0.72
NEDD4-202ENST00000435532 A0A1B0GW54 56 aa10.54□□□□□ -0.72
NEDD4-202ENST00000435532 DEFB116Q30KQ4 102 aa10.53□□□□□ -0.72
NEDD4-202ENST00000435532 H0Y9P7 68 aa10.51□□□□□ -0.73
NEDD4-202ENST00000435532 MPLKIPQ8TAP9 179 aa10.51□□□□□ -0.73
NEDD4-202ENST00000435532 Q9UF83 564 aa10.51□□□□□ -0.73
NEDD4-202ENST00000435532 PRR4Q16378 134 aa10.5□□□□□ -0.73
NEDD4-202ENST00000435532 A0A087WTM6 91 aa10.49□□□□□ -0.73
NEDD4-202ENST00000435532 COX7CP15954 63 aa10.49□□□□□ -0.73
NEDD4-202ENST00000435532 F8P00451 2351 aa10.49□□□□□ -0.73
NEDD4-202ENST00000435532 LINC00612Q8N6U2 182 aa10.48□□□□□ -0.73
NEDD4-202ENST00000435532 APLNQ9ULZ1 77 aa10.48□□□□□ -0.73
NEDD4-202ENST00000435532 Q6Q795 121 aa10.46□□□□□ -0.73
NEDD4-202ENST00000435532 TP53AIP1Q9HCN2 124 aa10.46□□□□□ -0.73
NEDD4-202ENST00000435532 CXCL6P80162 114 aa10.46□□□□□ -0.73
NEDD4-202ENST00000435532 IGKV2D-30A0A075B6S6 120 aa10.46□□□□□ -0.74
NEDD4-202ENST00000435532 IGKV2-30P06310 120 aa10.46□□□□□ -0.74
NEDD4-202ENST00000435532 PCOTHQ58A44 107 aa10.45□□□□□ -0.74
NEDD4-202ENST00000435532 LINC00313P59037 77 aa10.44□□□□□ -0.74
NEDD4-202ENST00000435532 LINC00476Q8WZB0 136 aa10.44□□□□□ -0.74
NEDD4-202ENST00000435532 BRK1Q8WUW1 75 aa10.43□□□□□ -0.74
NEDD4-202ENST00000435532 GIG44P09565 113 aaPredicted RBP10.43□□□□□ -0.74
NEDD4-202ENST00000435532 ATP11AUNQ6ZP68 121 aa10.43□□□□□ -0.74
NEDD4-202ENST00000435532 WDR87Q6ZQQ6 2873 aa10.43□□□□□ -0.74
NEDD4-202ENST00000435532 SPAG11AQ6PDA7 123 aa10.43□□□□□ -0.74
NEDD4-202ENST00000435532 PRR34Q9NV39 138 aa10.42□□□□□ -0.74
NEDD4-202ENST00000435532 hDV103S1A0JD37 113 aa10.42□□□□□ -0.74
NEDD4-202ENST00000435532 SPINK1P00995 79 aa10.41□□□□□ -0.74
NEDD4-202ENST00000435532 VPREB1P12018 145 aa10.41□□□□□ -0.74
NEDD4-202ENST00000435532 A6NED7 52 aa10.39□□□□□ -0.75
NEDD4-202ENST00000435532 HECTD1Q9ULT8 2610 aa10.39□□□□□ -0.75
NEDD4-202ENST00000435532 C7orf65Q6ZTY9 151 aa10.39□□□□□ -0.75
NEDD4-202ENST00000435532 IGLV1-50A0A075B6I6 118 aa10.38□□□□□ -0.75
NEDD4-202ENST00000435532 SOSTDC1Q6X4U4 206 aa10.38□□□□□ -0.75
NEDD4-202ENST00000435532 FAM168BA1KXE4 195 aa10.38□□□□□ -0.75
NEDD4-202ENST00000435532 A0A087WVE0 104 aa10.37□□□□□ -0.75
NEDD4-202ENST00000435532 LINC00304Q8N9R0 145 aa10.37□□□□□ -0.75
NEDD4-202ENST00000435532 TRBV7-7A0A0K0K1E9 115 aa10.37□□□□□ -0.75
NEDD4-202ENST00000435532 C8orf87E5RJ46 101 aa10.37□□□□□ -0.75
NEDD4-202ENST00000435532 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
NEDD4-202ENST00000435532 ST20-AS1Q8NBB2 130 aa10.37□□□□□ -0.75
NEDD4-202ENST00000435532 LINC00846Q9NV44 126 aa10.36□□□□□ -0.75
NEDD4-202ENST00000435532 C1orf64Q8NEQ6 169 aa10.36□□□□□ -0.75
NEDD4-202ENST00000435532 SVIPQ8NHG7 77 aa10.36□□□□□ -0.75
NEDD4-202ENST00000435532 ZNF861PO60384 105 aa10.36□□□□□ -0.75
NEDD4-202ENST00000435532 ZNF575Q86XF7 245 aa10.36□□□□□ -0.75
NEDD4-202ENST00000435532 C15orf56Q8N910 161 aa10.36□□□□□ -0.75
NEDD4-202ENST00000435532 IGLV6-57P01721 117 aa10.35□□□□□ -0.75
NEDD4-202ENST00000435532 Q96NJ1 140 aa10.35□□□□□ -0.75
NEDD4-202ENST00000435532 SERTAD4-AS1Q5TG53 156 aa10.35□□□□□ -0.75
NEDD4-202ENST00000435532 TLX1NBP0CAT3 122 aa10.34□□□□□ -0.75
NEDD4-202ENST00000435532 KCNQ1DNQ9H478 68 aa10.33□□□□□ -0.76
NEDD4-202ENST00000435532 SSBP3-AS1Q7Z2R9 100 aa10.33□□□□□ -0.76
NEDD4-202ENST00000435532 LOC110117498A0A087WWA1 95 aa10.33□□□□□ -0.76
NEDD4-202ENST00000435532 SMR3BP02814 79 aaPredicted RBP10.32□□□□□ -0.76
NEDD4-202ENST00000435532 PLA2G2DQ9UNK4 145 aa10.32□□□□□ -0.76
NEDD4-202ENST00000435532 TRBV7-4A0A0J9YYF1 115 aa10.3□□□□□ -0.76
NEDD4-202ENST00000435532 SMIM29Q86T20 159 aa10.3□□□□□ -0.76
NEDD4-202ENST00000435532 SETD2Q9BYW2 2564 aaPredicted RBP10.29□□□□□ -0.76
NEDD4-202ENST00000435532 ACANP16112 2415 aa10.29□□□□□ -0.76
NEDD4-202ENST00000435532 CNBPP62633 177 aaKnown RBP10.29□□□□□ -0.76
NEDD4-202ENST00000435532 COX6B2Q6YFQ2 88 aa10.29□□□□□ -0.76
NEDD4-202ENST00000435532 CASC10Q5T4H9 136 aa10.28□□□□□ -0.76
NEDD4-202ENST00000435532 Q6ZQT0 140 aa10.28□□□□□ -0.76
NEDD4-202ENST00000435532 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
NEDD4-202ENST00000435532 TMEM254Q8TBM7 123 aa10.28□□□□□ -0.76
NEDD4-202ENST00000435532 FAM218AQ96MZ4 157 aa10.28□□□□□ -0.76
NEDD4-202ENST00000435532 LINC00528Q8N1L1 170 aa10.27□□□□□ -0.77
NEDD4-202ENST00000435532 IGLV7-43P04211 117 aa10.27□□□□□ -0.77
NEDD4-202ENST00000435532 WIPF1O43516 503 aa10.26□□□□□ -0.77
NEDD4-202ENST00000435532 MUC4Q99102 2169 aa10.26□□□□□ -0.77
NEDD4-202ENST00000435532 H3BPC8 53 aa10.25□□□□□ -0.77
NEDD4-202ENST00000435532 ACYP2P14621 99 aa10.25□□□□□ -0.77
NEDD4-202ENST00000435532 SMIM26A0A096LP01 95 aa10.24□□□□□ -0.77
NEDD4-202ENST00000435532 CCDC179H3BU77 68 aa10.24□□□□□ -0.77
NEDD4-202ENST00000435532 SRCAPQ6ZRS2 3230 aa10.23□□□□□ -0.77
NEDD4-202ENST00000435532 HELZ2Q9BYK8 2649 aaKnown RBP10.23□□□□□ -0.77
NEDD4-202ENST00000435532 C9orf129Q5T035 196 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms