RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 Q8NDZ9 215 aa12.54□□□□□ -0.4
CLK1-205ENST00000434813 ORMDL1Q9P0S3 153 aa12.54□□□□□ -0.4
CLK1-205ENST00000434813 GAGE2AQ6NT46 116 aa12.54□□□□□ -0.4
CLK1-205ENST00000434813 RETNQ9HD89 108 aa12.54□□□□□ -0.4
CLK1-205ENST00000434813 GVQW2A0A096LPI5 108 aaPredicted RBP12.52□□□□□ -0.4
CLK1-205ENST00000434813 IMUPQ9GZP8 106 aa12.52□□□□□ -0.4
CLK1-205ENST00000434813 NCR3O14931 201 aa12.52□□□□□ -0.41
CLK1-205ENST00000434813 SLPIP03973 132 aa12.52□□□□□ -0.41
CLK1-205ENST00000434813 ANK2Q01484 3957 aa12.51□□□□□ -0.41
CLK1-205ENST00000434813 KPRPQ5T749 579 aaPredicted RBP12.51□□□□□ -0.41
CLK1-205ENST00000434813 Q8N814 137 aa12.51□□□□□ -0.41
CLK1-205ENST00000434813 LINC00526Q96FQ7 95 aa12.51□□□□□ -0.41
CLK1-205ENST00000434813 C14orf132Q9NPU4 83 aa12.51□□□□□ -0.41
CLK1-205ENST00000434813 CMYA5Q8N3K9 4069 aa12.5□□□□□ -0.41
CLK1-205ENST00000434813 WFDC10BQ8IUB3 73 aa12.49□□□□□ -0.41
CLK1-205ENST00000434813 Q6ZTC4 211 aa12.49□□□□□ -0.41
CLK1-205ENST00000434813 S100A7L2Q5SY68 101 aa12.48□□□□□ -0.41
CLK1-205ENST00000434813 C6orf99Q4VX62 202 aa12.47□□□□□ -0.41
CLK1-205ENST00000434813 C6orf48Q9UBA6 75 aa12.47□□□□□ -0.41
CLK1-205ENST00000434813 IGLV6-57P01721 117 aa12.45□□□□□ -0.42
CLK1-205ENST00000434813 TMEM256-PLSCR3K7ERE1 68 aa12.44□□□□□ -0.42
CLK1-205ENST00000434813 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
CLK1-205ENST00000434813 DNHD1Q96M86 4753 aa12.43□□□□□ -0.42
CLK1-205ENST00000434813 JMJD7-PLA2G4BH0Y9G9 81 aa12.42□□□□□ -0.42
CLK1-205ENST00000434813 RPL18AQ02543 176 aaKnown RBP12.42□□□□□ -0.42
CLK1-205ENST00000434813 LINC00575Q6W349 94 aa12.42□□□□□ -0.42
CLK1-205ENST00000434813 FAM236AA0A1B0GUQ0 79 aa12.4□□□□□ -0.42
CLK1-205ENST00000434813 FAM236BA0A1B0GV22 79 aa12.4□□□□□ -0.42
CLK1-205ENST00000434813 ZNF561-AS1K7EIQ3 104 aa12.4□□□□□ -0.42
CLK1-205ENST00000434813 ESRGQ1W209 222 aa12.4□□□□□ -0.42
CLK1-205ENST00000434813 LINC00846Q9NV44 126 aa12.39□□□□□ -0.43
CLK1-205ENST00000434813 CCKP06307 115 aa12.38□□□□□ -0.43
CLK1-205ENST00000434813 HIGD2BQ4VC39 106 aa12.38□□□□□ -0.43
CLK1-205ENST00000434813 CAMK2N2Q96S95 79 aa12.38□□□□□ -0.43
CLK1-205ENST00000434813 DNAH3Q8TD57 4116 aa12.38□□□□□ -0.43
CLK1-205ENST00000434813 PRB2P02812 416 aaPredicted RBP12.38□□□□□ -0.43
CLK1-205ENST00000434813 XAGE1AQ9HD64 81 aa12.38□□□□□ -0.43
CLK1-205ENST00000434813 CCDC179H3BU77 68 aa12.37□□□□□ -0.43
CLK1-205ENST00000434813 C15orf56Q8N910 161 aa12.37□□□□□ -0.43
CLK1-205ENST00000434813 hADV29S1A0JD25 119 aa12.37□□□□□ -0.43
CLK1-205ENST00000434813 LINC01556Q5JQF7 62 aa12.37□□□□□ -0.43
CLK1-205ENST00000434813 NOTCH1P46531 2555 aa12.36□□□□□ -0.43
CLK1-205ENST00000434813 DEFB131BA0A096LNP1 70 aa12.36□□□□□ -0.43
CLK1-205ENST00000434813 TRBV10-3A0A0K0K1G6 114 aa12.36□□□□□ -0.43
CLK1-205ENST00000434813 Q6JHZ5 121 aa12.36□□□□□ -0.43
CLK1-205ENST00000434813 C2orf48Q96LS8 159 aa12.36□□□□□ -0.43
CLK1-205ENST00000434813 C11orf45Q8TAV5 145 aa12.35□□□□□ -0.43
CLK1-205ENST00000434813 TRAV23DV6A0A075B6W5 121 aa12.35□□□□□ -0.43
CLK1-205ENST00000434813 C1orf43Q9BWL3 253 aa12.34□□□□□ -0.43
CLK1-205ENST00000434813 Q6ZRU5 148 aa12.33□□□□□ -0.43
CLK1-205ENST00000434813 DIRC1Q969H9 104 aa12.33□□□□□ -0.44
CLK1-205ENST00000434813 B5MCH6 92 aa12.32□□□□□ -0.44
CLK1-205ENST00000434813 VPREB1P12018 145 aa12.32□□□□□ -0.44
CLK1-205ENST00000434813 NBEAL1Q6ZS30 2694 aa12.32□□□□□ -0.44
CLK1-205ENST00000434813 MGAM2Q2M2H8 2515 aa12.32□□□□□ -0.44
CLK1-205ENST00000434813 K7EIL1 84 aa12.32□□□□□ -0.44
CLK1-205ENST00000434813 NDUFC2-KCTD14E9PQ53 114 aa12.31□□□□□ -0.44
CLK1-205ENST00000434813 TENM3Q9P273 2699 aa12.3□□□□□ -0.44
CLK1-205ENST00000434813 F8WDY8 70 aa12.3□□□□□ -0.44
CLK1-205ENST00000434813 MRAPQ8TCY5 172 aa12.3□□□□□ -0.44
CLK1-205ENST00000434813 ZNF73O43830 326 aaPredicted RBP12.3□□□□□ -0.44
CLK1-205ENST00000434813 H3BQ85 93 aa12.29□□□□□ -0.44
CLK1-205ENST00000434813 HIST1H4AP62805 103 aaKnown RBP12.29□□□□□ -0.44
CLK1-205ENST00000434813 IGKV2D-24A0A075B6R9 120 aa12.28□□□□□ -0.44
CLK1-205ENST00000434813 TRBV7-6A0A0J9YX20 115 aa12.28□□□□□ -0.44
CLK1-205ENST00000434813 DNAH10OSP0CZ25 163 aa12.28□□□□□ -0.44
CLK1-205ENST00000434813 Q6ZQY7 126 aa12.28□□□□□ -0.44
CLK1-205ENST00000434813 IGKV3D-7A0A0C4DH55 119 aa12.27□□□□□ -0.44
CLK1-205ENST00000434813 M0R378 163 aa12.27□□□□□ -0.44
CLK1-205ENST00000434813 TM2D3Q9BRN9 247 aa12.27□□□□□ -0.44
CLK1-205ENST00000434813 ELOF1P60002 83 aaKnown RBP12.27□□□□□ -0.45
CLK1-205ENST00000434813 LOC110117498A0A087WWA1 95 aa12.26□□□□□ -0.45
CLK1-205ENST00000434813 COX7BP24311 80 aa12.26□□□□□ -0.45
CLK1-205ENST00000434813 RBM3P98179 157 aaKnown RBP12.26□□□□□ -0.45
CLK1-205ENST00000434813 Q6ZQT0 140 aa12.25□□□□□ -0.45
CLK1-205ENST00000434813 LAMTOR3Q9UHA4 124 aa12.25□□□□□ -0.45
CLK1-205ENST00000434813 ATP5EP2Q5VTU8 51 aa12.24□□□□□ -0.45
CLK1-205ENST00000434813 SYCNQ0VAF6 134 aa12.23□□□□□ -0.45
CLK1-205ENST00000434813 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.23□□□□□ -0.45
CLK1-205ENST00000434813 Q6ZRP5 223 aa12.23□□□□□ -0.45
CLK1-205ENST00000434813 TRAV10A0A0B4J240 114 aa12.23□□□□□ -0.45
CLK1-205ENST00000434813 SS18L2Q9UHA2 77 aa12.23□□□□□ -0.45
CLK1-205ENST00000434813 ATOX1O00244 68 aa12.21□□□□□ -0.45
CLK1-205ENST00000434813 GHRHP01286 108 aa12.2□□□□□ -0.46
CLK1-205ENST00000434813 PDE6GP18545 87 aa12.19□□□□□ -0.46
CLK1-205ENST00000434813 C3orf22Q8N5N4 141 aa12.19□□□□□ -0.46
CLK1-205ENST00000434813 UBL5Q9BZL1 73 aa12.19□□□□□ -0.46
CLK1-205ENST00000434813 UQCRQO14949 82 aa12.18□□□□□ -0.46
CLK1-205ENST00000434813 LINC00528Q8N1L1 170 aa12.18□□□□□ -0.46
CLK1-205ENST00000434813 DSCR8Q96T75 97 aa12.18□□□□□ -0.46
CLK1-205ENST00000434813 LINC00588Q9Y4M8 146 aa12.18□□□□□ -0.46
CLK1-205ENST00000434813 A0A087WVE0 104 aa12.17□□□□□ -0.46
CLK1-205ENST00000434813 TLX1NBP0CAT3 122 aa12.15□□□□□ -0.46
CLK1-205ENST00000434813 COX7CP15954 63 aa12.15□□□□□ -0.47
CLK1-205ENST00000434813 TRBV7-4A0A0J9YYF1 115 aa12.13□□□□□ -0.47
CLK1-205ENST00000434813 M0R2N4 97 aa12.13□□□□□ -0.47
CLK1-205ENST00000434813 C9orf153Q5TBE3 101 aa12.13□□□□□ -0.47
CLK1-205ENST00000434813 NKAPP1Q8N9T2 125 aa12.12□□□□□ -0.47
CLK1-205ENST00000434813 USP17L23D6RBM5 183 aa12.11□□□□□ -0.47
CLK1-205ENST00000434813 SERTAD4-AS1Q5TG53 156 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms