RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 KIAA0087Q14695 138 aa5.09□□□□□ -1.59
COL17A1-204ENST00000433822 LINC00337Q8N6G1 96 aa5.09□□□□□ -1.59
COL17A1-204ENST00000433822 PRR34Q9NV39 138 aa5.09□□□□□ -1.59
COL17A1-204ENST00000433822 TOMM7Q9P0U1 55 aa5.09□□□□□ -1.59
COL17A1-204ENST00000433822 KLK5Q9Y337 293 aaPredicted RBP5.09□□□□□ -1.59
COL17A1-204ENST00000433822 TEX49A0A1B0GTD5 131 aa5.08□□□□□ -1.6
COL17A1-204ENST00000433822 MT-ATP8P03928 68 aa5.08□□□□□ -1.6
COL17A1-204ENST00000433822 DEFB135Q30KP9 77 aa5.08□□□□□ -1.6
COL17A1-204ENST00000433822 SDIM1Q6ZPB5 146 aa5.08□□□□□ -1.6
COL17A1-204ENST00000433822 C5orf38Q86SI9 138 aa5.08□□□□□ -1.6
COL17A1-204ENST00000433822 IMUPQ9GZP8 106 aa5.08□□□□□ -1.6
COL17A1-204ENST00000433822 HYDINQ4G0P3 5121 aa5.07□□□□□ -1.6
COL17A1-204ENST00000433822 GVQW2A0A096LPI5 108 aaPredicted RBP5.07□□□□□ -1.6
COL17A1-204ENST00000433822 SNCGO76070 127 aa5.07□□□□□ -1.6
COL17A1-204ENST00000433822 REG3AQ06141 175 aa5.07□□□□□ -1.6
COL17A1-204ENST00000433822 CHCHD10Q8WYQ3 142 aaPredicted RBP5.07□□□□□ -1.6
COL17A1-204ENST00000433822 C11orf68Q9H3H3 251 aaKnown RBP5.07□□□□□ -1.6
COL17A1-204ENST00000433822 COL7A1Q02388 2944 aa5.07□□□□□ -1.6
COL17A1-204ENST00000433822 IGKV3OR2-268A0A0C4DH90 116 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 A0A0J9YWU9 116 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 TRBV7-7A0A0K0K1E9 115 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 A0A0U1RRA0 63 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 F8WDY8 70 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 IGHV4-30-4P0DP06 118 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 XCL1P47992 114 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 CKS1BP61024 79 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 EGFEM1PQ0D2K5 195 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 CFAP161Q6P656 301 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 C3orf56Q8N813 242 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 OBSCN-AS1Q96MR7 158 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 LINC00167Q96N53 147 aa5.06□□□□□ -1.6
COL17A1-204ENST00000433822 A0A096LPF7 62 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 H3BQ85 93 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 DNAL4O96015 105 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 ANGP03950 147 aaKnown RBP5.05□□□□□ -1.6
COL17A1-204ENST00000433822 BAALC-AS2P0C853 105 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 MALP21145 153 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 LINC00269Q8N2A0 174 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 FAM218AQ96MZ4 157 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 TMEM126AQ9H061 195 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 CELA1Q9UNI1 258 aa5.05□□□□□ -1.6
COL17A1-204ENST00000433822 KRTAP10-11P60412 298 aa5.04□□□□□ -1.6
COL17A1-204ENST00000433822 GAGE2BQ13066 116 aa5.04□□□□□ -1.6
COL17A1-204ENST00000433822 GAGE2EQ4V326 116 aa5.04□□□□□ -1.6
COL17A1-204ENST00000433822 GAGE2DQ9UEU5 116 aa5.04□□□□□ -1.6
COL17A1-204ENST00000433822 C22orf24Q9Y442 160 aa5.04□□□□□ -1.6
COL17A1-204ENST00000433822 DYNC2H1Q8NCM8 4307 aaKnown RBP5.04□□□□□ -1.6
COL17A1-204ENST00000433822 SACSQ9NZJ4 4579 aa5.04□□□□□ -1.6
COL17A1-204ENST00000433822 PFN2P35080 140 aa5.03□□□□□ -1.6
COL17A1-204ENST00000433822 LINC00643Q86TS7 51 aa5.03□□□□□ -1.6
COL17A1-204ENST00000433822 C15orf53Q8NAA6 179 aa5.03□□□□□ -1.6
COL17A1-204ENST00000433822 RYR1P21817 5038 aa5.02□□□□□ -1.61
COL17A1-204ENST00000433822 JMJD7-PLA2G4BH0Y9G9 81 aa5.01□□□□□ -1.61
COL17A1-204ENST00000433822 NANOS2P60321 138 aaKnown RBP5.01□□□□□ -1.61
COL17A1-204ENST00000433822 SPAG11BQ08648 103 aa5.01□□□□□ -1.61
COL17A1-204ENST00000433822 LYPD5Q6UWN5 251 aa5.01□□□□□ -1.61
COL17A1-204ENST00000433822 ORMDL1Q9P0S3 153 aa5.01□□□□□ -1.61
COL17A1-204ENST00000433822 TENM2Q9NT68 2774 aa5□□□□□ -1.61
COL17A1-204ENST00000433822 A0A087WYN8 130 aa5□□□□□ -1.61
COL17A1-204ENST00000433822 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
COL17A1-204ENST00000433822 KRTAP29-1A8MX34 341 aaPredicted RBP5□□□□□ -1.61
COL17A1-204ENST00000433822 CLPSL2Q6UWE3 100 aa5□□□□□ -1.61
COL17A1-204ENST00000433822 ENHOQ6UWT2 76 aa5□□□□□ -1.61
COL17A1-204ENST00000433822 OR13C6PQ8NH95 151 aa5□□□□□ -1.61
COL17A1-204ENST00000433822 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
COL17A1-204ENST00000433822 TMEM256-PLSCR3K7ERE1 68 aa4.99□□□□□ -1.61
COL17A1-204ENST00000433822 LECT2O14960 151 aa4.99□□□□□ -1.61
COL17A1-204ENST00000433822 DEFB4AO15263 64 aa4.99□□□□□ -1.61
COL17A1-204ENST00000433822 NDUFV3P56181 108 aaKnown RBP4.99□□□□□ -1.61
COL17A1-204ENST00000433822 Q8N814 137 aa4.99□□□□□ -1.61
COL17A1-204ENST00000433822 C2orf48Q96LS8 159 aa4.99□□□□□ -1.61
COL17A1-204ENST00000433822 IGLV6-57P01721 117 aa4.98□□□□□ -1.61
COL17A1-204ENST00000433822 TTC32Q5I0X7 151 aa4.98□□□□□ -1.61
COL17A1-204ENST00000433822 LINC01556Q5JQF7 62 aa4.98□□□□□ -1.61
COL17A1-204ENST00000433822 KPRPQ5T749 579 aaPredicted RBP4.98□□□□□ -1.61
COL17A1-204ENST00000433822 KRTAP26-1Q6PEX3 210 aa4.98□□□□□ -1.61
COL17A1-204ENST00000433822 ANAPC13Q9BS18 74 aa4.98□□□□□ -1.61
COL17A1-204ENST00000433822 KLK12Q9UKR0 248 aa4.98□□□□□ -1.61
COL17A1-204ENST00000433822 DNAH9Q9NYC9 4486 aa4.97□□□□□ -1.61
COL17A1-204ENST00000433822 HERC2O95714 4834 aa4.97□□□□□ -1.61
COL17A1-204ENST00000433822 IGLV10-54A0A075B6I4 117 aa4.97□□□□□ -1.61
COL17A1-204ENST00000433822 S100A7L2Q5SY68 101 aa4.97□□□□□ -1.61
COL17A1-204ENST00000433822 LINC00575Q6W349 94 aa4.97□□□□□ -1.61
COL17A1-204ENST00000433822 Q9HAA7 133 aa4.97□□□□□ -1.61
COL17A1-204ENST00000433822 NHLRC4P0CG21 123 aaPredicted RBP4.96□□□□□ -1.62
COL17A1-204ENST00000433822 HTN3P15516 51 aa4.96□□□□□ -1.62
COL17A1-204ENST00000433822 PDE6GP18545 87 aa4.96□□□□□ -1.62
COL17A1-204ENST00000433822 ATP5EP2Q5VTU8 51 aa4.96□□□□□ -1.62
COL17A1-204ENST00000433822 Q6JHZ5 121 aa4.96□□□□□ -1.62
COL17A1-204ENST00000433822 UNQ6190/PRO20217Q6UXQ8 127 aa4.96□□□□□ -1.62
COL17A1-204ENST00000433822 CCKP06307 115 aa4.95□□□□□ -1.62
COL17A1-204ENST00000433822 DNAH10OSP0CZ25 163 aa4.95□□□□□ -1.62
COL17A1-204ENST00000433822 C10orf25Q5T742 122 aa4.95□□□□□ -1.62
COL17A1-204ENST00000433822 SMCR5Q8TEV8 140 aa4.95□□□□□ -1.62
COL17A1-204ENST00000433822 C6orf48Q9UBA6 75 aa4.95□□□□□ -1.62
COL17A1-204ENST00000433822 DNAH1Q9P2D7 4330 aa4.94□□□□□ -1.62
COL17A1-204ENST00000433822 ZNF561-AS1K7EIQ3 104 aa4.94□□□□□ -1.62
COL17A1-204ENST00000433822 PRB2P02812 416 aaPredicted RBP4.94□□□□□ -1.62
COL17A1-204ENST00000433822 C6orf99Q4VX62 202 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms