RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 J3QR89 54 aa12.96□□□□□ -0.33
VRK2-205ENST00000432057 Q6ZRU5 148 aa12.96□□□□□ -0.33
VRK2-205ENST00000432057 LINC01600Q96MT4 127 aa12.96□□□□□ -0.33
VRK2-205ENST00000432057 UPK3BQ9BT76 320 aa12.96□□□□□ -0.33
VRK2-205ENST00000432057 DYNC2H1Q8NCM8 4307 aaKnown RBP12.96□□□□□ -0.34
VRK2-205ENST00000432057 DNHD1Q96M86 4753 aa12.95□□□□□ -0.34
VRK2-205ENST00000432057 H3BT86 120 aa12.95□□□□□ -0.34
VRK2-205ENST00000432057 C2orf48Q96LS8 159 aa12.95□□□□□ -0.34
VRK2-205ENST00000432057 TRACP01848 142 aa12.93□□□□□ -0.34
VRK2-205ENST00000432057 XAGE1AQ9HD64 81 aa12.92□□□□□ -0.34
VRK2-205ENST00000432057 CASC10Q5T4H9 136 aa12.91□□□□□ -0.34
VRK2-205ENST00000432057 LYSTQ99698 3801 aa12.9□□□□□ -0.34
VRK2-205ENST00000432057 A0A087WYN8 130 aa12.9□□□□□ -0.34
VRK2-205ENST00000432057 TMEM126AQ9H061 195 aa12.89□□□□□ -0.35
VRK2-205ENST00000432057 H0YGX0 51 aa12.89□□□□□ -0.35
VRK2-205ENST00000432057 APLNQ9ULZ1 77 aa12.89□□□□□ -0.35
VRK2-205ENST00000432057 CBY1Q9Y3M2 126 aa12.89□□□□□ -0.35
VRK2-205ENST00000432057 TEX49A0A1B0GTD5 131 aa12.88□□□□□ -0.35
VRK2-205ENST00000432057 CSMD3Q7Z407 3707 aa12.87□□□□□ -0.35
VRK2-205ENST00000432057 RPL18AQ02543 176 aaKnown RBP12.87□□□□□ -0.35
VRK2-205ENST00000432057 SYCNQ0VAF6 134 aa12.87□□□□□ -0.35
VRK2-205ENST00000432057 S100A7L2Q5SY68 101 aa12.87□□□□□ -0.35
VRK2-205ENST00000432057 RMI2Q96E14 147 aa12.87□□□□□ -0.35
VRK2-205ENST00000432057 F8WDY8 70 aa12.87□□□□□ -0.35
VRK2-205ENST00000432057 USP17L23D6RBM5 183 aa12.86□□□□□ -0.35
VRK2-205ENST00000432057 NDUFC2-KCTD14E9PQ53 114 aa12.86□□□□□ -0.35
VRK2-205ENST00000432057 NHLRC4P0CG21 123 aaPredicted RBP12.86□□□□□ -0.35
VRK2-205ENST00000432057 UBE2DNLQ8IWF7 75 aa12.85□□□□□ -0.35
VRK2-205ENST00000432057 PRKDCP78527 4128 aaKnown RBP12.84□□□□□ -0.35
VRK2-205ENST00000432057 LECT2O14960 151 aa12.84□□□□□ -0.35
VRK2-205ENST00000432057 KRTAP1-5Q9BYS1 174 aa12.84□□□□□ -0.35
VRK2-205ENST00000432057 BAALC-AS2P0C853 105 aa12.83□□□□□ -0.36
VRK2-205ENST00000432057 GAGE2EQ4V326 116 aa12.83□□□□□ -0.36
VRK2-205ENST00000432057 GAGE2DQ9UEU5 116 aa12.83□□□□□ -0.36
VRK2-205ENST00000432057 DNAL4O96015 105 aa12.82□□□□□ -0.36
VRK2-205ENST00000432057 Q6ZRP5 223 aa12.82□□□□□ -0.36
VRK2-205ENST00000432057 IGLV6-57P01721 117 aa12.82□□□□□ -0.36
VRK2-205ENST00000432057 C6orf99Q4VX62 202 aa12.81□□□□□ -0.36
VRK2-205ENST00000432057 MEGF8Q7Z7M0 2845 aa12.81□□□□□ -0.36
VRK2-205ENST00000432057 SLPIP03973 132 aa12.8□□□□□ -0.36
VRK2-205ENST00000432057 VPREB1P12018 145 aa12.8□□□□□ -0.36
VRK2-205ENST00000432057 C22orf24Q9Y442 160 aa12.8□□□□□ -0.36
VRK2-205ENST00000432057 PLECQ15149 4684 aaKnown RBP12.8□□□□□ -0.36
VRK2-205ENST00000432057 DNAH7Q8WXX0 4024 aa12.79□□□□□ -0.36
VRK2-205ENST00000432057 TRBV10-3A0A0K0K1G6 114 aa12.79□□□□□ -0.36
VRK2-205ENST00000432057 DNAH10Q8IVF4 4471 aa12.78□□□□□ -0.36
VRK2-205ENST00000432057 NUPR2A6NF83 97 aa12.77□□□□□ -0.37
VRK2-205ENST00000432057 C9orf129Q5T035 196 aaKnown RBP12.77□□□□□ -0.37
VRK2-205ENST00000432057 CDIP1Q9H305 208 aa12.77□□□□□ -0.37
VRK2-205ENST00000432057 TENM2Q9NT68 2774 aa12.76□□□□□ -0.37
VRK2-205ENST00000432057 TRAV23DV6A0A075B6W5 121 aa12.74□□□□□ -0.37
VRK2-205ENST00000432057 Q8N814 137 aa12.74□□□□□ -0.37
VRK2-205ENST00000432057 A0A1B0GX51 115 aa12.73□□□□□ -0.37
VRK2-205ENST00000432057 M0R378 163 aa12.73□□□□□ -0.37
VRK2-205ENST00000432057 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
VRK2-205ENST00000432057 LINC00167Q96N53 147 aa12.73□□□□□ -0.37
VRK2-205ENST00000432057 STARD9Q9P2P6 4700 aa12.72□□□□□ -0.37
VRK2-205ENST00000432057 ORMDL1Q9P0S3 153 aa12.71□□□□□ -0.37
VRK2-205ENST00000432057 SERTAD4-AS1Q5TG53 156 aa12.7□□□□□ -0.38
VRK2-205ENST00000432057 LINC00575Q6W349 94 aa12.7□□□□□ -0.38
VRK2-205ENST00000432057 DIRC1Q969H9 104 aa12.7□□□□□ -0.38
VRK2-205ENST00000432057 PSCAO43653 123 aa12.69□□□□□ -0.38
VRK2-205ENST00000432057 SIGMAR1Q99720 223 aa12.69□□□□□ -0.38
VRK2-205ENST00000432057 ZNF73O43830 326 aaPredicted RBP12.68□□□□□ -0.38
VRK2-205ENST00000432057 NKAPP1Q8N9T2 125 aa12.66□□□□□ -0.38
VRK2-205ENST00000432057 XGP55808 180 aa12.65□□□□□ -0.38
VRK2-205ENST00000432057 GAGE2BQ13066 116 aa12.65□□□□□ -0.38
VRK2-205ENST00000432057 hADV29S1A0JD25 119 aa12.65□□□□□ -0.38
VRK2-205ENST00000432057 VPS13DQ5THJ4 4388 aa12.65□□□□□ -0.38
VRK2-205ENST00000432057 NBDYA0A0U1RRE5 68 aa12.64□□□□□ -0.39
VRK2-205ENST00000432057 FAM168BA1KXE4 195 aa12.64□□□□□ -0.39
VRK2-205ENST00000432057 SNCGO76070 127 aa12.64□□□□□ -0.39
VRK2-205ENST00000432057 LOC107984640A0A0U1RRK4 108 aa12.63□□□□□ -0.39
VRK2-205ENST00000432057 C7orf33Q8WU49 177 aa12.63□□□□□ -0.39
VRK2-205ENST00000432057 PLA2G2DQ9UNK4 145 aa12.63□□□□□ -0.39
VRK2-205ENST00000432057 INAFM2P0DMQ5 153 aa12.63□□□□□ -0.39
VRK2-205ENST00000432057 COX7BP24311 80 aa12.63□□□□□ -0.39
VRK2-205ENST00000432057 ELOF1P60002 83 aaKnown RBP12.62□□□□□ -0.39
VRK2-205ENST00000432057 TTC32Q5I0X7 151 aa12.62□□□□□ -0.39
VRK2-205ENST00000432057 A0A1B0GV72 72 aa12.61□□□□□ -0.39
VRK2-205ENST00000432057 FAM240AA0A1B0GVK7 77 aa12.61□□□□□ -0.39
VRK2-205ENST00000432057 MT-ATP8P03928 68 aa12.61□□□□□ -0.39
VRK2-205ENST00000432057 PCP4P48539 62 aa12.61□□□□□ -0.39
VRK2-205ENST00000432057 OBSCN-AS1Q96MR7 158 aa12.61□□□□□ -0.39
VRK2-205ENST00000432057 TRBV7-6A0A0J9YX20 115 aa12.6□□□□□ -0.39
VRK2-205ENST00000432057 C14orf132Q9NPU4 83 aa12.6□□□□□ -0.39
VRK2-205ENST00000432057 KRTAP7-1Q8IUC3 87 aa12.59□□□□□ -0.39
VRK2-205ENST00000432057 IGLV5-37A0A075B6J1 123 aa12.59□□□□□ -0.39
VRK2-205ENST00000432057 TMEM256-PLSCR3K7ERE1 68 aa12.59□□□□□ -0.39
VRK2-205ENST00000432057 CNBPP62633 177 aaKnown RBP12.59□□□□□ -0.39
VRK2-205ENST00000432057 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.58□□□□□ -0.4
VRK2-205ENST00000432057 FBN3Q75N90 2809 aa12.57□□□□□ -0.4
VRK2-205ENST00000432057 Q6ZQY7 126 aa12.57□□□□□ -0.4
VRK2-205ENST00000432057 FAM19A5Q7Z5A7 132 aaPredicted RBP12.57□□□□□ -0.4
VRK2-205ENST00000432057 KCNQ1DNQ9H478 68 aa12.57□□□□□ -0.4
VRK2-205ENST00000432057 C14orf177Q52M58 125 aa12.56□□□□□ -0.4
VRK2-205ENST00000432057 GAGE2AQ6NT46 116 aa12.56□□□□□ -0.4
VRK2-205ENST00000432057 LINC00528Q8N1L1 170 aa12.55□□□□□ -0.4
VRK2-205ENST00000432057 A0A096LNI7 61 aa12.55□□□□□ -0.4
VRK2-205ENST00000432057 RPL37AP8A6NKH3 93 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms