RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 SERTAD4-AS1Q5TG53 156 aa8.99□□□□□ -0.97
CSTF3-202ENST00000431742 SND1-IT1Q9HBX3 110 aa8.99□□□□□ -0.97
CSTF3-202ENST00000431742 PLA2G2DQ9UNK4 145 aa8.99□□□□□ -0.97
CSTF3-202ENST00000431742 TMA7Q9Y2S6 64 aaKnown RBP8.99□□□□□ -0.97
CSTF3-202ENST00000431742 SMIM13P0DJ93 91 aa8.98□□□□□ -0.97
CSTF3-202ENST00000431742 MEIG1Q5JSS6 88 aa8.98□□□□□ -0.97
CSTF3-202ENST00000431742 LINC00587B1AMM8 73 aa8.97□□□□□ -0.97
CSTF3-202ENST00000431742 LINC00158P58513 81 aa8.97□□□□□ -0.97
CSTF3-202ENST00000431742 PHF5AQ7RTV0 110 aaKnown RBP8.97□□□□□ -0.97
CSTF3-202ENST00000431742 C7orf33Q8WU49 177 aa8.97□□□□□ -0.97
CSTF3-202ENST00000431742 IGLV5-37A0A075B6J1 123 aa8.96□□□□□ -0.98
CSTF3-202ENST00000431742 A0A0J9YXY3 114 aa8.96□□□□□ -0.98
CSTF3-202ENST00000431742 A0A0U1RRA0 63 aa8.96□□□□□ -0.98
CSTF3-202ENST00000431742 M0QXV9 152 aa8.96□□□□□ -0.98
CSTF3-202ENST00000431742 PLA2G1BP04054 148 aaKnown RBP8.96□□□□□ -0.98
CSTF3-202ENST00000431742 RPL37AP61513 92 aaKnown RBP8.96□□□□□ -0.98
CSTF3-202ENST00000431742 MIR7-3HGQ8N6C7 128 aa8.95□□□□□ -0.98
CSTF3-202ENST00000431742 TTTY13Q9BZ97 58 aa8.95□□□□□ -0.98
CSTF3-202ENST00000431742 TP73-AS1Q9UF72 201 aa8.95□□□□□ -0.98
CSTF3-202ENST00000431742 ZNF815PA8K554 130 aa8.94□□□□□ -0.98
CSTF3-202ENST00000431742 SCGB1D1O95968 90 aa8.94□□□□□ -0.98
CSTF3-202ENST00000431742 Q8NDZ9 215 aa8.94□□□□□ -0.98
CSTF3-202ENST00000431742 C22orf24Q9Y442 160 aa8.94□□□□□ -0.98
CSTF3-202ENST00000431742 PCLOQ9Y6V0 5065 aa8.94□□□□□ -0.98
CSTF3-202ENST00000431742 VPREB1P12018 145 aa8.93□□□□□ -0.98
CSTF3-202ENST00000431742 PRR3P79522 188 aaKnown RBP8.93□□□□□ -0.98
CSTF3-202ENST00000431742 KRTAP11-1Q8IUC1 163 aa8.93□□□□□ -0.98
CSTF3-202ENST00000431742 LITAFQ99732 161 aa8.93□□□□□ -0.98
CSTF3-202ENST00000431742 LOC107984156A0A0G2JMH3 177 aa8.91□□□□□ -0.98
CSTF3-202ENST00000431742 TIMM17BO60830 172 aa8.91□□□□□ -0.98
CSTF3-202ENST00000431742 JOSD1Q15040 202 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-202ENST00000431742 ADAMTSL4-AS1Q5T5F5 129 aa8.91□□□□□ -0.98
CSTF3-202ENST00000431742 MRPL55Q7Z7F7 128 aaKnown RBP8.91□□□□□ -0.98
CSTF3-202ENST00000431742 PCP2Q8IVA1 136 aa8.91□□□□□ -0.98
CSTF3-202ENST00000431742 ARL17AQ8IVW1 177 aa8.91□□□□□ -0.98
CSTF3-202ENST00000431742 DAND5Q8N907 189 aa8.91□□□□□ -0.98
CSTF3-202ENST00000431742 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
CSTF3-202ENST00000431742 LBHQ53QV2 105 aaPredicted RBP8.9□□□□□ -0.98
CSTF3-202ENST00000431742 PSORS1C2Q9UIG4 136 aa8.9□□□□□ -0.98
CSTF3-202ENST00000431742 RPL24P83731 157 aaKnown RBP8.89□□□□□ -0.99
CSTF3-202ENST00000431742 NKAPP1Q8N9T2 125 aa8.89□□□□□ -0.99
CSTF3-202ENST00000431742 HNRNPA3P51991 378 aaKnown RBP8.88□□□□□ -0.99
CSTF3-202ENST00000431742 UBE2BP63146 152 aa8.88□□□□□ -0.99
CSTF3-202ENST00000431742 BOD1L2Q8IYS8 172 aa8.88□□□□□ -0.99
CSTF3-202ENST00000431742 LINC00167Q96N53 147 aa8.88□□□□□ -0.99
CSTF3-202ENST00000431742 SOSTDC1Q6X4U4 206 aa8.87□□□□□ -0.99
CSTF3-202ENST00000431742 EIF4EBP3O60516 100 aaPredicted RBP8.86□□□□□ -0.99
CSTF3-202ENST00000431742 INAFM2P0DMQ5 153 aa8.86□□□□□ -0.99
CSTF3-202ENST00000431742 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
CSTF3-202ENST00000431742 MYCBP2O75592 4640 aa8.86□□□□□ -0.99
CSTF3-202ENST00000431742 GAGE10A6NGK3 116 aa8.85□□□□□ -0.99
CSTF3-202ENST00000431742 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
CSTF3-202ENST00000431742 SCGB1D4Q6XE38 83 aa8.85□□□□□ -0.99
CSTF3-202ENST00000431742 TMEM238C9JI98 176 aa8.84□□□□□ -0.99
CSTF3-202ENST00000431742 LINC00308Q8TCZ7 52 aa8.84□□□□□ -0.99
CSTF3-202ENST00000431742 MIEN1Q9BRT3 115 aa8.84□□□□□ -0.99
CSTF3-202ENST00000431742 SPANXDQ9BXN6 97 aa8.84□□□□□ -0.99
CSTF3-202ENST00000431742 SPANXCQ9NY87 97 aa8.84□□□□□ -0.99
CSTF3-202ENST00000431742 FAT3Q8TDW7 4589 aa8.83□□□□□ -1
CSTF3-202ENST00000431742 RPL37AP8A6NKH3 93 aa8.83□□□□□ -1
CSTF3-202ENST00000431742 M0R378 163 aa8.83□□□□□ -1
CSTF3-202ENST00000431742 NDUFC2O95298 119 aa8.83□□□□□ -1
CSTF3-202ENST00000431742 NPC2P61916 151 aa8.83□□□□□ -1
CSTF3-202ENST00000431742 C1orf137Q5JT78 98 aa8.83□□□□□ -1
CSTF3-202ENST00000431742 VAMP8Q9BV40 100 aa8.83□□□□□ -1
CSTF3-202ENST00000431742 IGLV1-50A0A075B6I6 118 aa8.82□□□□□ -1
CSTF3-202ENST00000431742 COX8AP10176 69 aa8.82□□□□□ -1
CSTF3-202ENST00000431742 PPDPFQ9H3Y8 114 aa8.82□□□□□ -1
CSTF3-202ENST00000431742 PAM16Q9Y3D7 125 aa8.82□□□□□ -1
CSTF3-202ENST00000431742 IGKV2-28A0A075B6P5 120 aa8.81□□□□□ -1
CSTF3-202ENST00000431742 TRBV10-2A0A0K0K1G8 114 aa8.81□□□□□ -1
CSTF3-202ENST00000431742 NCR3O14931 201 aa8.81□□□□□ -1
CSTF3-202ENST00000431742 DLEU1O43261 78 aa8.81□□□□□ -1
CSTF3-202ENST00000431742 IGKV2D-28P01615 120 aa8.81□□□□□ -1
CSTF3-202ENST00000431742 IGLV7-43P04211 117 aa8.81□□□□□ -1
CSTF3-202ENST00000431742 SRSF9Q13242 221 aaKnown RBP eCLIP8.81□□□□□ -1
CSTF3-202ENST00000431742 SPATA45Q537H7 98 aa8.81□□□□□ -1
CSTF3-202ENST00000431742 SPANXB1Q9NS25 103 aaPredicted RBP8.81□□□□□ -1
CSTF3-202ENST00000431742 Q6ZVH6 145 aa8.8□□□□□ -1
CSTF3-202ENST00000431742 LRP1Q07954 4544 aaKnown RBP8.8□□□□□ -1
CSTF3-202ENST00000431742 BCE1O60756 84 aa8.78□□□□□ -1
CSTF3-202ENST00000431742 IFITM1P13164 125 aa8.78□□□□□ -1
CSTF3-202ENST00000431742 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
CSTF3-202ENST00000431742 TRBV10-3A0A0K0K1G6 114 aa8.77□□□□□ -1.01
CSTF3-202ENST00000431742 COPS9Q8WXC6 57 aa8.77□□□□□ -1.01
CSTF3-202ENST00000431742 TMEM126AQ9H061 195 aa8.77□□□□□ -1.01
CSTF3-202ENST00000431742 PRYO14603 147 aa8.76□□□□□ -1.01
CSTF3-202ENST00000431742 IGLV6-57P01721 117 aa8.76□□□□□ -1.01
CSTF3-202ENST00000431742 REG3GQ6UW15 175 aa8.76□□□□□ -1.01
CSTF3-202ENST00000431742 KRTAP13-1Q8IUC0 172 aa8.76□□□□□ -1.01
CSTF3-202ENST00000431742 C14orf144Q96I85 54 aa8.76□□□□□ -1.01
CSTF3-202ENST00000431742 KCNQ1DNQ9H478 68 aa8.76□□□□□ -1.01
CSTF3-202ENST00000431742 MUSTN1Q8IVN3 82 aa8.75□□□□□ -1.01
CSTF3-202ENST00000431742 ZNF861PO60384 105 aa8.74□□□□□ -1.01
CSTF3-202ENST00000431742 DDTP30046 118 aa8.74□□□□□ -1.01
CSTF3-202ENST00000431742 SPRR1AP35321 89 aa8.74□□□□□ -1.01
CSTF3-202ENST00000431742 SLC25A34Q6PIV7 304 aa8.74□□□□□ -1.01
CSTF3-202ENST00000431742 C2orf91Q6ZV80 131 aa8.73□□□□□ -1.01
CSTF3-202ENST00000431742 HIGD1BQ9P298 99 aa8.73□□□□□ -1.01
CSTF3-202ENST00000431742 LOC100996750A0A140TA64 210 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 723.9 ms