RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 RPL37AP61513 92 aaKnown RBP9.32□□□□□ -0.92
GARNL3-204ENST00000429629 RPL24P83731 157 aaKnown RBP9.32□□□□□ -0.92
GARNL3-204ENST00000429629 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
GARNL3-204ENST00000429629 HSBP1L1C9JCN9 74 aa9.31□□□□□ -0.92
GARNL3-204ENST00000429629 M0QXV9 152 aa9.31□□□□□ -0.92
GARNL3-204ENST00000429629 SCGB1D1O95968 90 aa9.31□□□□□ -0.92
GARNL3-204ENST00000429629 ANKRD39Q53RE8 183 aa9.31□□□□□ -0.92
GARNL3-204ENST00000429629 SERTAD4-AS1Q5TG53 156 aa9.31□□□□□ -0.92
GARNL3-204ENST00000429629 FAM19A5Q7Z5A7 132 aaPredicted RBP9.31□□□□□ -0.92
GARNL3-204ENST00000429629 ATOH7Q8N100 152 aa9.31□□□□□ -0.92
GARNL3-204ENST00000429629 MIR7-3HGQ8N6C7 128 aa9.31□□□□□ -0.92
GARNL3-204ENST00000429629 SRRM2Q9UQ35 2752 aaKnown RBP9.3□□□□□ -0.92
GARNL3-204ENST00000429629 PHF5AQ7RTV0 110 aaKnown RBP9.3□□□□□ -0.92
GARNL3-204ENST00000429629 KRTAP4-5Q9BYR2 181 aa9.3□□□□□ -0.92
GARNL3-204ENST00000429629 ZNF815PA8K554 130 aa9.29□□□□□ -0.92
GARNL3-204ENST00000429629 VPREB1P12018 145 aa9.29□□□□□ -0.92
GARNL3-204ENST00000429629 JOSD1Q15040 202 aaPredicted RBP9.29□□□□□ -0.92
GARNL3-204ENST00000429629 MRPL55Q7Z7F7 128 aaKnown RBP9.29□□□□□ -0.92
GARNL3-204ENST00000429629 VPS13BQ7Z7G8 4022 aa9.28□□□□□ -0.92
GARNL3-204ENST00000429629 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
GARNL3-204ENST00000429629 PRR3P79522 188 aaKnown RBP9.27□□□□□ -0.93
GARNL3-204ENST00000429629 NKAPP1Q8N9T2 125 aa9.27□□□□□ -0.93
GARNL3-204ENST00000429629 LITAFQ99732 161 aa9.26□□□□□ -0.93
GARNL3-204ENST00000429629 PPDPFQ9H3Y8 114 aa9.26□□□□□ -0.93
GARNL3-204ENST00000429629 TMA7Q9Y2S6 64 aaKnown RBP9.26□□□□□ -0.93
GARNL3-204ENST00000429629 ADAMTSL4-AS1Q5T5F5 129 aa9.25□□□□□ -0.93
GARNL3-204ENST00000429629 Q6ZVH6 145 aa9.25□□□□□ -0.93
GARNL3-204ENST00000429629 LINC00167Q96N53 147 aa9.25□□□□□ -0.93
GARNL3-204ENST00000429629 PSORS1C2Q9UIG4 136 aa9.25□□□□□ -0.93
GARNL3-204ENST00000429629 NDUFC2O95298 119 aa9.24□□□□□ -0.93
GARNL3-204ENST00000429629 UBE2BP63146 152 aa9.24□□□□□ -0.93
GARNL3-204ENST00000429629 PCP2Q8IVA1 136 aa9.24□□□□□ -0.93
GARNL3-204ENST00000429629 BOD1L2Q8IYS8 172 aa9.24□□□□□ -0.93
GARNL3-204ENST00000429629 TTTY13Q9BZ97 58 aa9.24□□□□□ -0.93
GARNL3-204ENST00000429629 M0R378 163 aa9.23□□□□□ -0.93
GARNL3-204ENST00000429629 INAFM2P0DMQ5 153 aa9.23□□□□□ -0.93
GARNL3-204ENST00000429629 SCGB1D4Q6XE38 83 aa9.23□□□□□ -0.93
GARNL3-204ENST00000429629 MIEN1Q9BRT3 115 aa9.23□□□□□ -0.93
GARNL3-204ENST00000429629 TRBV10-2A0A0K0K1G8 114 aa9.22□□□□□ -0.93
GARNL3-204ENST00000429629 TMEM238C9JI98 176 aa9.22□□□□□ -0.93
GARNL3-204ENST00000429629 DLEU1O43261 78 aa9.22□□□□□ -0.93
GARNL3-204ENST00000429629 SRSF9Q13242 221 aaKnown RBP eCLIP9.22□□□□□ -0.93
GARNL3-204ENST00000429629 Q8NDZ9 215 aa9.22□□□□□ -0.93
GARNL3-204ENST00000429629 COPS9Q8WXC6 57 aa9.22□□□□□ -0.93
GARNL3-204ENST00000429629 SPANXDQ9BXN6 97 aa9.22□□□□□ -0.93
GARNL3-204ENST00000429629 SPANXCQ9NY87 97 aa9.22□□□□□ -0.93
GARNL3-204ENST00000429629 IGLV1-50A0A075B6I6 118 aa9.21□□□□□ -0.94
GARNL3-204ENST00000429629 IFITM1P13164 125 aa9.21□□□□□ -0.94
GARNL3-204ENST00000429629 KRTAP11-1Q8IUC1 163 aa9.21□□□□□ -0.94
GARNL3-204ENST00000429629 DAND5Q8N907 189 aa9.21□□□□□ -0.94
GARNL3-204ENST00000429629 SPINK6Q6UWN8 80 aa9.2□□□□□ -0.94
GARNL3-204ENST00000429629 LINC00308Q8TCZ7 52 aa9.2□□□□□ -0.94
GARNL3-204ENST00000429629 COX8AP10176 69 aa9.19□□□□□ -0.94
GARNL3-204ENST00000429629 C1orf137Q5JT78 98 aa9.19□□□□□ -0.94
GARNL3-204ENST00000429629 SOSTDC1Q6X4U4 206 aa9.19□□□□□ -0.94
GARNL3-204ENST00000429629 ABCA13Q86UQ4 5058 aa9.19□□□□□ -0.94
GARNL3-204ENST00000429629 IGLV7-43P04211 117 aa9.18□□□□□ -0.94
GARNL3-204ENST00000429629 PYY3Q5JQD4 70 aa9.18□□□□□ -0.94
GARNL3-204ENST00000429629 VAMP8Q9BV40 100 aa9.18□□□□□ -0.94
GARNL3-204ENST00000429629 SPANXB1Q9NS25 103 aaPredicted RBP9.18□□□□□ -0.94
GARNL3-204ENST00000429629 GAGE10A6NGK3 116 aa9.17□□□□□ -0.94
GARNL3-204ENST00000429629 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
GARNL3-204ENST00000429629 BCE1O60756 84 aa9.17□□□□□ -0.94
GARNL3-204ENST00000429629 EIF4EBP3O60516 100 aaPredicted RBP9.16□□□□□ -0.94
GARNL3-204ENST00000429629 LINC00518Q8N0U6 118 aa9.16□□□□□ -0.94
GARNL3-204ENST00000429629 KCNQ1DNQ9H478 68 aa9.16□□□□□ -0.94
GARNL3-204ENST00000429629 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.94
GARNL3-204ENST00000429629 SPATA45Q537H7 98 aa9.15□□□□□ -0.94
GARNL3-204ENST00000429629 CBY1Q9Y3M2 126 aa9.15□□□□□ -0.94
GARNL3-204ENST00000429629 ZNF861PO60384 105 aa9.14□□□□□ -0.95
GARNL3-204ENST00000429629 S100A12P80511 92 aa9.14□□□□□ -0.95
GARNL3-204ENST00000429629 PAM16Q9Y3D7 125 aa9.14□□□□□ -0.95
GARNL3-204ENST00000429629 IGKV2-28A0A075B6P5 120 aa9.13□□□□□ -0.95
GARNL3-204ENST00000429629 IGKV2D-28P01615 120 aa9.13□□□□□ -0.95
GARNL3-204ENST00000429629 IGLV6-57P01721 117 aa9.13□□□□□ -0.95
GARNL3-204ENST00000429629 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
GARNL3-204ENST00000429629 DIRC1Q969H9 104 aa9.13□□□□□ -0.95
GARNL3-204ENST00000429629 TMEM126AQ9H061 195 aa9.13□□□□□ -0.95
GARNL3-204ENST00000429629 PRYO14603 147 aa9.12□□□□□ -0.95
GARNL3-204ENST00000429629 NCR3O14931 201 aa9.12□□□□□ -0.95
GARNL3-204ENST00000429629 OXTP01178 125 aa9.12□□□□□ -0.95
GARNL3-204ENST00000429629 SPRR1AP35321 89 aa9.12□□□□□ -0.95
GARNL3-204ENST00000429629 RPL28P46779 137 aaKnown RBP9.12□□□□□ -0.95
GARNL3-204ENST00000429629 HIGD1BQ9P298 99 aa9.12□□□□□ -0.95
GARNL3-204ENST00000429629 PCLOQ9Y6V0 5065 aa9.12□□□□□ -0.95
GARNL3-204ENST00000429629 TRBV10-3A0A0K0K1G6 114 aa9.11□□□□□ -0.95
GARNL3-204ENST00000429629 H0Y9J4 135 aa9.11□□□□□ -0.95
GARNL3-204ENST00000429629 DDTP30046 118 aa9.11□□□□□ -0.95
GARNL3-204ENST00000429629 NPC2P61916 151 aa9.11□□□□□ -0.95
GARNL3-204ENST00000429629 SLC25A34Q6PIV7 304 aa9.11□□□□□ -0.95
GARNL3-204ENST00000429629 MUSTN1Q8IVN3 82 aa9.11□□□□□ -0.95
GARNL3-204ENST00000429629 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
GARNL3-204ENST00000429629 KRTAP29-1A8MX34 341 aaPredicted RBP9.1□□□□□ -0.95
GARNL3-204ENST00000429629 S100A7L2Q5SY68 101 aa9.1□□□□□ -0.95
GARNL3-204ENST00000429629 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
GARNL3-204ENST00000429629 LINC00337Q8N6G1 96 aa9.1□□□□□ -0.95
GARNL3-204ENST00000429629 KRTAP4-16G5E9R7 235 aaPredicted RBP9.08□□□□□ -0.96
GARNL3-204ENST00000429629 MYCBP2O75592 4640 aa9.08□□□□□ -0.96
GARNL3-204ENST00000429629 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
GARNL3-204ENST00000429629 UBE2AP49459 152 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms