RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 M0QXV9 152 aa6.91□□□□□ -1.3
HDAC9-210ENST00000428307 NDUFC2O95298 119 aa6.91□□□□□ -1.3
HDAC9-210ENST00000428307 Q6ZRU5 148 aa6.9□□□□□ -1.3
HDAC9-210ENST00000428307 A0A087WYN8 130 aa6.9□□□□□ -1.31
HDAC9-210ENST00000428307 GVQW2A0A096LPI5 108 aaPredicted RBP6.9□□□□□ -1.31
HDAC9-210ENST00000428307 H3BT86 120 aa6.9□□□□□ -1.31
HDAC9-210ENST00000428307 TMEM126AQ9H061 195 aa6.89□□□□□ -1.31
HDAC9-210ENST00000428307 LYSTQ99698 3801 aa6.89□□□□□ -1.31
HDAC9-210ENST00000428307 TENM2Q9NT68 2774 aa6.89□□□□□ -1.31
HDAC9-210ENST00000428307 TRACP01848 142 aa6.89□□□□□ -1.31
HDAC9-210ENST00000428307 S100A7L2Q5SY68 101 aa6.89□□□□□ -1.31
HDAC9-210ENST00000428307 B9D2Q9BPU9 175 aa6.89□□□□□ -1.31
HDAC9-210ENST00000428307 BAALC-AS2P0C853 105 aa6.88□□□□□ -1.31
HDAC9-210ENST00000428307 RPL18AQ02543 176 aaKnown RBP6.88□□□□□ -1.31
HDAC9-210ENST00000428307 CASC10Q5T4H9 136 aa6.88□□□□□ -1.31
HDAC9-210ENST00000428307 H0YGX0 51 aa6.88□□□□□ -1.31
HDAC9-210ENST00000428307 LINC01600Q96MT4 127 aa6.88□□□□□ -1.31
HDAC9-210ENST00000428307 LECT2O14960 151 aa6.87□□□□□ -1.31
HDAC9-210ENST00000428307 GAGE2EQ4V326 116 aa6.87□□□□□ -1.31
HDAC9-210ENST00000428307 GAGE2DQ9UEU5 116 aa6.87□□□□□ -1.31
HDAC9-210ENST00000428307 DNAL4O96015 105 aa6.87□□□□□ -1.31
HDAC9-210ENST00000428307 MUC7Q8TAX7 377 aa6.87□□□□□ -1.31
HDAC9-210ENST00000428307 C2orf48Q96LS8 159 aa6.87□□□□□ -1.31
HDAC9-210ENST00000428307 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
HDAC9-210ENST00000428307 SLPIP03973 132 aa6.86□□□□□ -1.31
HDAC9-210ENST00000428307 SYCNQ0VAF6 134 aa6.86□□□□□ -1.31
HDAC9-210ENST00000428307 C6orf99Q4VX62 202 aa6.86□□□□□ -1.31
HDAC9-210ENST00000428307 NDUFC2-KCTD14E9PQ53 114 aa6.84□□□□□ -1.31
HDAC9-210ENST00000428307 Q6ZRP5 223 aa6.84□□□□□ -1.31
HDAC9-210ENST00000428307 UPK3BQ9BT76 320 aa6.84□□□□□ -1.31
HDAC9-210ENST00000428307 CDIP1Q9H305 208 aa6.84□□□□□ -1.31
HDAC9-210ENST00000428307 USP17L23D6RBM5 183 aa6.84□□□□□ -1.31
HDAC9-210ENST00000428307 PCP4P48539 62 aa6.84□□□□□ -1.31
HDAC9-210ENST00000428307 TRBV10-3A0A0K0K1G6 114 aa6.83□□□□□ -1.32
HDAC9-210ENST00000428307 SIGMAR1Q99720 223 aa6.83□□□□□ -1.32
HDAC9-210ENST00000428307 C22orf24Q9Y442 160 aa6.83□□□□□ -1.32
HDAC9-210ENST00000428307 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
HDAC9-210ENST00000428307 IGLV6-57P01721 117 aa6.83□□□□□ -1.32
HDAC9-210ENST00000428307 KRTAP1-5Q9BYS1 174 aa6.83□□□□□ -1.32
HDAC9-210ENST00000428307 UBE2DNLQ8IWF7 75 aa6.82□□□□□ -1.32
HDAC9-210ENST00000428307 APLNQ9ULZ1 77 aa6.82□□□□□ -1.32
HDAC9-210ENST00000428307 MEGF8Q7Z7M0 2845 aa6.82□□□□□ -1.32
HDAC9-210ENST00000428307 RMI2Q96E14 147 aa6.82□□□□□ -1.32
HDAC9-210ENST00000428307 VPREB1P12018 145 aa6.81□□□□□ -1.32
HDAC9-210ENST00000428307 Q8N814 137 aa6.81□□□□□ -1.32
HDAC9-210ENST00000428307 DNHD1Q96M86 4753 aa6.81□□□□□ -1.32
HDAC9-210ENST00000428307 A0A1B0GV72 72 aa6.8□□□□□ -1.32
HDAC9-210ENST00000428307 C9orf129Q5T035 196 aaKnown RBP6.8□□□□□ -1.32
HDAC9-210ENST00000428307 XGP55808 180 aa6.8□□□□□ -1.32
HDAC9-210ENST00000428307 F8WDY8 70 aa6.79□□□□□ -1.32
HDAC9-210ENST00000428307 TRAV23DV6A0A075B6W5 121 aa6.79□□□□□ -1.32
HDAC9-210ENST00000428307 MT-ATP8P03928 68 aa6.79□□□□□ -1.32
HDAC9-210ENST00000428307 NHLRC4P0CG21 123 aaPredicted RBP6.79□□□□□ -1.32
HDAC9-210ENST00000428307 ORMDL1Q9P0S3 153 aa6.79□□□□□ -1.32
HDAC9-210ENST00000428307 DNAH7Q8WXX0 4024 aa6.78□□□□□ -1.32
HDAC9-210ENST00000428307 PRKDCP78527 4128 aaKnown RBP6.78□□□□□ -1.32
HDAC9-210ENST00000428307 M0R378 163 aa6.77□□□□□ -1.32
HDAC9-210ENST00000428307 LINC00575Q6W349 94 aa6.77□□□□□ -1.32
HDAC9-210ENST00000428307 PSCAO43653 123 aa6.77□□□□□ -1.33
HDAC9-210ENST00000428307 ZNF73O43830 326 aaPredicted RBP6.77□□□□□ -1.33
HDAC9-210ENST00000428307 SERTAD4-AS1Q5TG53 156 aa6.77□□□□□ -1.33
HDAC9-210ENST00000428307 DNAH1Q9P2D7 4330 aa6.77□□□□□ -1.33
HDAC9-210ENST00000428307 GAGE2BQ13066 116 aa6.76□□□□□ -1.33
HDAC9-210ENST00000428307 DIRC1Q969H9 104 aa6.76□□□□□ -1.33
HDAC9-210ENST00000428307 A0A1B0GX51 115 aa6.76□□□□□ -1.33
HDAC9-210ENST00000428307 hADV29S1A0JD25 119 aa6.76□□□□□ -1.33
HDAC9-210ENST00000428307 SNCGO76070 127 aa6.76□□□□□ -1.33
HDAC9-210ENST00000428307 C14orf132Q9NPU4 83 aa6.76□□□□□ -1.33
HDAC9-210ENST00000428307 FAM168BA1KXE4 195 aa6.75□□□□□ -1.33
HDAC9-210ENST00000428307 NUPR2A6NF83 97 aa6.75□□□□□ -1.33
HDAC9-210ENST00000428307 NKAPP1Q8N9T2 125 aa6.75□□□□□ -1.33
HDAC9-210ENST00000428307 LINC00167Q96N53 147 aa6.75□□□□□ -1.33
HDAC9-210ENST00000428307 DNAH10Q8IVF4 4471 aa6.75□□□□□ -1.33
HDAC9-210ENST00000428307 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
HDAC9-210ENST00000428307 INAFM2P0DMQ5 153 aa6.74□□□□□ -1.33
HDAC9-210ENST00000428307 GAGE2AQ6NT46 116 aa6.74□□□□□ -1.33
HDAC9-210ENST00000428307 TMEM256-PLSCR3K7ERE1 68 aa6.73□□□□□ -1.33
HDAC9-210ENST00000428307 Q6ZQY7 126 aa6.73□□□□□ -1.33
HDAC9-210ENST00000428307 PLECQ15149 4684 aaKnown RBP6.73□□□□□ -1.33
HDAC9-210ENST00000428307 FAM240AA0A1B0GVK7 77 aa6.73□□□□□ -1.33
HDAC9-210ENST00000428307 COX7BP24311 80 aa6.73□□□□□ -1.33
HDAC9-210ENST00000428307 C7orf33Q8WU49 177 aa6.73□□□□□ -1.33
HDAC9-210ENST00000428307 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
HDAC9-210ENST00000428307 RPL37AP8A6NKH3 93 aa6.72□□□□□ -1.33
HDAC9-210ENST00000428307 TTC32Q5I0X7 151 aa6.72□□□□□ -1.33
HDAC9-210ENST00000428307 ELOF1P60002 83 aaKnown RBP6.72□□□□□ -1.33
HDAC9-210ENST00000428307 OBSCN-AS1Q96MR7 158 aa6.72□□□□□ -1.33
HDAC9-210ENST00000428307 NBDYA0A0U1RRE5 68 aa6.71□□□□□ -1.34
HDAC9-210ENST00000428307 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
HDAC9-210ENST00000428307 FAM19A5Q7Z5A7 132 aaPredicted RBP6.71□□□□□ -1.34
HDAC9-210ENST00000428307 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
HDAC9-210ENST00000428307 M0R2N4 97 aa6.7□□□□□ -1.34
HDAC9-210ENST00000428307 ACYP1P07311 99 aa6.7□□□□□ -1.34
HDAC9-210ENST00000428307 IGKV2-24A0A0C4DH68 120 aa6.69□□□□□ -1.34
HDAC9-210ENST00000428307 DYNC2H1Q8NCM8 4307 aaKnown RBP6.69□□□□□ -1.34
HDAC9-210ENST00000428307 STARD9Q9P2P6 4700 aa6.69□□□□□ -1.34
HDAC9-210ENST00000428307 LAMTOR3Q9UHA4 124 aa6.69□□□□□ -1.34
HDAC9-210ENST00000428307 LINC00528Q8N1L1 170 aa6.68□□□□□ -1.34
HDAC9-210ENST00000428307 SMCR5Q8TEV8 140 aa6.68□□□□□ -1.34
HDAC9-210ENST00000428307 KCNQ1DNQ9H478 68 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms