RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 VAMP8Q9BV40 100 aa4.49□□□□□ -1.69
CDC7-203ENST00000428239 TTTY13Q9BZ97 58 aa4.49□□□□□ -1.69
CDC7-203ENST00000428239 MIR7-3HGQ8N6C7 128 aa4.49□□□□□ -1.69
CDC7-203ENST00000428239 PANO1I0J062 215 aa4.49□□□□□ -1.69
CDC7-203ENST00000428239 MTURNQ8N3F0 131 aa4.49□□□□□ -1.69
CDC7-203ENST00000428239 DNAH10Q8IVF4 4471 aa4.49□□□□□ -1.69
CDC7-203ENST00000428239 TSPEAR-AS2P59090 65 aa4.48□□□□□ -1.69
CDC7-203ENST00000428239 LINC00528Q8N1L1 170 aa4.48□□□□□ -1.69
CDC7-203ENST00000428239 FAM168BA1KXE4 195 aa4.48□□□□□ -1.69
CDC7-203ENST00000428239 EPM2AB3EWF7 344 aa4.48□□□□□ -1.69
CDC7-203ENST00000428239 SRSF9Q13242 221 aaKnown RBP eCLIP4.48□□□□□ -1.69
CDC7-203ENST00000428239 RPL24P83731 157 aaKnown RBP4.47□□□□□ -1.69
CDC7-203ENST00000428239 SPACA4Q8TDM5 124 aa4.47□□□□□ -1.69
CDC7-203ENST00000428239 CDK2AP2O75956 126 aa4.47□□□□□ -1.69
CDC7-203ENST00000428239 JOSD1Q15040 202 aaPredicted RBP4.47□□□□□ -1.69
CDC7-203ENST00000428239 IGKV2D-26A0A0A0MRZ7 120 aa4.47□□□□□ -1.69
CDC7-203ENST00000428239 PHF5AQ7RTV0 110 aaKnown RBP4.47□□□□□ -1.69
CDC7-203ENST00000428239 OR13C6PQ8NH95 151 aa4.47□□□□□ -1.69
CDC7-203ENST00000428239 SND1-IT1Q9HBX3 110 aa4.47□□□□□ -1.69
CDC7-203ENST00000428239 PCP2Q8IVA1 136 aa4.46□□□□□ -1.69
CDC7-203ENST00000428239 PPDPFQ9H3Y8 114 aa4.46□□□□□ -1.69
CDC7-203ENST00000428239 DNAH2Q9P225 4427 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 A0A1W2PNN7 141 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.7
CDC7-203ENST00000428239 XGP55808 180 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 RPL37AP61513 92 aaKnown RBP4.46□□□□□ -1.7
CDC7-203ENST00000428239 COX17Q14061 63 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 SPATA45Q537H7 98 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 A0A0J9YXY3 114 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 RPL37AP8A6NKH3 93 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 NCR3O14931 201 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 BATFQ16520 125 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 S100A7L2Q5SY68 101 aa4.46□□□□□ -1.7
CDC7-203ENST00000428239 IGKV2-28A0A075B6P5 120 aa4.45□□□□□ -1.7
CDC7-203ENST00000428239 IGKV2D-28P01615 120 aa4.45□□□□□ -1.7
CDC7-203ENST00000428239 Q5VSD8 79 aa4.45□□□□□ -1.7
CDC7-203ENST00000428239 TLX1NBP0CAT3 122 aa4.45□□□□□ -1.7
CDC7-203ENST00000428239 C9orf129Q5T035 196 aaKnown RBP4.45□□□□□ -1.7
CDC7-203ENST00000428239 FRAS1Q86XX4 4008 aa4.45□□□□□ -1.7
CDC7-203ENST00000428239 C22orf24Q9Y442 160 aa4.44□□□□□ -1.7
CDC7-203ENST00000428239 C1orf137Q5JT78 98 aa4.44□□□□□ -1.7
CDC7-203ENST00000428239 SERTAD4-AS1Q5TG53 156 aa4.44□□□□□ -1.7
CDC7-203ENST00000428239 VAMP3Q15836 100 aa4.44□□□□□ -1.7
CDC7-203ENST00000428239 HIST1H4GQ99525 98 aa4.44□□□□□ -1.7
CDC7-203ENST00000428239 Q6ZSA8 131 aa4.43□□□□□ -1.7
CDC7-203ENST00000428239 MRPL55Q7Z7F7 128 aaKnown RBP4.43□□□□□ -1.7
CDC7-203ENST00000428239 COPS9Q8WXC6 57 aa4.43□□□□□ -1.7
CDC7-203ENST00000428239 SIGMAR1Q99720 223 aa4.43□□□□□ -1.7
CDC7-203ENST00000428239 PLAC8Q9NZF1 115 aa4.43□□□□□ -1.7
CDC7-203ENST00000428239 J3QL48 77 aa4.43□□□□□ -1.7
CDC7-203ENST00000428239 PRR3P79522 188 aaKnown RBP4.43□□□□□ -1.7
CDC7-203ENST00000428239 DNAH6Q9C0G6 4158 aa4.43□□□□□ -1.7
CDC7-203ENST00000428239 EPPK1P58107 5090 aaKnown RBP4.43□□□□□ -1.7
CDC7-203ENST00000428239 CDIP1Q9H305 208 aa4.43□□□□□ -1.7
CDC7-203ENST00000428239 DNAH17Q9UFH2 4485 aa4.42□□□□□ -1.7
CDC7-203ENST00000428239 A6NDN8 102 aa4.42□□□□□ -1.7
CDC7-203ENST00000428239 UBE2AP49459 152 aa4.42□□□□□ -1.7
CDC7-203ENST00000428239 SLC25A34Q6PIV7 304 aa4.42□□□□□ -1.7
CDC7-203ENST00000428239 Q8N1X5 172 aa4.42□□□□□ -1.7
CDC7-203ENST00000428239 GHRHP01286 108 aa4.41□□□□□ -1.7
CDC7-203ENST00000428239 TP73-AS1Q9UF72 201 aa4.41□□□□□ -1.7
CDC7-203ENST00000428239 ADAMTSL4-AS1Q5T5F5 129 aa4.41□□□□□ -1.7
CDC7-203ENST00000428239 LINC00167Q96N53 147 aa4.41□□□□□ -1.7
CDC7-203ENST00000428239 B5MCH6 92 aa4.41□□□□□ -1.7
CDC7-203ENST00000428239 HINT1P49773 126 aaPredicted RBP4.41□□□□□ -1.7
CDC7-203ENST00000428239 M0R378 163 aa4.4□□□□□ -1.71
CDC7-203ENST00000428239 FAM19A1Q7Z5A9 133 aa4.4□□□□□ -1.71
CDC7-203ENST00000428239 LINC00308Q8TCZ7 52 aa4.4□□□□□ -1.71
CDC7-203ENST00000428239 PSORS1C2Q9UIG4 136 aa4.4□□□□□ -1.71
CDC7-203ENST00000428239 FLG2Q5D862 2391 aaPredicted RBP4.4□□□□□ -1.71
CDC7-203ENST00000428239 ETDCA0A1B0GVM5 59 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 COX8AP10176 69 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 Q6ZVH6 145 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 PLA2G2DQ9UNK4 145 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 PKHD1P08F94 4074 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 H7C2G1 150 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 INAFM2P0DMQ5 153 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 MUSTN1Q8IVN3 82 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 FAT2Q9NYQ8 4349 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 VPREB1P12018 145 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 HIGD2AQ9BW72 106 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 SPANXB1Q9NS25 103 aaPredicted RBP4.39□□□□□ -1.71
CDC7-203ENST00000428239 SPANXCQ9NY87 97 aa4.39□□□□□ -1.71
CDC7-203ENST00000428239 TIMM17BO60830 172 aa4.38□□□□□ -1.71
CDC7-203ENST00000428239 Q1RN00 199 aa4.38□□□□□ -1.71
CDC7-203ENST00000428239 TRBV10-3A0A0K0K1G6 114 aa4.38□□□□□ -1.71
CDC7-203ENST00000428239 HNRNPA3P51991 378 aaKnown RBP4.38□□□□□ -1.71
CDC7-203ENST00000428239 IFITM1P13164 125 aa4.38□□□□□ -1.71
CDC7-203ENST00000428239 KIAA1109Q2LD37 5005 aa4.37□□□□□ -1.71
CDC7-203ENST00000428239 H3BS24 57 aa4.37□□□□□ -1.71
CDC7-203ENST00000428239 REG3GQ6UW15 175 aa4.37□□□□□ -1.71
CDC7-203ENST00000428239 RAB37Q96AX2 223 aa4.37□□□□□ -1.71
CDC7-203ENST00000428239 RPL28P46779 137 aaKnown RBP4.37□□□□□ -1.71
CDC7-203ENST00000428239 PRLHP81277 87 aa4.37□□□□□ -1.71
CDC7-203ENST00000428239 SOSTDC1Q6X4U4 206 aa4.37□□□□□ -1.71
CDC7-203ENST00000428239 DYNC1H1Q14204 4646 aaKnown RBP4.37□□□□□ -1.71
CDC7-203ENST00000428239 DNAH11Q96DT5 4516 aa4.37□□□□□ -1.71
CDC7-203ENST00000428239 UQCR10Q9UDW1 63 aa4.36□□□□□ -1.71
CDC7-203ENST00000428239 V9GYY9 64 aa4.36□□□□□ -1.71
CDC7-203ENST00000428239 DNAH5Q8TE73 4624 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms