RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 COX7B2Q8TF08 81 aa4.88□□□□□ -1.63
VNN3-208ENST00000427187 TMEM126AQ9H061 195 aa4.88□□□□□ -1.63
VNN3-208ENST00000427187 MAP1LC3AQ9H492 121 aa4.88□□□□□ -1.63
VNN3-208ENST00000427187 SMCO4Q9NRQ5 59 aa4.88□□□□□ -1.63
VNN3-208ENST00000427187 NAT8Q9UHE5 227 aa4.88□□□□□ -1.63
VNN3-208ENST00000427187 M0R378 163 aa4.87□□□□□ -1.63
VNN3-208ENST00000427187 DDTP30046 118 aa4.87□□□□□ -1.63
VNN3-208ENST00000427187 FABP9Q0Z7S8 132 aa4.87□□□□□ -1.63
VNN3-208ENST00000427187 PEA15Q15121 130 aa4.87□□□□□ -1.63
VNN3-208ENST00000427187 LCE2CQ5TA81 110 aa4.87□□□□□ -1.63
VNN3-208ENST00000427187 Q8N8P6 123 aa4.87□□□□□ -1.63
VNN3-208ENST00000427187 HIGD2AQ9BW72 106 aa4.87□□□□□ -1.63
VNN3-208ENST00000427187 PRSS47A8MTI9 375 aa4.86□□□□□ -1.63
VNN3-208ENST00000427187 SPINK8P0C7L1 97 aa4.86□□□□□ -1.63
VNN3-208ENST00000427187 PFN2P35080 140 aa4.86□□□□□ -1.63
VNN3-208ENST00000427187 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
VNN3-208ENST00000427187 Q8NBF4 154 aa4.86□□□□□ -1.63
VNN3-208ENST00000427187 A6NJY4 79 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 VPREB1P12018 145 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 SEC11AP67812 179 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 ORMDL2Q53FV1 153 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 PDZD11Q5EBL8 140 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 SPAG11AQ6PDA7 123 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 Q8NDZ9 215 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 SPRR4Q96PI1 79 aa4.85□□□□□ -1.63
VNN3-208ENST00000427187 DLEU1O43261 78 aa4.84□□□□□ -1.63
VNN3-208ENST00000427187 MT1HP80294 61 aa4.84□□□□□ -1.63
VNN3-208ENST00000427187 LCE3BQ5TA77 95 aa4.84□□□□□ -1.63
VNN3-208ENST00000427187 KRTAP9-9Q9BYP9 154 aa4.84□□□□□ -1.63
VNN3-208ENST00000427187 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
VNN3-208ENST00000427187 LAMTOR2Q9Y2Q5 125 aa4.84□□□□□ -1.63
VNN3-208ENST00000427187 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
VNN3-208ENST00000427187 NPSP0C0P6 89 aa4.83□□□□□ -1.64
VNN3-208ENST00000427187 KRTAP19-2Q3LHN2 52 aa4.83□□□□□ -1.64
VNN3-208ENST00000427187 ATP5L2Q7Z4Y8 100 aa4.83□□□□□ -1.64
VNN3-208ENST00000427187 TIMM17AQ99595 171 aa4.83□□□□□ -1.64
VNN3-208ENST00000427187 TINCRA0A1B0GVN0 87 aa4.82□□□□□ -1.64
VNN3-208ENST00000427187 ATP5LO75964 103 aa4.82□□□□□ -1.64
VNN3-208ENST00000427187 C21orf62-AS1Q17RA5 79 aa4.82□□□□□ -1.64
VNN3-208ENST00000427187 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
VNN3-208ENST00000427187 HIST3H2BBQ8N257 126 aa4.82□□□□□ -1.64
VNN3-208ENST00000427187 TOMM6Q96B49 74 aa4.82□□□□□ -1.64
VNN3-208ENST00000427187 SND1-IT1Q9HBX3 110 aa4.82□□□□□ -1.64
VNN3-208ENST00000427187 IGLV5-45A0A087WSX0 123 aa4.81□□□□□ -1.64
VNN3-208ENST00000427187 JOSD1Q15040 202 aaPredicted RBP4.81□□□□□ -1.64
VNN3-208ENST00000427187 COA6Q5JTJ3 125 aaKnown RBP4.81□□□□□ -1.64
VNN3-208ENST00000427187 ZNF625Q96I27 306 aaPredicted RBP4.81□□□□□ -1.64
VNN3-208ENST00000427187 SCGB3A1Q96QR1 104 aa4.81□□□□□ -1.64
VNN3-208ENST00000427187 TSTD3H0UI37 97 aa4.8□□□□□ -1.64
VNN3-208ENST00000427187 RPL24P83731 157 aaKnown RBP4.8□□□□□ -1.64
VNN3-208ENST00000427187 ERASQ7Z444 233 aa4.8□□□□□ -1.64
VNN3-208ENST00000427187 SNHG12Q9BXW3 62 aa4.8□□□□□ -1.64
VNN3-208ENST00000427187 GNB1LQ9BYB4 327 aa4.8□□□□□ -1.64
VNN3-208ENST00000427187 NXT2Q9NPJ8 142 aaKnown RBP4.8□□□□□ -1.64
VNN3-208ENST00000427187 ERG28Q9UKR5 140 aa4.8□□□□□ -1.64
VNN3-208ENST00000427187 K7EMI3 77 aa4.79□□□□□ -1.64
VNN3-208ENST00000427187 SPINK1P00995 79 aa4.79□□□□□ -1.64
VNN3-208ENST00000427187 RHEBQ15382 184 aa4.79□□□□□ -1.64
VNN3-208ENST00000427187 KIAA1644Q3SXP7 199 aa4.79□□□□□ -1.64
VNN3-208ENST00000427187 CST9LQ9H4G1 147 aa4.79□□□□□ -1.64
VNN3-208ENST00000427187 IGLV9-49A0A0B4J1Y8 123 aa4.78□□□□□ -1.64
VNN3-208ENST00000427187 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
VNN3-208ENST00000427187 KRTAP10-6P60371 365 aaPredicted RBP4.78□□□□□ -1.64
VNN3-208ENST00000427187 MOBPQ13875 183 aa4.78□□□□□ -1.64
VNN3-208ENST00000427187 Q8N377 158 aa4.78□□□□□ -1.64
VNN3-208ENST00000427187 NDUFA12Q9UI09 145 aa4.78□□□□□ -1.64
VNN3-208ENST00000427187 ZNF706Q9Y5V0 76 aaPredicted RBP4.78□□□□□ -1.64
VNN3-208ENST00000427187 HSBP1L1C9JCN9 74 aa4.77□□□□□ -1.65
VNN3-208ENST00000427187 CFC1BP0CG36 223 aa4.77□□□□□ -1.65
VNN3-208ENST00000427187 S100A2P29034 98 aa4.77□□□□□ -1.65
VNN3-208ENST00000427187 SMCR5Q8TEV8 140 aa4.77□□□□□ -1.65
VNN3-208ENST00000427187 IGLV5-39A0A0G2JS06 123 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 A0A0U1RRA0 63 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 H3BRM9 83 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BKO60814 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BJP06899 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BOP23527 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 G0S2P27469 103 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BBP33778 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 SMCPP49901 116 aaPredicted RBP4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BDP58876 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BCP62807 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 PMVKQ15126 192 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST2H2BEQ16778 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 PCOTHQ58A44 107 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.76□□□□□ -1.65
VNN3-208ENST00000427187 GAGE2AQ6NT46 116 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BHQ93079 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BNQ99877 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BMQ99879 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 HIST1H2BLQ99880 126 aa4.76□□□□□ -1.65
VNN3-208ENST00000427187 MRPL18Q9H0U6 180 aaKnown RBP4.76□□□□□ -1.65
VNN3-208ENST00000427187 IGLV8-61A0A075B6I0 122 aa4.75□□□□□ -1.65
VNN3-208ENST00000427187 M0R143 59 aa4.75□□□□□ -1.65
VNN3-208ENST00000427187 NCR3O14931 201 aa4.75□□□□□ -1.65
VNN3-208ENST00000427187 SLC25A20O43772 301 aa4.74□□□□□ -1.65
VNN3-208ENST00000427187 IGLC3P0DOY3 106 aa4.74□□□□□ -1.65
VNN3-208ENST00000427187 ZNF22P17026 224 aaPredicted RBP4.74□□□□□ -1.65
VNN3-208ENST00000427187 NDUFA6P56556 154 aa4.74□□□□□ -1.65
VNN3-208ENST00000427187 COX17Q14061 63 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms