RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 LOC107984640A0A0U1RRK4 108 aa3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 PTTG1IPP53801 180 aa3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 RPL18AQ02543 176 aaKnown RBP3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 CIRBPQ14011 172 aaKnown RBP3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 SCXQ7RTU7 201 aa3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 CIRBP-AS1Q8TBR5 109 aa3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 SPACA4Q8TDM5 124 aa3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 TTTY13Q9BZ97 58 aa3.62□□□□□ -1.83
HERPUD2-204ENST00000426180 A0A1W2PNN7 141 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 FAM168BA1KXE4 195 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 C20orf202A1L168 122 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 E9PLD3 99 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 J3QQQ9 107 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 CDK2AP2O75956 126 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 SMR3BP02814 79 aaPredicted RBP3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 TLX1NBP0CAT3 122 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 CXCL5P42830 114 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 GAGE2EQ4V326 116 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 KRTAP7-1Q8IUC3 87 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 PLEKHB2Q96CS7 222 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 C12orf57Q99622 126 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 GAGE2DQ9UEU5 116 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 NDUFA12Q9UI09 145 aa3.61□□□□□ -1.83
HERPUD2-204ENST00000426180 A0A087WYN8 130 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 A0A0U1RRA0 63 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 NDUFC2-KCTD14E9PQ53 114 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 SCGB1D1O95968 90 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 SMIM6P0DI80 62 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 PFN2P35080 140 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 HERVK_113P61574 105 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 XAGE1AQ9HD64 81 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 PLAC8Q9NZF1 115 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 ERG28Q9UKR5 140 aa3.6□□□□□ -1.83
HERPUD2-204ENST00000426180 MYMXA0A1B0GTQ4 84 aa3.59□□□□□ -1.83
HERPUD2-204ENST00000426180 SMIM13P0DJ93 91 aa3.59□□□□□ -1.83
HERPUD2-204ENST00000426180 LGALS3P17931 250 aaKnown RBP3.59□□□□□ -1.83
HERPUD2-204ENST00000426180 Q8NDZ9 215 aa3.59□□□□□ -1.83
HERPUD2-204ENST00000426180 DPH3Q96FX2 82 aa3.59□□□□□ -1.83
HERPUD2-204ENST00000426180 TP73-AS1Q9UF72 201 aa3.59□□□□□ -1.83
HERPUD2-204ENST00000426180 A0A0J9YXY3 114 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 EPM2AB3EWF7 344 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 NMUP48645 174 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 LINC00158P58513 81 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 JOSD1Q15040 202 aaPredicted RBP3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 ADAMTSL4-AS1Q5T5F5 129 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 SERTAD4-AS1Q5TG53 156 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 FAM19A5Q7Z5A7 132 aaPredicted RBP3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 PCP2Q8IVA1 136 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 DAND5Q8N907 189 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 SND1-IT1Q9HBX3 110 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 LINC00474Q9P2X8 69 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 HSPG2P98160 4391 aa3.58□□□□□ -1.84
HERPUD2-204ENST00000426180 ABCA13Q86UQ4 5058 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 ZNF815PA8K554 130 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 HERV-K104P63124 156 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 PYY3Q5JQD4 70 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 MEIG1Q5JSS6 88 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 PHF5AQ7RTV0 110 aaKnown RBP3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 KRTAP11-1Q8IUC1 163 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 LITAFQ99732 161 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 PKIGQ9Y2B9 76 aa3.57□□□□□ -1.84
HERPUD2-204ENST00000426180 AKR1D1P51857 326 aa3.56□□□□□ -1.84
HERPUD2-204ENST00000426180 KRTAP10-4P60372 401 aaPredicted RBP3.56□□□□□ -1.84
HERPUD2-204ENST00000426180 COX17Q14061 63 aa3.56□□□□□ -1.84
HERPUD2-204ENST00000426180 SFTA2Q6UW10 78 aa3.56□□□□□ -1.84
HERPUD2-204ENST00000426180 SOSTDC1Q6X4U4 206 aa3.56□□□□□ -1.84
HERPUD2-204ENST00000426180 MIR7-3HGQ8N6C7 128 aa3.56□□□□□ -1.84
HERPUD2-204ENST00000426180 SRRM2Q9UQ35 2752 aaKnown RBP3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 M0QXV9 152 aa3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 VPREB1P12018 145 aa3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 NPC2P61916 151 aa3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 PRR3P79522 188 aaKnown RBP3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 SPATA45Q537H7 98 aa3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 PAM16Q9Y3D7 125 aa3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 C22orf24Q9Y442 160 aa3.55□□□□□ -1.84
HERPUD2-204ENST00000426180 VPS13BQ7Z7G8 4022 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 IGLV5-37A0A075B6J1 123 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 GAGE10A6NGK3 116 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 KRTAP29-1A8MX34 341 aaPredicted RBP3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 TIMM17BO60830 172 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 Q5VSD8 79 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 C7orf33Q8WU49 177 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 C14orf144Q96I85 54 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 VAMP8Q9BV40 100 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 FAT1Q14517 4588 aa3.54□□□□□ -1.84
HERPUD2-204ENST00000426180 LOC107984156A0A0G2JMH3 177 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 RPL37AP8A6NKH3 93 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 LINC00587B1AMM8 73 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 NCR3O14931 201 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 COX8AP10176 69 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 HNRNPA3P51991 378 aaKnown RBP3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 RPL37AP61513 92 aaKnown RBP3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 SCGB1D4Q6XE38 83 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 ARL17AQ8IVW1 177 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 BOD1L2Q8IYS8 172 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 LINC00308Q8TCZ7 52 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 LINC00167Q96N53 147 aa3.53□□□□□ -1.84
HERPUD2-204ENST00000426180 PCLOQ9Y6V0 5065 aa3.52□□□□□ -1.85
HERPUD2-204ENST00000426180 MRPL55Q7Z7F7 128 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms