RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 AKR1D1P51857 326 aa13.46□□□□□ -0.25
SEC22C-207ENST00000423701 PLA2G2DQ9UNK4 145 aa13.46□□□□□ -0.25
SEC22C-207ENST00000423701 LINC00587B1AMM8 73 aa13.45□□□□□ -0.26
SEC22C-207ENST00000423701 C22orf24Q9Y442 160 aa13.45□□□□□ -0.26
SEC22C-207ENST00000423701 KRTAP11-1Q8IUC1 163 aa13.43□□□□□ -0.26
SEC22C-207ENST00000423701 HNRNPA3P51991 378 aaKnown RBP13.42□□□□□ -0.26
SEC22C-207ENST00000423701 MIR7-3HGQ8N6C7 128 aa13.42□□□□□ -0.26
SEC22C-207ENST00000423701 TP73-AS1Q9UF72 201 aa13.42□□□□□ -0.26
SEC22C-207ENST00000423701 IGLV5-37A0A075B6J1 123 aa13.42□□□□□ -0.26
SEC22C-207ENST00000423701 ANKRD39Q53RE8 183 aa13.42□□□□□ -0.26
SEC22C-207ENST00000423701 PSORS1C2Q9UIG4 136 aa13.42□□□□□ -0.26
SEC22C-207ENST00000423701 UBE2BP63146 152 aa13.41□□□□□ -0.26
SEC22C-207ENST00000423701 MRPL55Q7Z7F7 128 aaKnown RBP13.41□□□□□ -0.26
SEC22C-207ENST00000423701 A0A0J9YXY3 114 aa13.4□□□□□ -0.26
SEC22C-207ENST00000423701 Q8NDZ9 215 aa13.4□□□□□ -0.26
SEC22C-207ENST00000423701 TTTY13Q9BZ97 58 aa13.4□□□□□ -0.26
SEC22C-207ENST00000423701 VPREB1P12018 145 aa13.39□□□□□ -0.27
SEC22C-207ENST00000423701 LBHQ53QV2 105 aaPredicted RBP13.39□□□□□ -0.27
SEC22C-207ENST00000423701 NKAPP1Q8N9T2 125 aa13.39□□□□□ -0.27
SEC22C-207ENST00000423701 ZNF815PA8K554 130 aa13.38□□□□□ -0.27
SEC22C-207ENST00000423701 DAND5Q8N907 189 aa13.38□□□□□ -0.27
SEC22C-207ENST00000423701 TMA7Q9Y2S6 64 aaKnown RBP13.38□□□□□ -0.27
SEC22C-207ENST00000423701 RPL24P83731 157 aaKnown RBP13.36□□□□□ -0.27
SEC22C-207ENST00000423701 C1orf137Q5JT78 98 aa13.36□□□□□ -0.27
SEC22C-207ENST00000423701 LINC00167Q96N53 147 aa13.36□□□□□ -0.27
SEC22C-207ENST00000423701 GAGE10A6NGK3 116 aa13.35□□□□□ -0.27
SEC22C-207ENST00000423701 SCGB1D1O95968 90 aa13.35□□□□□ -0.27
SEC22C-207ENST00000423701 BOD1L2Q8IYS8 172 aa13.34□□□□□ -0.27
SEC22C-207ENST00000423701 ADAMTSL4-AS1Q5T5F5 129 aa13.33□□□□□ -0.28
SEC22C-207ENST00000423701 RPL37AP8A6NKH3 93 aa13.32□□□□□ -0.28
SEC22C-207ENST00000423701 LITAFQ99732 161 aa13.32□□□□□ -0.28
SEC22C-207ENST00000423701 HSBP1L1C9JCN9 74 aa13.31□□□□□ -0.28
SEC22C-207ENST00000423701 PCP2Q8IVA1 136 aa13.31□□□□□ -0.28
SEC22C-207ENST00000423701 LOC107984156A0A0G2JMH3 177 aa13.3□□□□□ -0.28
SEC22C-207ENST00000423701 TIMM17BO60830 172 aa13.3□□□□□ -0.28
SEC22C-207ENST00000423701 ARL17AQ8IVW1 177 aa13.3□□□□□ -0.28
SEC22C-207ENST00000423701 MYCBP2O75592 4640 aa13.3□□□□□ -0.28
SEC22C-207ENST00000423701 FLG2Q5D862 2391 aaPredicted RBP13.3□□□□□ -0.28
SEC22C-207ENST00000423701 PKHD1L1Q86WI1 4243 aa13.29□□□□□ -0.28
SEC22C-207ENST00000423701 MIEN1Q9BRT3 115 aa13.29□□□□□ -0.28
SEC22C-207ENST00000423701 IGKV2-28A0A075B6P5 120 aa13.28□□□□□ -0.28
SEC22C-207ENST00000423701 IGKV2D-28P01615 120 aa13.28□□□□□ -0.28
SEC22C-207ENST00000423701 IGLV7-43P04211 117 aa13.28□□□□□ -0.28
SEC22C-207ENST00000423701 SRSF9Q13242 221 aaKnown RBP eCLIP13.28□□□□□ -0.28
SEC22C-207ENST00000423701 SOSTDC1Q6X4U4 206 aa13.28□□□□□ -0.28
SEC22C-207ENST00000423701 NPC2P61916 151 aa13.27□□□□□ -0.29
SEC22C-207ENST00000423701 SCGB1D4Q6XE38 83 aa13.27□□□□□ -0.29
SEC22C-207ENST00000423701 IGLV1-50A0A075B6I6 118 aa13.26□□□□□ -0.29
SEC22C-207ENST00000423701 M0R378 163 aa13.26□□□□□ -0.29
SEC22C-207ENST00000423701 NCR3O14931 201 aa13.26□□□□□ -0.29
SEC22C-207ENST00000423701 EIF4EBP3O60516 100 aaPredicted RBP13.26□□□□□ -0.29
SEC22C-207ENST00000423701 SPINK6Q6UWN8 80 aa13.26□□□□□ -0.29
SEC22C-207ENST00000423701 JOSD1Q15040 202 aaPredicted RBP13.23□□□□□ -0.29
SEC22C-207ENST00000423701 TMEM238C9JI98 176 aa13.23□□□□□ -0.29
SEC22C-207ENST00000423701 LINC00308Q8TCZ7 52 aa13.23□□□□□ -0.29
SEC22C-207ENST00000423701 BCE1O60756 84 aa13.22□□□□□ -0.29
SEC22C-207ENST00000423701 NDUFC2O95298 119 aa13.21□□□□□ -0.3
SEC22C-207ENST00000423701 SPANXDQ9BXN6 97 aa13.2□□□□□ -0.3
SEC22C-207ENST00000423701 SPANXB1Q9NS25 103 aaPredicted RBP13.2□□□□□ -0.3
SEC22C-207ENST00000423701 SPANXCQ9NY87 97 aa13.2□□□□□ -0.3
SEC22C-207ENST00000423701 TMEM126AQ9H061 195 aa13.19□□□□□ -0.3
SEC22C-207ENST00000423701 TRBV10-2A0A0K0K1G8 114 aa13.18□□□□□ -0.3
SEC22C-207ENST00000423701 LRP1Q07954 4544 aaKnown RBP13.18□□□□□ -0.3
SEC22C-207ENST00000423701 KRTAP29-1A8MX34 341 aaPredicted RBP13.17□□□□□ -0.3
SEC22C-207ENST00000423701 REG3GQ6UW15 175 aa13.17□□□□□ -0.3
SEC22C-207ENST00000423701 TRBV10-3A0A0K0K1G6 114 aa13.16□□□□□ -0.3
SEC22C-207ENST00000423701 ZNF861PO60384 105 aa13.16□□□□□ -0.3
SEC22C-207ENST00000423701 DIRC1Q969H9 104 aa13.16□□□□□ -0.3
SEC22C-207ENST00000423701 PAM16Q9Y3D7 125 aa13.16□□□□□ -0.3
SEC22C-207ENST00000423701 OXTP01178 125 aa13.16□□□□□ -0.3
SEC22C-207ENST00000423701 PYY3Q5JQD4 70 aa13.15□□□□□ -0.3
SEC22C-207ENST00000423701 VAMP8Q9BV40 100 aa13.15□□□□□ -0.3
SEC22C-207ENST00000423701 H0Y9J4 135 aa13.14□□□□□ -0.31
SEC22C-207ENST00000423701 COX8AP10176 69 aa13.14□□□□□ -0.31
SEC22C-207ENST00000423701 SPATA45Q537H7 98 aa13.14□□□□□ -0.31
SEC22C-207ENST00000423701 Q6ZVH6 145 aa13.14□□□□□ -0.31
SEC22C-207ENST00000423701 FAT3Q8TDW7 4589 aa13.14□□□□□ -0.31
SEC22C-207ENST00000423701 PRYO14603 147 aa13.13□□□□□ -0.31
SEC22C-207ENST00000423701 DDTP30046 118 aa13.13□□□□□ -0.31
SEC22C-207ENST00000423701 RPL28P46779 137 aaKnown RBP13.13□□□□□ -0.31
SEC22C-207ENST00000423701 KRTAP13-1Q8IUC0 172 aa13.13□□□□□ -0.31
SEC22C-207ENST00000423701 KCNQ1DNQ9H478 68 aa13.13□□□□□ -0.31
SEC22C-207ENST00000423701 IFITM1P13164 125 aa13.12□□□□□ -0.31
SEC22C-207ENST00000423701 UBE2AP49459 152 aa13.12□□□□□ -0.31
SEC22C-207ENST00000423701 FAM19A1Q7Z5A9 133 aa13.11□□□□□ -0.31
SEC22C-207ENST00000423701 COPS9Q8WXC6 57 aa13.11□□□□□ -0.31
SEC22C-207ENST00000423701 PPDPFQ9H3Y8 114 aa13.11□□□□□ -0.31
SEC22C-207ENST00000423701 IGLV6-57P01721 117 aa13.1□□□□□ -0.31
SEC22C-207ENST00000423701 PRLHP81277 87 aa13.1□□□□□ -0.31
SEC22C-207ENST00000423701 S100A7L2Q5SY68 101 aa13.1□□□□□ -0.31
SEC22C-207ENST00000423701 J3QL48 77 aa13.1□□□□□ -0.31
SEC22C-207ENST00000423701 DLEU1O43261 78 aa13.09□□□□□ -0.31
SEC22C-207ENST00000423701 SPRR1AP35321 89 aa13.09□□□□□ -0.31
SEC22C-207ENST00000423701 MUSTN1Q8IVN3 82 aa13.09□□□□□ -0.31
SEC22C-207ENST00000423701 C14orf144Q96I85 54 aa13.09□□□□□ -0.31
SEC22C-207ENST00000423701 S100A12P80511 92 aa13.08□□□□□ -0.32
SEC22C-207ENST00000423701 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
SEC22C-207ENST00000423701 LINC00337Q8N6G1 96 aa13.06□□□□□ -0.32
SEC22C-207ENST00000423701 KRTAP4-16G5E9R7 235 aaPredicted RBP13.05□□□□□ -0.32
SEC22C-207ENST00000423701 TRAV23DV6A0A075B6W5 121 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms