RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 SMIM13P0DJ93 91 aa6.13□□□□□ -1.43
HERC3-204ENST00000422770 PFN2P35080 140 aa6.13□□□□□ -1.43
HERC3-204ENST00000422770 PTTG1IPP53801 180 aa6.13□□□□□ -1.43
HERC3-204ENST00000422770 GAGE2EQ4V326 116 aa6.13□□□□□ -1.43
HERC3-204ENST00000422770 C9orf116Q5BN46 136 aaPredicted RBP6.13□□□□□ -1.43
HERC3-204ENST00000422770 GAGE2DQ9UEU5 116 aa6.13□□□□□ -1.43
HERC3-204ENST00000422770 TRBV30A0A0K0K1B3 111 aa6.12□□□□□ -1.43
HERC3-204ENST00000422770 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
HERC3-204ENST00000422770 DLEU1O43261 78 aa6.12□□□□□ -1.43
HERC3-204ENST00000422770 LINC00158P58513 81 aa6.12□□□□□ -1.43
HERC3-204ENST00000422770 C2orf91Q6ZV80 131 aa6.12□□□□□ -1.43
HERC3-204ENST00000422770 DAND5Q8N907 189 aa6.12□□□□□ -1.43
HERC3-204ENST00000422770 PLAC8Q9NZF1 115 aa6.12□□□□□ -1.43
HERC3-204ENST00000422770 NPC2P61916 151 aa6.11□□□□□ -1.43
HERC3-204ENST00000422770 RNF151Q2KHN1 245 aa6.11□□□□□ -1.43
HERC3-204ENST00000422770 MIEN1Q9BRT3 115 aa6.11□□□□□ -1.43
HERC3-204ENST00000422770 MIR7-3HGQ8N6C7 128 aa6.1□□□□□ -1.43
HERC3-204ENST00000422770 PCP4L1A6NKN8 68 aa6.09□□□□□ -1.43
HERC3-204ENST00000422770 TIMM17BO60830 172 aa6.09□□□□□ -1.43
HERC3-204ENST00000422770 FAM19A5Q7Z5A7 132 aaPredicted RBP6.09□□□□□ -1.43
HERC3-204ENST00000422770 HIST1H4GQ99525 98 aa6.09□□□□□ -1.43
HERC3-204ENST00000422770 LITAFQ99732 161 aa6.09□□□□□ -1.43
HERC3-204ENST00000422770 HERC1Q15751 4861 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 LINC00587B1AMM8 73 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 NDUFC2-KCTD14E9PQ53 114 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 J3QL48 77 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 SRSF9Q13242 221 aaKnown RBP eCLIP6.08□□□□□ -1.44
HERC3-204ENST00000422770 Q6ZRP5 223 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 SPANXDQ9BXN6 97 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 SPANXCQ9NY87 97 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 HIGD1BQ9P298 99 aa6.08□□□□□ -1.44
HERC3-204ENST00000422770 DMBT1Q9UGM3 2413 aaPredicted RBP6.07□□□□□ -1.44
HERC3-204ENST00000422770 A0A1W2PNN7 141 aa6.07□□□□□ -1.44
HERC3-204ENST00000422770 FAM168BA1KXE4 195 aa6.07□□□□□ -1.44
HERC3-204ENST00000422770 DDTP30046 118 aa6.07□□□□□ -1.44
HERC3-204ENST00000422770 HSD52Q0P140 79 aa6.07□□□□□ -1.44
HERC3-204ENST00000422770 XAGE1AQ9HD64 81 aa6.07□□□□□ -1.44
HERC3-204ENST00000422770 SPANXB1Q9NS25 103 aaPredicted RBP6.07□□□□□ -1.44
HERC3-204ENST00000422770 FAT1Q14517 4588 aa6.07□□□□□ -1.44
HERC3-204ENST00000422770 DNAH8Q96JB1 4490 aa6.07□□□□□ -1.44
HERC3-204ENST00000422770 TLX1NBP0CAT3 122 aa6.06□□□□□ -1.44
HERC3-204ENST00000422770 COX17Q14061 63 aa6.06□□□□□ -1.44
HERC3-204ENST00000422770 ADAMTSL4-AS1Q5T5F5 129 aa6.06□□□□□ -1.44
HERC3-204ENST00000422770 SND1-IT1Q9HBX3 110 aa6.06□□□□□ -1.44
HERC3-204ENST00000422770 KRTAP10-4P60372 401 aaPredicted RBP6.05□□□□□ -1.44
HERC3-204ENST00000422770 CTAG1AP78358 180 aa6.05□□□□□ -1.44
HERC3-204ENST00000422770 PRR3P79522 188 aaKnown RBP6.05□□□□□ -1.44
HERC3-204ENST00000422770 SOSTDC1Q6X4U4 206 aa6.05□□□□□ -1.44
HERC3-204ENST00000422770 PHF5AQ7RTV0 110 aaKnown RBP6.05□□□□□ -1.44
HERC3-204ENST00000422770 LINC00308Q8TCZ7 52 aa6.05□□□□□ -1.44
HERC3-204ENST00000422770 M0QXV9 152 aa6.04□□□□□ -1.44
HERC3-204ENST00000422770 HINT1P49773 126 aaPredicted RBP6.04□□□□□ -1.44
HERC3-204ENST00000422770 UBE2BP63146 152 aa6.04□□□□□ -1.44
HERC3-204ENST00000422770 BATFQ16520 125 aa6.04□□□□□ -1.44
HERC3-204ENST00000422770 FLG2Q5D862 2391 aaPredicted RBP6.03□□□□□ -1.44
HERC3-204ENST00000422770 M0R143 59 aa6.03□□□□□ -1.44
HERC3-204ENST00000422770 NCR3O14931 201 aa6.03□□□□□ -1.44
HERC3-204ENST00000422770 EIF4EBP3O60516 100 aaPredicted RBP6.03□□□□□ -1.44
HERC3-204ENST00000422770 IFITM1P13164 125 aa6.03□□□□□ -1.44
HERC3-204ENST00000422770 FXYD2P54710 66 aa6.03□□□□□ -1.44
HERC3-204ENST00000422770 C9orf129Q5T035 196 aaKnown RBP6.03□□□□□ -1.44
HERC3-204ENST00000422770 Q6ZVH6 145 aa6.03□□□□□ -1.44
HERC3-204ENST00000422770 MUSTN1Q8IVN3 82 aa6.03□□□□□ -1.44
HERC3-204ENST00000422770 COPS9Q8WXC6 57 aa6.03□□□□□ -1.44
HERC3-204ENST00000422770 TAL2Q16559 108 aa6.02□□□□□ -1.45
HERC3-204ENST00000422770 CEND1Q8N111 149 aa6.02□□□□□ -1.45
HERC3-204ENST00000422770 SRRM2Q9UQ35 2752 aaKnown RBP6.01□□□□□ -1.45
HERC3-204ENST00000422770 MYCBP2O75592 4640 aa6.01□□□□□ -1.45
HERC3-204ENST00000422770 TMEM238LA0A1B0GVL6 79 aa6.01□□□□□ -1.45
HERC3-204ENST00000422770 A4D1N5 150 aa6.01□□□□□ -1.45
HERC3-204ENST00000422770 A6NJY4 79 aa6.01□□□□□ -1.45
HERC3-204ENST00000422770 RPL24P83731 157 aaKnown RBP6.01□□□□□ -1.45
HERC3-204ENST00000422770 C1orf137Q5JT78 98 aa6.01□□□□□ -1.45
HERC3-204ENST00000422770 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
HERC3-204ENST00000422770 Q8NDZ9 215 aa6.01□□□□□ -1.45
HERC3-204ENST00000422770 BVES-AS1Q5T3Y7 98 aa6□□□□□ -1.45
HERC3-204ENST00000422770 SERTAD4-AS1Q5TG53 156 aa6□□□□□ -1.45
HERC3-204ENST00000422770 NHP2Q9NX24 153 aaKnown RBP6□□□□□ -1.45
HERC3-204ENST00000422770 PSORS1C2Q9UIG4 136 aa6□□□□□ -1.45
HERC3-204ENST00000422770 VPS13BQ7Z7G8 4022 aa6□□□□□ -1.45
HERC3-204ENST00000422770 K7ERJ3 54 aa5.99□□□□□ -1.45
HERC3-204ENST00000422770 VPREB1P12018 145 aa5.99□□□□□ -1.45
HERC3-204ENST00000422770 KRTAP29-1A8MX34 341 aaPredicted RBP5.98□□□□□ -1.45
HERC3-204ENST00000422770 OXTP01178 125 aa5.98□□□□□ -1.45
HERC3-204ENST00000422770 RPL13AP40429 203 aaKnown RBP5.98□□□□□ -1.45
HERC3-204ENST00000422770 KRTAP7-1Q8IUC3 87 aa5.98□□□□□ -1.45
HERC3-204ENST00000422770 RAB37Q96AX2 223 aa5.98□□□□□ -1.45
HERC3-204ENST00000422770 C22orf24Q9Y442 160 aa5.98□□□□□ -1.45
HERC3-204ENST00000422770 GAGE10A6NGK3 116 aa5.97□□□□□ -1.45
HERC3-204ENST00000422770 LBHQ53QV2 105 aaPredicted RBP5.97□□□□□ -1.45
HERC3-204ENST00000422770 OR13C6PQ8NH95 151 aa5.97□□□□□ -1.45
HERC3-204ENST00000422770 PPDPFQ9H3Y8 114 aa5.97□□□□□ -1.45
HERC3-204ENST00000422770 A0A0B4J2C4 111 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 LOC107984156A0A0G2JMH3 177 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 A6NDN8 102 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 RPL37AP8A6NKH3 93 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 H7C2G1 150 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 NDUFC2O95298 119 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 Q1RN00 199 aa5.96□□□□□ -1.46
HERC3-204ENST00000422770 REG3GQ6UW15 175 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms