RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 C3orf22Q8N5N4 141 aa5.79□□□□□ -1.48
TNFAIP3-202ENST00000420009 IGKV2-28A0A075B6P5 120 aa5.78□□□□□ -1.48
TNFAIP3-202ENST00000420009 SMIM1B2RUZ4 78 aa5.78□□□□□ -1.48
TNFAIP3-202ENST00000420009 IGKV2D-28P01615 120 aa5.78□□□□□ -1.48
TNFAIP3-202ENST00000420009 SEC11AP67812 179 aa5.78□□□□□ -1.48
TNFAIP3-202ENST00000420009 PRLHP81277 87 aa5.78□□□□□ -1.48
TNFAIP3-202ENST00000420009 NKAPP1Q8N9T2 125 aa5.78□□□□□ -1.48
TNFAIP3-202ENST00000420009 LAMTOR2Q9Y2Q5 125 aa5.78□□□□□ -1.48
TNFAIP3-202ENST00000420009 LOC389332A0A1B0GUA5 103 aa5.77□□□□□ -1.49
TNFAIP3-202ENST00000420009 SPAG11AQ6PDA7 123 aa5.77□□□□□ -1.49
TNFAIP3-202ENST00000420009 ATP5L2Q7Z4Y8 100 aa5.77□□□□□ -1.49
TNFAIP3-202ENST00000420009 MAP1LC3AQ9H492 121 aa5.77□□□□□ -1.49
TNFAIP3-202ENST00000420009 LINC00337Q8N6G1 96 aa5.76□□□□□ -1.49
TNFAIP3-202ENST00000420009 Q8N8P6 123 aa5.76□□□□□ -1.49
TNFAIP3-202ENST00000420009 PLEKHB2Q96CS7 222 aa5.76□□□□□ -1.49
TNFAIP3-202ENST00000420009 TMEM126AQ9H061 195 aa5.76□□□□□ -1.49
TNFAIP3-202ENST00000420009 GEMIN7Q9H840 131 aaKnown RBP5.76□□□□□ -1.49
TNFAIP3-202ENST00000420009 K7EMI3 77 aa5.75□□□□□ -1.49
TNFAIP3-202ENST00000420009 SEC61BP60468 96 aaKnown RBP5.75□□□□□ -1.49
TNFAIP3-202ENST00000420009 ORMDL2Q53FV1 153 aa5.75□□□□□ -1.49
TNFAIP3-202ENST00000420009 PDZD11Q5EBL8 140 aa5.75□□□□□ -1.49
TNFAIP3-202ENST00000420009 PAPPA-AS1Q5QFB9 102 aa5.75□□□□□ -1.49
TNFAIP3-202ENST00000420009 FAM19A1Q7Z5A9 133 aa5.75□□□□□ -1.49
TNFAIP3-202ENST00000420009 COX7B2Q8TF08 81 aa5.75□□□□□ -1.49
TNFAIP3-202ENST00000420009 TRAV9-1A0A075B6T8 112 aa5.74□□□□□ -1.49
TNFAIP3-202ENST00000420009 IGLV5-45A0A087WSX0 123 aa5.74□□□□□ -1.49
TNFAIP3-202ENST00000420009 TMEM238C9JI98 176 aa5.74□□□□□ -1.49
TNFAIP3-202ENST00000420009 M0R378 163 aa5.74□□□□□ -1.49
TNFAIP3-202ENST00000420009 S100PP25815 95 aa5.74□□□□□ -1.49
TNFAIP3-202ENST00000420009 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
TNFAIP3-202ENST00000420009 VPREB1P12018 145 aa5.73□□□□□ -1.49
TNFAIP3-202ENST00000420009 RAB5BP61020 215 aa5.72□□□□□ -1.49
TNFAIP3-202ENST00000420009 SPRR4Q96PI1 79 aa5.72□□□□□ -1.49
TNFAIP3-202ENST00000420009 GNB1LQ9BYB4 327 aa5.72□□□□□ -1.49
TNFAIP3-202ENST00000420009 TINCRA0A1B0GVN0 87 aa5.71□□□□□ -1.5
TNFAIP3-202ENST00000420009 TOMM6Q96B49 74 aa5.71□□□□□ -1.5
TNFAIP3-202ENST00000420009 NXT2Q9NPJ8 142 aaKnown RBP5.71□□□□□ -1.5
TNFAIP3-202ENST00000420009 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
TNFAIP3-202ENST00000420009 KRTAP19-2Q3LHN2 52 aa5.7□□□□□ -1.5
TNFAIP3-202ENST00000420009 Q8NBF4 154 aa5.7□□□□□ -1.5
TNFAIP3-202ENST00000420009 Q8NDZ9 215 aa5.7□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIGD2AQ9BW72 106 aa5.7□□□□□ -1.5
TNFAIP3-202ENST00000420009 SND1-IT1Q9HBX3 110 aa5.7□□□□□ -1.5
TNFAIP3-202ENST00000420009 ATP5LO75964 103 aa5.69□□□□□ -1.5
TNFAIP3-202ENST00000420009 TRGC2P03986 189 aa5.69□□□□□ -1.5
TNFAIP3-202ENST00000420009 SPINK8P0C7L1 97 aa5.69□□□□□ -1.5
TNFAIP3-202ENST00000420009 G0S2P27469 103 aa5.69□□□□□ -1.5
TNFAIP3-202ENST00000420009 ERASQ7Z444 233 aa5.69□□□□□ -1.5
TNFAIP3-202ENST00000420009 DAND5Q8N907 189 aa5.69□□□□□ -1.5
TNFAIP3-202ENST00000420009 SPINK1P00995 79 aa5.68□□□□□ -1.5
TNFAIP3-202ENST00000420009 PFN2P35080 140 aa5.68□□□□□ -1.5
TNFAIP3-202ENST00000420009 MT1HP80294 61 aa5.68□□□□□ -1.5
TNFAIP3-202ENST00000420009 RPL24P83731 157 aaKnown RBP5.67□□□□□ -1.5
TNFAIP3-202ENST00000420009 FABP9Q0Z7S8 132 aa5.67□□□□□ -1.5
TNFAIP3-202ENST00000420009 COX19Q49B96 90 aa5.67□□□□□ -1.5
TNFAIP3-202ENST00000420009 SCGB3A1Q96QR1 104 aa5.67□□□□□ -1.5
TNFAIP3-202ENST00000420009 TRAPPC1Q9Y5R8 145 aa5.67□□□□□ -1.5
TNFAIP3-202ENST00000420009 ZNF706Q9Y5V0 76 aaPredicted RBP5.67□□□□□ -1.5
TNFAIP3-202ENST00000420009 IGLV5-39A0A0G2JS06 123 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BKO60814 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BJP06899 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BOP23527 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BBP33778 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BDP58876 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BCP62807 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST2H2BEQ16778 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BHQ93079 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BNQ99877 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 HIST1H2BMQ99879 126 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 CST9LQ9H4G1 147 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 ERG28Q9UKR5 140 aa5.66□□□□□ -1.5
TNFAIP3-202ENST00000420009 CFC1BP0CG36 223 aa5.65□□□□□ -1.5
TNFAIP3-202ENST00000420009 RPS29P62273 56 aaKnown RBP5.65□□□□□ -1.5
TNFAIP3-202ENST00000420009 Q8N377 158 aa5.65□□□□□ -1.5
TNFAIP3-202ENST00000420009 NDUFA12Q9UI09 145 aa5.65□□□□□ -1.5
TNFAIP3-202ENST00000420009 H3BRM9 83 aa5.64□□□□□ -1.51
TNFAIP3-202ENST00000420009 COX17Q14061 63 aa5.64□□□□□ -1.51
TNFAIP3-202ENST00000420009 KIAA1644Q3SXP7 199 aa5.64□□□□□ -1.51
TNFAIP3-202ENST00000420009 FAM19A2Q8N3H0 131 aa5.64□□□□□ -1.51
TNFAIP3-202ENST00000420009 LINC01549A6NIU2 74 aa5.63□□□□□ -1.51
TNFAIP3-202ENST00000420009 PMVKQ15126 192 aa5.63□□□□□ -1.51
TNFAIP3-202ENST00000420009 LINC00483Q53H64 154 aa5.63□□□□□ -1.51
TNFAIP3-202ENST00000420009 LOC105371267A0A1B0GV96 52 aa5.62□□□□□ -1.51
TNFAIP3-202ENST00000420009 LINC01546A6NGU7 62 aa5.62□□□□□ -1.51
TNFAIP3-202ENST00000420009 IGLC3P0DOY3 106 aa5.62□□□□□ -1.51
TNFAIP3-202ENST00000420009 SPRR1AP35321 89 aa5.62□□□□□ -1.51
TNFAIP3-202ENST00000420009 C5orf52A6NGY3 159 aa5.61□□□□□ -1.51
TNFAIP3-202ENST00000420009 NDUFA6P56556 154 aa5.61□□□□□ -1.51
TNFAIP3-202ENST00000420009 KRTAP10-6P60371 365 aaPredicted RBP5.61□□□□□ -1.51
TNFAIP3-202ENST00000420009 COA6Q5JTJ3 125 aaKnown RBP5.61□□□□□ -1.51
TNFAIP3-202ENST00000420009 KRTAP4-16G5E9R7 235 aaPredicted RBP5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 PRYO14603 147 aa5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 SLC25A20O43772 301 aa5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 ZNF22P17026 224 aaPredicted RBP5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 SNRPEP62304 92 aaKnown RBP5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 MOBPQ13875 183 aa5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 C18orf32Q8TCD1 76 aa5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 SMCR5Q8TEV8 140 aa5.6□□□□□ -1.51
TNFAIP3-202ENST00000420009 ZNF625Q96I27 306 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 397 ms