RNA–Protein interactions for RNA: ENST00000417271.1

SLC8A1-210, Transcript of solute carrier family 8 member A1, humanhuman

TSL 1 (best)

Gene SLC8A1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC8A1-210ENST00000417271 PET117Q6UWS5 81 aa3.47□□□□□ -1.85
SLC8A1-210ENST00000417271 ATOH7Q8N100 152 aa3.47□□□□□ -1.85
SLC8A1-210ENST00000417271 HIST1H2BLQ99880 126 aa3.47□□□□□ -1.85
SLC8A1-210ENST00000417271 ERG28Q9UKR5 140 aa3.47□□□□□ -1.85
SLC8A1-210ENST00000417271 J3QQQ9 107 aa3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 M0QXV9 152 aa3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 LEPROTO15243 131 aa3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 SNRPEP62304 92 aaKnown RBP3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 PRR3P79522 188 aaKnown RBP3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 Q8NDZ9 215 aa3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 C7orf33Q8WU49 177 aa3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 TTTY13Q9BZ97 58 aa3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 NDUFA12Q9UI09 145 aa3.46□□□□□ -1.86
SLC8A1-210ENST00000417271 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 DNAH8Q96JB1 4490 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 IGKV2D-26A0A0A0MRZ7 120 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 GAGE10A6NGK3 116 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 S100A6P06703 90 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 SMIM13P0DJ93 91 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 S100A2P29034 98 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 LINC00158P58513 81 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 HERVK_113P61574 105 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 MEIG1Q5JSS6 88 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 DAND5Q8N907 189 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 PLEKHB2Q96CS7 222 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 SND1-IT1Q9HBX3 110 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 ABCA13Q86UQ4 5058 aa3.45□□□□□ -1.86
SLC8A1-210ENST00000417271 MYMXA0A1B0GTQ4 84 aa3.44□□□□□ -1.86
SLC8A1-210ENST00000417271 C5orf52A6NGY3 159 aa3.44□□□□□ -1.86
SLC8A1-210ENST00000417271 E9PLD3 99 aa3.44□□□□□ -1.86
SLC8A1-210ENST00000417271 LGALS3P17931 250 aaKnown RBP3.44□□□□□ -1.86
SLC8A1-210ENST00000417271 PSORS1C2Q9UIG4 136 aa3.44□□□□□ -1.86
SLC8A1-210ENST00000417271 C22orf24Q9Y442 160 aa3.44□□□□□ -1.86
SLC8A1-210ENST00000417271 C20orf202A1L168 122 aa3.43□□□□□ -1.86
SLC8A1-210ENST00000417271 RPL37AP8A6NKH3 93 aa3.43□□□□□ -1.86
SLC8A1-210ENST00000417271 PCP4P48539 62 aa3.43□□□□□ -1.86
SLC8A1-210ENST00000417271 UBE2BP63146 152 aa3.43□□□□□ -1.86
SLC8A1-210ENST00000417271 C1orf137Q5JT78 98 aa3.43□□□□□ -1.86
SLC8A1-210ENST00000417271 SFTA2Q6UW10 78 aa3.43□□□□□ -1.86
SLC8A1-210ENST00000417271 MIR7-3HGQ8N6C7 128 aa3.43□□□□□ -1.86
SLC8A1-210ENST00000417271 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 A0A0J9YXY3 114 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 NCR3O14931 201 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 VPREB1P12018 145 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 NMUP48645 174 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 NPC2P61916 151 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 HERV-K104P63124 156 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 COX17Q14061 63 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 ADAMTSL4-AS1Q5T5F5 129 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 MRPL55Q7Z7F7 128 aaKnown RBP3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 NKAPP1Q8N9T2 125 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 LINC00167Q96N53 147 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 KRTAP4-7Q9BYR0 210 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 TP73-AS1Q9UF72 201 aa3.42□□□□□ -1.86
SLC8A1-210ENST00000417271 IGLV5-37A0A075B6J1 123 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 IGKV2-28A0A075B6P5 120 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 ZNF815PA8K554 130 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 B5MCH6 92 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 IGKV2D-28P01615 120 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 SOSTDC1Q6X4U4 206 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 PCP2Q8IVA1 136 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 BOD1L2Q8IYS8 172 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 LITAFQ99732 161 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 PLA2G2DQ9UNK4 145 aa3.41□□□□□ -1.86
SLC8A1-210ENST00000417271 TMEM238C9JI98 176 aa3.4□□□□□ -1.87
SLC8A1-210ENST00000417271 IGLV7-43P04211 117 aa3.4□□□□□ -1.87
SLC8A1-210ENST00000417271 FAT1Q14517 4588 aa3.4□□□□□ -1.87
SLC8A1-210ENST00000417271 LBHQ53QV2 105 aaPredicted RBP3.4□□□□□ -1.87
SLC8A1-210ENST00000417271 FLG2Q5D862 2391 aaPredicted RBP3.39□□□□□ -1.87
SLC8A1-210ENST00000417271 SRSF9Q13242 221 aaKnown RBP eCLIP3.39□□□□□ -1.87
SLC8A1-210ENST00000417271 IGLV1-50A0A075B6I6 118 aa3.38□□□□□ -1.87
SLC8A1-210ENST00000417271 LINC00587B1AMM8 73 aa3.38□□□□□ -1.87
SLC8A1-210ENST00000417271 M0R378 163 aa3.38□□□□□ -1.87
SLC8A1-210ENST00000417271 PRLHP81277 87 aa3.38□□□□□ -1.87
SLC8A1-210ENST00000417271 RPL24P83731 157 aaKnown RBP3.38□□□□□ -1.87
SLC8A1-210ENST00000417271 SPINK6Q6UWN8 80 aa3.38□□□□□ -1.87
SLC8A1-210ENST00000417271 SCGB1D4Q6XE38 83 aa3.38□□□□□ -1.87
SLC8A1-210ENST00000417271 LOC107984156A0A0G2JMH3 177 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 TRBV10-3A0A0K0K1G6 114 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 A4D1N5 150 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 KRTAP29-1A8MX34 341 aaPredicted RBP3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 HSBP1L1C9JCN9 74 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 BCE1O60756 84 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 TIMM17BO60830 172 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 ARL17AQ8IVW1 177 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 LINC00308Q8TCZ7 52 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 MIEN1Q9BRT3 115 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 TMEM126AQ9H061 195 aa3.37□□□□□ -1.87
SLC8A1-210ENST00000417271 H0Y9J4 135 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 ZNF861PO60384 105 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 UBE2AP49459 152 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 AKR1D1P51857 326 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 JOSD1Q15040 202 aaPredicted RBP3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 REG3GQ6UW15 175 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 FAM19A1Q7Z5A9 133 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 PAM16Q9Y3D7 125 aa3.36□□□□□ -1.87
SLC8A1-210ENST00000417271 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms