RNA–Protein interactions for RNA: ENST00000416804.1

HLA-DPB1-210, Transcript of major histocompatibility complex, class II, DP beta 1, humanhuman

APPRIS ALT2

Gene HLA-DPB1, Length 1,361 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1-210ENST00000416804 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
HLA-DPB1-210ENST00000416804 PLEKHB2Q96CS7 222 aa8.86□□□□□ -0.99
HLA-DPB1-210ENST00000416804 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
HLA-DPB1-210ENST00000416804 TMEM126AQ9H061 195 aa8.86□□□□□ -0.99
HLA-DPB1-210ENST00000416804 C4orf48Q5BLP8 95 aa8.85□□□□□ -0.99
HLA-DPB1-210ENST00000416804 TSTD3H0UI37 97 aa8.84□□□□□ -0.99
HLA-DPB1-210ENST00000416804 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
HLA-DPB1-210ENST00000416804 GNB1LQ9BYB4 327 aa8.84□□□□□ -0.99
HLA-DPB1-210ENST00000416804 G0S2P27469 103 aa8.83□□□□□ -1
HLA-DPB1-210ENST00000416804 COA6Q5JTJ3 125 aaKnown RBP8.83□□□□□ -1
HLA-DPB1-210ENST00000416804 TMEM238C9JI98 176 aa8.81□□□□□ -1
HLA-DPB1-210ENST00000416804 M0R378 163 aa8.81□□□□□ -1
HLA-DPB1-210ENST00000416804 IGLV5-45A0A087WSX0 123 aa8.8□□□□□ -1
HLA-DPB1-210ENST00000416804 PYY3Q5JQD4 70 aa8.8□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST3H2BBQ8N257 126 aa8.8□□□□□ -1
HLA-DPB1-210ENST00000416804 NXT2Q9NPJ8 142 aaKnown RBP8.8□□□□□ -1
HLA-DPB1-210ENST00000416804 TINCRA0A1B0GVN0 87 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BKO60814 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 ATP5LO75964 103 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BJP06899 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 VPREB1P12018 145 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BOP23527 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BBP33778 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BDP58876 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BCP62807 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST2H2BEQ16778 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BHQ93079 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BNQ99877 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIST1H2BMQ99879 126 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 HIGD2AQ9BW72 106 aa8.79□□□□□ -1
HLA-DPB1-210ENST00000416804 RPL24P83731 157 aaKnown RBP8.78□□□□□ -1
HLA-DPB1-210ENST00000416804 TOMM6Q96B49 74 aa8.78□□□□□ -1
HLA-DPB1-210ENST00000416804 SPRR4Q96PI1 79 aa8.78□□□□□ -1
HLA-DPB1-210ENST00000416804 NDUFA6P56556 154 aa8.77□□□□□ -1.01
HLA-DPB1-210ENST00000416804 ZNF706Q9Y5V0 76 aaPredicted RBP8.77□□□□□ -1.01
HLA-DPB1-210ENST00000416804 SPINK1P00995 79 aa8.76□□□□□ -1.01
HLA-DPB1-210ENST00000416804 SPINK8P0C7L1 97 aa8.76□□□□□ -1.01
HLA-DPB1-210ENST00000416804 DDTP30046 118 aa8.76□□□□□ -1.01
HLA-DPB1-210ENST00000416804 JOSD1Q15040 202 aaPredicted RBP8.76□□□□□ -1.01
HLA-DPB1-210ENST00000416804 ERASQ7Z444 233 aa8.76□□□□□ -1.01
HLA-DPB1-210ENST00000416804 Q8NBF4 154 aa8.76□□□□□ -1.01
HLA-DPB1-210ENST00000416804 ANAPC16Q96DE5 110 aa8.76□□□□□ -1.01
HLA-DPB1-210ENST00000416804 PFN2P35080 140 aa8.75□□□□□ -1.01
HLA-DPB1-210ENST00000416804 DAND5Q8N907 189 aa8.75□□□□□ -1.01
HLA-DPB1-210ENST00000416804 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
HLA-DPB1-210ENST00000416804 SCGB3A1Q96QR1 104 aa8.74□□□□□ -1.01
HLA-DPB1-210ENST00000416804 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
HLA-DPB1-210ENST00000416804 SND1-IT1Q9HBX3 110 aa8.74□□□□□ -1.01
HLA-DPB1-210ENST00000416804 TRAV9-1A0A075B6T8 112 aa8.73□□□□□ -1.01
HLA-DPB1-210ENST00000416804 TRGC2P03986 189 aa8.73□□□□□ -1.01
HLA-DPB1-210ENST00000416804 LCE2CQ5TA81 110 aa8.73□□□□□ -1.01
HLA-DPB1-210ENST00000416804 C14orf144Q96I85 54 aa8.73□□□□□ -1.01
HLA-DPB1-210ENST00000416804 FAM19A2Q8N3H0 131 aa8.73□□□□□ -1.01
HLA-DPB1-210ENST00000416804 HIST1H2BLQ99880 126 aa8.73□□□□□ -1.01
HLA-DPB1-210ENST00000416804 H3BRM9 83 aa8.72□□□□□ -1.01
HLA-DPB1-210ENST00000416804 CFC1BP0CG36 223 aa8.72□□□□□ -1.01
HLA-DPB1-210ENST00000416804 ERG28Q9UKR5 140 aa8.72□□□□□ -1.01
HLA-DPB1-210ENST00000416804 LINC01549A6NIU2 74 aa8.71□□□□□ -1.02
HLA-DPB1-210ENST00000416804 COX17Q14061 63 aa8.71□□□□□ -1.02
HLA-DPB1-210ENST00000416804 XP32Q5T750 250 aa8.71□□□□□ -1.02
HLA-DPB1-210ENST00000416804 CST9LQ9H4G1 147 aa8.71□□□□□ -1.02
HLA-DPB1-210ENST00000416804 FABP4P15090 132 aa8.7□□□□□ -1.02
HLA-DPB1-210ENST00000416804 RPS29P62273 56 aaKnown RBP8.7□□□□□ -1.02
HLA-DPB1-210ENST00000416804 PMVKQ15126 192 aa8.69□□□□□ -1.02
HLA-DPB1-210ENST00000416804 Q8NDZ9 215 aa8.69□□□□□ -1.02
HLA-DPB1-210ENST00000416804 IGLV5-39A0A0G2JS06 123 aa8.68□□□□□ -1.02
HLA-DPB1-210ENST00000416804 MT1HP80294 61 aa8.68□□□□□ -1.02
HLA-DPB1-210ENST00000416804 COX19Q49B96 90 aa8.66□□□□□ -1.02
HLA-DPB1-210ENST00000416804 SLC25A20O43772 301 aa8.65□□□□□ -1.02
HLA-DPB1-210ENST00000416804 KRTAP19-2Q3LHN2 52 aa8.65□□□□□ -1.02
HLA-DPB1-210ENST00000416804 Q8N377 158 aa8.65□□□□□ -1.02
HLA-DPB1-210ENST00000416804 LINC00483Q53H64 154 aa8.64□□□□□ -1.03
HLA-DPB1-210ENST00000416804 SFTA2Q6UW10 78 aa8.64□□□□□ -1.03
HLA-DPB1-210ENST00000416804 PRYO14603 147 aa8.63□□□□□ -1.03
HLA-DPB1-210ENST00000416804 IGLC3P0DOY3 106 aa8.63□□□□□ -1.03
HLA-DPB1-210ENST00000416804 SMCR5Q8TEV8 140 aa8.63□□□□□ -1.03
HLA-DPB1-210ENST00000416804 ZNF625Q96I27 306 aaPredicted RBP8.63□□□□□ -1.03
HLA-DPB1-210ENST00000416804 SSBP3-AS1Q7Z2R9 100 aa8.62□□□□□ -1.03
HLA-DPB1-210ENST00000416804 LINC01546A6NGU7 62 aa8.61□□□□□ -1.03
HLA-DPB1-210ENST00000416804 M0R143 59 aa8.61□□□□□ -1.03
HLA-DPB1-210ENST00000416804 KIAA1644Q3SXP7 199 aa8.61□□□□□ -1.03
HLA-DPB1-210ENST00000416804 ZNF22P17026 224 aaPredicted RBP8.61□□□□□ -1.03
HLA-DPB1-210ENST00000416804 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
HLA-DPB1-210ENST00000416804 SPRR1AP35321 89 aa8.61□□□□□ -1.03
HLA-DPB1-210ENST00000416804 MOBPQ13875 183 aa8.61□□□□□ -1.03
HLA-DPB1-210ENST00000416804 A0A1B0GV90 55 aa8.6□□□□□ -1.03
HLA-DPB1-210ENST00000416804 GAGE2AQ6NT46 116 aa8.6□□□□□ -1.03
HLA-DPB1-210ENST00000416804 IGLV9-49A0A0B4J1Y8 123 aa8.59□□□□□ -1.03
HLA-DPB1-210ENST00000416804 ETDCA0A1B0GVM5 59 aa8.59□□□□□ -1.03
HLA-DPB1-210ENST00000416804 KCNQ1DNQ9H478 68 aa8.59□□□□□ -1.03
HLA-DPB1-210ENST00000416804 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
HLA-DPB1-210ENST00000416804 LINC00158P58513 81 aa8.58□□□□□ -1.04
HLA-DPB1-210ENST00000416804 KRTAP10-6P60371 365 aaPredicted RBP8.58□□□□□ -1.04
HLA-DPB1-210ENST00000416804 TRAPPC1Q9Y5R8 145 aa8.58□□□□□ -1.04
HLA-DPB1-210ENST00000416804 LINC00614P0C842 121 aa8.57□□□□□ -1.04
HLA-DPB1-210ENST00000416804 PRO1933Q9H354 126 aa8.56□□□□□ -1.04
HLA-DPB1-210ENST00000416804 IGLV8-61A0A075B6I0 122 aa8.55□□□□□ -1.04
HLA-DPB1-210ENST00000416804 PCOTHQ58A44 107 aa8.55□□□□□ -1.04
HLA-DPB1-210ENST00000416804 FA2HQ7L5A8 372 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms