RNA–Protein interactions for RNA: ENST00000414407.1

LINC00398-201, long intergenic non-protein coding RNA 398, humanhuman

TSL 2 BASIC

Gene LINC00398, Length 906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00398-201ENST00000414407 SRRM2Q9UQ35 2752 aaKnown RBP10.26□□□□□ -0.77
LINC00398-201ENST00000414407 INAFM2P0DMQ5 153 aa10.25□□□□□ -0.77
LINC00398-201ENST00000414407 IGLV5-37A0A075B6J1 123 aa10.24□□□□□ -0.77
LINC00398-201ENST00000414407 SMIM13P0DJ93 91 aa10.24□□□□□ -0.77
LINC00398-201ENST00000414407 C22orf24Q9Y442 160 aa10.24□□□□□ -0.77
LINC00398-201ENST00000414407 PRR3P79522 188 aaKnown RBP10.23□□□□□ -0.77
LINC00398-201ENST00000414407 LBHQ53QV2 105 aaPredicted RBP10.23□□□□□ -0.77
LINC00398-201ENST00000414407 IGKV2D-26A0A0A0MRZ7 120 aa10.21□□□□□ -0.77
LINC00398-201ENST00000414407 A0A0U1RRA0 63 aa10.21□□□□□ -0.77
LINC00398-201ENST00000414407 RPL24P83731 157 aaKnown RBP10.21□□□□□ -0.77
LINC00398-201ENST00000414407 MIR7-3HGQ8N6C7 128 aa10.21□□□□□ -0.77
LINC00398-201ENST00000414407 UBE2BP63146 152 aa10.2□□□□□ -0.78
LINC00398-201ENST00000414407 MRPL55Q7Z7F7 128 aaKnown RBP10.2□□□□□ -0.78
LINC00398-201ENST00000414407 ATOH7Q8N100 152 aa10.2□□□□□ -0.78
LINC00398-201ENST00000414407 PSORS1C2Q9UIG4 136 aa10.2□□□□□ -0.78
LINC00398-201ENST00000414407 A0A0J9YXY3 114 aa10.19□□□□□ -0.78
LINC00398-201ENST00000414407 VPREB1P12018 145 aa10.19□□□□□ -0.78
LINC00398-201ENST00000414407 NKAPP1Q8N9T2 125 aa10.19□□□□□ -0.78
LINC00398-201ENST00000414407 LOC107984156A0A0G2JMH3 177 aa10.18□□□□□ -0.78
LINC00398-201ENST00000414407 ANKRD39Q53RE8 183 aa10.18□□□□□ -0.78
LINC00398-201ENST00000414407 ARL17AQ8IVW1 177 aa10.18□□□□□ -0.78
LINC00398-201ENST00000414407 ZNF815PA8K554 130 aa10.17□□□□□ -0.78
LINC00398-201ENST00000414407 TIMM17BO60830 172 aa10.17□□□□□ -0.78
LINC00398-201ENST00000414407 KRTAP11-1Q8IUC1 163 aa10.17□□□□□ -0.78
LINC00398-201ENST00000414407 LINC00167Q96N53 147 aa10.17□□□□□ -0.78
LINC00398-201ENST00000414407 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
LINC00398-201ENST00000414407 HSBP1L1C9JCN9 74 aa10.15□□□□□ -0.78
LINC00398-201ENST00000414407 SCGB1D1O95968 90 aa10.15□□□□□ -0.78
LINC00398-201ENST00000414407 C1orf137Q5JT78 98 aa10.15□□□□□ -0.78
LINC00398-201ENST00000414407 BOD1L2Q8IYS8 172 aa10.14□□□□□ -0.79
LINC00398-201ENST00000414407 Q8NDZ9 215 aa10.14□□□□□ -0.79
LINC00398-201ENST00000414407 TTTY13Q9BZ97 58 aa10.14□□□□□ -0.79
LINC00398-201ENST00000414407 SRSF9Q13242 221 aaKnown RBP eCLIP10.13□□□□□ -0.79
LINC00398-201ENST00000414407 SPINK6Q6UWN8 80 aa10.13□□□□□ -0.79
LINC00398-201ENST00000414407 DAND5Q8N907 189 aa10.13□□□□□ -0.79
LINC00398-201ENST00000414407 LITAFQ99732 161 aa10.13□□□□□ -0.79
LINC00398-201ENST00000414407 ADAMTSL4-AS1Q5T5F5 129 aa10.12□□□□□ -0.79
LINC00398-201ENST00000414407 MIEN1Q9BRT3 115 aa10.12□□□□□ -0.79
LINC00398-201ENST00000414407 IGLV1-50A0A075B6I6 118 aa10.11□□□□□ -0.79
LINC00398-201ENST00000414407 GAGE10A6NGK3 116 aa10.11□□□□□ -0.79
LINC00398-201ENST00000414407 RPL37AP8A6NKH3 93 aa10.11□□□□□ -0.79
LINC00398-201ENST00000414407 M0R378 163 aa10.11□□□□□ -0.79
LINC00398-201ENST00000414407 IGLV7-43P04211 117 aa10.11□□□□□ -0.79
LINC00398-201ENST00000414407 NDUFC2O95298 119 aa10.1□□□□□ -0.79
LINC00398-201ENST00000414407 SCGB1D4Q6XE38 83 aa10.1□□□□□ -0.79
LINC00398-201ENST00000414407 PCP2Q8IVA1 136 aa10.1□□□□□ -0.79
LINC00398-201ENST00000414407 TMA7Q9Y2S6 64 aaKnown RBP10.1□□□□□ -0.79
LINC00398-201ENST00000414407 TRBV10-2A0A0K0K1G8 114 aa10.08□□□□□ -0.8
LINC00398-201ENST00000414407 TMEM238C9JI98 176 aa10.08□□□□□ -0.8
LINC00398-201ENST00000414407 JOSD1Q15040 202 aaPredicted RBP10.08□□□□□ -0.8
LINC00398-201ENST00000414407 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
LINC00398-201ENST00000414407 IGKV2-28A0A075B6P5 120 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 BCE1O60756 84 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 OXTP01178 125 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 IGKV2D-28P01615 120 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 SOSTDC1Q6X4U4 206 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 LINC00308Q8TCZ7 52 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 SPANXDQ9BXN6 97 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 SPANXCQ9NY87 97 aa10.07□□□□□ -0.8
LINC00398-201ENST00000414407 MYCBP2O75592 4640 aa10.06□□□□□ -0.8
LINC00398-201ENST00000414407 KRTAP29-1A8MX34 341 aaPredicted RBP10.06□□□□□ -0.8
LINC00398-201ENST00000414407 Q6ZVH6 145 aa10.06□□□□□ -0.8
LINC00398-201ENST00000414407 PPDPFQ9H3Y8 114 aa10.06□□□□□ -0.8
LINC00398-201ENST00000414407 SPANXB1Q9NS25 103 aaPredicted RBP10.06□□□□□ -0.8
LINC00398-201ENST00000414407 PKHD1L1Q86WI1 4243 aa10.06□□□□□ -0.8
LINC00398-201ENST00000414407 NCR3O14931 201 aa10.05□□□□□ -0.8
LINC00398-201ENST00000414407 COPS9Q8WXC6 57 aa10.05□□□□□ -0.8
LINC00398-201ENST00000414407 ZNF861PO60384 105 aa10.04□□□□□ -0.8
LINC00398-201ENST00000414407 EIF4EBP3O60516 100 aaPredicted RBP10.04□□□□□ -0.8
LINC00398-201ENST00000414407 REG3GQ6UW15 175 aa10.04□□□□□ -0.8
LINC00398-201ENST00000414407 DIRC1Q969H9 104 aa10.04□□□□□ -0.8
LINC00398-201ENST00000414407 TMEM126AQ9H061 195 aa10.04□□□□□ -0.8
LINC00398-201ENST00000414407 IFITM1P13164 125 aa10.03□□□□□ -0.8
LINC00398-201ENST00000414407 NPC2P61916 151 aa10.03□□□□□ -0.8
LINC00398-201ENST00000414407 RPL28P46779 137 aaKnown RBP10.02□□□□□ -0.81
LINC00398-201ENST00000414407 KCNQ1DNQ9H478 68 aa10.02□□□□□ -0.81
LINC00398-201ENST00000414407 H0Y9J4 135 aa10.01□□□□□ -0.81
LINC00398-201ENST00000414407 PRYO14603 147 aa10.01□□□□□ -0.81
LINC00398-201ENST00000414407 COX8AP10176 69 aa10.01□□□□□ -0.81
LINC00398-201ENST00000414407 TRBV10-3A0A0K0K1G6 114 aa10□□□□□ -0.81
LINC00398-201ENST00000414407 DLEU1O43261 78 aa10□□□□□ -0.81
LINC00398-201ENST00000414407 DDTP30046 118 aa10□□□□□ -0.81
LINC00398-201ENST00000414407 S100A12P80511 92 aa10□□□□□ -0.81
LINC00398-201ENST00000414407 KRTAP13-1Q8IUC0 172 aa10□□□□□ -0.81
LINC00398-201ENST00000414407 VAMP8Q9BV40 100 aa10□□□□□ -0.81
LINC00398-201ENST00000414407 IGLV6-57P01721 117 aa9.99□□□□□ -0.81
LINC00398-201ENST00000414407 PYY3Q5JQD4 70 aa9.99□□□□□ -0.81
LINC00398-201ENST00000414407 LRP1Q07954 4544 aaKnown RBP9.98□□□□□ -0.81
LINC00398-201ENST00000414407 SPRR1AP35321 89 aa9.98□□□□□ -0.81
LINC00398-201ENST00000414407 UBE2AP49459 152 aa9.98□□□□□ -0.81
LINC00398-201ENST00000414407 SPATA45Q537H7 98 aa9.98□□□□□ -0.81
LINC00398-201ENST00000414407 S100A7L2Q5SY68 101 aa9.98□□□□□ -0.81
LINC00398-201ENST00000414407 LINC00518Q8N0U6 118 aa9.98□□□□□ -0.81
LINC00398-201ENST00000414407 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
LINC00398-201ENST00000414407 PAM16Q9Y3D7 125 aa9.98□□□□□ -0.81
LINC00398-201ENST00000414407 FAT3Q8TDW7 4589 aa9.97□□□□□ -0.81
LINC00398-201ENST00000414407 J3QL48 77 aa9.97□□□□□ -0.81
LINC00398-201ENST00000414407 FAM19A1Q7Z5A9 133 aa9.97□□□□□ -0.81
LINC00398-201ENST00000414407 LINC00337Q8N6G1 96 aa9.97□□□□□ -0.81
LINC00398-201ENST00000414407 CBY1Q9Y3M2 126 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms