RNA–Protein interactions for RNA: ENST00000409870.1

C2orf88-204, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C2orf88, Length 1,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-204ENST00000409870 LINC00587B1AMM8 73 aa16.03■□□□□ 0.16
C2orf88-204ENST00000409870 LINC00158P58513 81 aa16.03■□□□□ 0.16
C2orf88-204ENST00000409870 SND1-IT1Q9HBX3 110 aa16.03■□□□□ 0.16
C2orf88-204ENST00000409870 SMIM13P0DJ93 91 aa16.02■□□□□ 0.16
C2orf88-204ENST00000409870 SERTAD4-AS1Q5TG53 156 aa16.02■□□□□ 0.16
C2orf88-204ENST00000409870 RPL37AP61513 92 aaKnown RBP16.02■□□□□ 0.15
C2orf88-204ENST00000409870 PHF5AQ7RTV0 110 aaKnown RBP16.02■□□□□ 0.15
C2orf88-204ENST00000409870 A0A0U1RRA0 63 aa16.01■□□□□ 0.15
C2orf88-204ENST00000409870 M0QXV9 152 aa16.01■□□□□ 0.15
C2orf88-204ENST00000409870 KRTAP10-4P60372 401 aaPredicted RBP16.01■□□□□ 0.15
C2orf88-204ENST00000409870 ANKRD39Q53RE8 183 aa16.01■□□□□ 0.15
C2orf88-204ENST00000409870 PYY3Q5JQD4 70 aa16.01■□□□□ 0.15
C2orf88-204ENST00000409870 PLA2G2DQ9UNK4 145 aa16.01■□□□□ 0.15
C2orf88-204ENST00000409870 MIR7-3HGQ8N6C7 128 aa15.97■□□□□ 0.15
C2orf88-204ENST00000409870 A0A0J9YXY3 114 aa15.96■□□□□ 0.15
C2orf88-204ENST00000409870 TTTY13Q9BZ97 58 aa15.95■□□□□ 0.14
C2orf88-204ENST00000409870 C22orf24Q9Y442 160 aa15.95■□□□□ 0.14
C2orf88-204ENST00000409870 IGLV5-37A0A075B6J1 123 aa15.94■□□□□ 0.14
C2orf88-204ENST00000409870 ZNF815PA8K554 130 aa15.94■□□□□ 0.14
C2orf88-204ENST00000409870 TP73-AS1Q9UF72 201 aa15.94■□□□□ 0.14
C2orf88-204ENST00000409870 S100A12P80511 92 aa15.94■□□□□ 0.14
C2orf88-204ENST00000409870 PRR3P79522 188 aaKnown RBP15.92■□□□□ 0.14
C2orf88-204ENST00000409870 HSBP1L1C9JCN9 74 aa15.91■□□□□ 0.14
C2orf88-204ENST00000409870 VPREB1P12018 145 aa15.91■□□□□ 0.14
C2orf88-204ENST00000409870 MRPL55Q7Z7F7 128 aaKnown RBP15.91■□□□□ 0.14
C2orf88-204ENST00000409870 C12orf57Q99622 126 aa15.91■□□□□ 0.14
C2orf88-204ENST00000409870 J3QL48 77 aa15.9■□□□□ 0.14
C2orf88-204ENST00000409870 LBHQ53QV2 105 aaPredicted RBP15.9■□□□□ 0.14
C2orf88-204ENST00000409870 LINC00518Q8N0U6 118 aa15.9■□□□□ 0.14
C2orf88-204ENST00000409870 DAND5Q8N907 189 aa15.9■□□□□ 0.14
C2orf88-204ENST00000409870 RPL24P83731 157 aaKnown RBP15.89■□□□□ 0.13
C2orf88-204ENST00000409870 KRTAP11-1Q8IUC1 163 aa15.89■□□□□ 0.13
C2orf88-204ENST00000409870 NKAPP1Q8N9T2 125 aa15.89■□□□□ 0.13
C2orf88-204ENST00000409870 Q8NDZ9 215 aa15.89■□□□□ 0.13
C2orf88-204ENST00000409870 UBE2BP63146 152 aa15.88■□□□□ 0.13
C2orf88-204ENST00000409870 PSORS1C2Q9UIG4 136 aa15.88■□□□□ 0.13
C2orf88-204ENST00000409870 TIMM17BO60830 172 aa15.87■□□□□ 0.13
C2orf88-204ENST00000409870 PCP2Q8IVA1 136 aa15.87■□□□□ 0.13
C2orf88-204ENST00000409870 ADAMTSL4-AS1Q5T5F5 129 aa15.86■□□□□ 0.13
C2orf88-204ENST00000409870 LITAFQ99732 161 aa15.86■□□□□ 0.13
C2orf88-204ENST00000409870 VAMP8Q9BV40 100 aa15.86■□□□□ 0.13
C2orf88-204ENST00000409870 LOC107984156A0A0G2JMH3 177 aa15.85■□□□□ 0.13
C2orf88-204ENST00000409870 ARL17AQ8IVW1 177 aa15.85■□□□□ 0.13
C2orf88-204ENST00000409870 BOD1L2Q8IYS8 172 aa15.85■□□□□ 0.13
C2orf88-204ENST00000409870 LINC00167Q96N53 147 aa15.85■□□□□ 0.13
C2orf88-204ENST00000409870 PKHD1L1Q86WI1 4243 aa15.84■□□□□ 0.13
C2orf88-204ENST00000409870 KRTAP29-1A8MX34 341 aaPredicted RBP15.84■□□□□ 0.13
C2orf88-204ENST00000409870 FAT3Q8TDW7 4589 aa15.83■□□□□ 0.12
C2orf88-204ENST00000409870 LRP1Q07954 4544 aaKnown RBP15.82■□□□□ 0.12
C2orf88-204ENST00000409870 GAGE10A6NGK3 116 aa15.82■□□□□ 0.12
C2orf88-204ENST00000409870 HNRNPA3P51991 378 aaKnown RBP15.82■□□□□ 0.12
C2orf88-204ENST00000409870 SCGB1D4Q6XE38 83 aa15.82■□□□□ 0.12
C2orf88-204ENST00000409870 MIEN1Q9BRT3 115 aa15.82■□□□□ 0.12
C2orf88-204ENST00000409870 C1orf137Q5JT78 98 aa15.79■□□□□ 0.12
C2orf88-204ENST00000409870 SOSTDC1Q6X4U4 206 aa15.79■□□□□ 0.12
C2orf88-204ENST00000409870 RPL37AP8A6NKH3 93 aa15.78■□□□□ 0.12
C2orf88-204ENST00000409870 TMEM238C9JI98 176 aa15.77■□□□□ 0.12
C2orf88-204ENST00000409870 EIF4EBP3O60516 100 aaPredicted RBP15.77■□□□□ 0.12
C2orf88-204ENST00000409870 PAM16Q9Y3D7 125 aa15.77■□□□□ 0.12
C2orf88-204ENST00000409870 NPC2P61916 151 aa15.77■□□□□ 0.11
C2orf88-204ENST00000409870 M0R378 163 aa15.76■□□□□ 0.11
C2orf88-204ENST00000409870 SPATA45Q537H7 98 aa15.76■□□□□ 0.11
C2orf88-204ENST00000409870 LINC00308Q8TCZ7 52 aa15.76■□□□□ 0.11
C2orf88-204ENST00000409870 NCR3O14931 201 aa15.75■□□□□ 0.11
C2orf88-204ENST00000409870 SPANXDQ9BXN6 97 aa15.75■□□□□ 0.11
C2orf88-204ENST00000409870 SPANXCQ9NY87 97 aa15.75■□□□□ 0.11
C2orf88-204ENST00000409870 IGLV1-50A0A075B6I6 118 aa15.74■□□□□ 0.11
C2orf88-204ENST00000409870 IGKV2-28A0A075B6P5 120 aa15.74■□□□□ 0.11
C2orf88-204ENST00000409870 NDUFC2O95298 119 aa15.74■□□□□ 0.11
C2orf88-204ENST00000409870 IGKV2D-28P01615 120 aa15.74■□□□□ 0.11
C2orf88-204ENST00000409870 IGLV7-43P04211 117 aa15.72■□□□□ 0.11
C2orf88-204ENST00000409870 COX8AP10176 69 aa15.71■□□□□ 0.11
C2orf88-204ENST00000409870 SPANXB1Q9NS25 103 aaPredicted RBP15.71■□□□□ 0.11
C2orf88-204ENST00000409870 TRBV10-2A0A0K0K1G8 114 aa15.7■□□□□ 0.1
C2orf88-204ENST00000409870 SRSF9Q13242 221 aaKnown RBP eCLIP15.7■□□□□ 0.1
C2orf88-204ENST00000409870 TSTD3H0UI37 97 aa15.69■□□□□ 0.1
C2orf88-204ENST00000409870 Q6ZVH6 145 aa15.69■□□□□ 0.1
C2orf88-204ENST00000409870 OXTP01178 125 aa15.68■□□□□ 0.1
C2orf88-204ENST00000409870 SPINK6Q6UWN8 80 aa15.68■□□□□ 0.1
C2orf88-204ENST00000409870 BCE1O60756 84 aa15.68■□□□□ 0.1
C2orf88-204ENST00000409870 PPDPFQ9H3Y8 114 aa15.67■□□□□ 0.1
C2orf88-204ENST00000409870 DLEU1O43261 78 aa15.66■□□□□ 0.1
C2orf88-204ENST00000409870 IFITM1P13164 125 aa15.66■□□□□ 0.1
C2orf88-204ENST00000409870 COPS9Q8WXC6 57 aa15.66■□□□□ 0.1
C2orf88-204ENST00000409870 TMEM126AQ9H061 195 aa15.65■□□□□ 0.1
C2orf88-204ENST00000409870 TRBV10-3A0A0K0K1G6 114 aa15.64■□□□□ 0.09
C2orf88-204ENST00000409870 REG3GQ6UW15 175 aa15.64■□□□□ 0.09
C2orf88-204ENST00000409870 C14orf144Q96I85 54 aa15.63■□□□□ 0.09
C2orf88-204ENST00000409870 PRYO14603 147 aa15.61■□□□□ 0.09
C2orf88-204ENST00000409870 UQCR10Q9UDW1 63 aa15.61■□□□□ 0.09
C2orf88-204ENST00000409870 HMCN2Q8NDA2 5059 aa15.61■□□□□ 0.09
C2orf88-204ENST00000409870 DDTP30046 118 aa15.6■□□□□ 0.09
C2orf88-204ENST00000409870 SLC25A34Q6PIV7 304 aa15.6■□□□□ 0.09
C2orf88-204ENST00000409870 MUSTN1Q8IVN3 82 aa15.6■□□□□ 0.09
C2orf88-204ENST00000409870 KCNQ1DNQ9H478 68 aa15.6■□□□□ 0.09
C2orf88-204ENST00000409870 ZNF861PO60384 105 aa15.6■□□□□ 0.09
C2orf88-204ENST00000409870 IGLV6-57P01721 117 aa15.6■□□□□ 0.09
C2orf88-204ENST00000409870 PRO1933Q9H354 126 aa15.6■□□□□ 0.09
C2orf88-204ENST00000409870 S100A7L2Q5SY68 101 aa15.59■□□□□ 0.09
C2orf88-204ENST00000409870 DIRC1Q969H9 104 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms