RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 NCR3O14931 201 aa16.38■□□□□ 0.21
DNMT3A-206ENST00000406659 Q6ZRU5 148 aa16.36■□□□□ 0.21
DNMT3A-206ENST00000406659 Q8NDZ9 215 aa16.36■□□□□ 0.21
DNMT3A-206ENST00000406659 UPK3BQ9BT76 320 aa16.36■□□□□ 0.21
DNMT3A-206ENST00000406659 F8WDY8 70 aa16.36■□□□□ 0.21
DNMT3A-206ENST00000406659 S100A7L2Q5SY68 101 aa16.34■□□□□ 0.21
DNMT3A-206ENST00000406659 TEX49A0A1B0GTD5 131 aa16.33■□□□□ 0.21
DNMT3A-206ENST00000406659 BAALC-AS2P0C853 105 aa16.33■□□□□ 0.2
DNMT3A-206ENST00000406659 RMI2Q96E14 147 aa16.33■□□□□ 0.2
DNMT3A-206ENST00000406659 A0A087WYN8 130 aa16.32■□□□□ 0.2
DNMT3A-206ENST00000406659 XAGE1AQ9HD64 81 aa16.31■□□□□ 0.2
DNMT3A-206ENST00000406659 DNAL4O96015 105 aa16.31■□□□□ 0.2
DNMT3A-206ENST00000406659 SYCNQ0VAF6 134 aa16.29■□□□□ 0.2
DNMT3A-206ENST00000406659 NDUFC2-KCTD14E9PQ53 114 aa16.27■□□□□ 0.2
DNMT3A-206ENST00000406659 RPL18AQ02543 176 aaKnown RBP16.27■□□□□ 0.2
DNMT3A-206ENST00000406659 LECT2O14960 151 aa16.26■□□□□ 0.19
DNMT3A-206ENST00000406659 NHLRC4P0CG21 123 aaPredicted RBP16.24■□□□□ 0.19
DNMT3A-206ENST00000406659 DNAH9Q9NYC9 4486 aa16.24■□□□□ 0.19
DNMT3A-206ENST00000406659 USP17L23D6RBM5 183 aa16.23■□□□□ 0.19
DNMT3A-206ENST00000406659 APLNQ9ULZ1 77 aa16.23■□□□□ 0.19
DNMT3A-206ENST00000406659 COL7A1Q02388 2944 aa16.23■□□□□ 0.19
DNMT3A-206ENST00000406659 IGLV6-57P01721 117 aa16.23■□□□□ 0.19
DNMT3A-206ENST00000406659 SIGMAR1Q99720 223 aa16.23■□□□□ 0.19
DNMT3A-206ENST00000406659 GAGE2EQ4V326 116 aa16.22■□□□□ 0.19
DNMT3A-206ENST00000406659 C6orf99Q4VX62 202 aa16.22■□□□□ 0.19
DNMT3A-206ENST00000406659 CASC10Q5T4H9 136 aa16.22■□□□□ 0.19
DNMT3A-206ENST00000406659 UBE2DNLQ8IWF7 75 aa16.22■□□□□ 0.19
DNMT3A-206ENST00000406659 GAGE2DQ9UEU5 116 aa16.22■□□□□ 0.19
DNMT3A-206ENST00000406659 CDIP1Q9H305 208 aa16.21■□□□□ 0.19
DNMT3A-206ENST00000406659 STAB2Q8WWQ8 2551 aa16.21■□□□□ 0.19
DNMT3A-206ENST00000406659 A0A1B0GX51 115 aa16.2■□□□□ 0.18
DNMT3A-206ENST00000406659 Q6ZRP5 223 aa16.19■□□□□ 0.18
DNMT3A-206ENST00000406659 VPREB1P12018 145 aa16.18■□□□□ 0.18
DNMT3A-206ENST00000406659 C22orf24Q9Y442 160 aa16.18■□□□□ 0.18
DNMT3A-206ENST00000406659 TRBV10-3A0A0K0K1G6 114 aa16.17■□□□□ 0.18
DNMT3A-206ENST00000406659 SNCGO76070 127 aa16.17■□□□□ 0.18
DNMT3A-206ENST00000406659 SLPIP03973 132 aa16.15■□□□□ 0.18
DNMT3A-206ENST00000406659 Q8N814 137 aa16.15■□□□□ 0.18
DNMT3A-206ENST00000406659 M0R378 163 aa16.15■□□□□ 0.18
DNMT3A-206ENST00000406659 ORMDL1Q9P0S3 153 aa16.15■□□□□ 0.18
DNMT3A-206ENST00000406659 LINC00167Q96N53 147 aa16.13■□□□□ 0.17
DNMT3A-206ENST00000406659 TRAV23DV6A0A075B6W5 121 aa16.13■□□□□ 0.17
DNMT3A-206ENST00000406659 PCP4P48539 62 aa16.13■□□□□ 0.17
DNMT3A-206ENST00000406659 NUPR2A6NF83 97 aa16.12■□□□□ 0.17
DNMT3A-206ENST00000406659 TLX1NBP0CAT3 122 aa16.12■□□□□ 0.17
DNMT3A-206ENST00000406659 LINC00575Q6W349 94 aa16.11■□□□□ 0.17
DNMT3A-206ENST00000406659 C9orf129Q5T035 196 aaKnown RBP16.1■□□□□ 0.17
DNMT3A-206ENST00000406659 KRTAP1-5Q9BYS1 174 aa16.1■□□□□ 0.17
DNMT3A-206ENST00000406659 DIRC1Q969H9 104 aa16.1■□□□□ 0.17
DNMT3A-206ENST00000406659 INAFM2P0DMQ5 153 aa16.09■□□□□ 0.17
DNMT3A-206ENST00000406659 DNAH1Q9P2D7 4330 aa16.07■□□□□ 0.16
DNMT3A-206ENST00000406659 FAM240AA0A1B0GVK7 77 aa16.06■□□□□ 0.16
DNMT3A-206ENST00000406659 hADV29S1A0JD25 119 aa16.06■□□□□ 0.16
DNMT3A-206ENST00000406659 ZNF73O43830 326 aaPredicted RBP16.06■□□□□ 0.16
DNMT3A-206ENST00000406659 XGP55808 180 aa16.05■□□□□ 0.16
DNMT3A-206ENST00000406659 PSCAO43653 123 aa16.05■□□□□ 0.16
DNMT3A-206ENST00000406659 NKAPP1Q8N9T2 125 aa16.05■□□□□ 0.16
DNMT3A-206ENST00000406659 DYNC2H1Q8NCM8 4307 aaKnown RBP16.05■□□□□ 0.16
DNMT3A-206ENST00000406659 KRTAP21-3Q3LHN1 58 aa16.03■□□□□ 0.16
DNMT3A-206ENST00000406659 TMEM256-PLSCR3K7ERE1 68 aa16.03■□□□□ 0.16
DNMT3A-206ENST00000406659 MT-ATP8P03928 68 aa16.03■□□□□ 0.16
DNMT3A-206ENST00000406659 COX7BP24311 80 aa16.03■□□□□ 0.16
DNMT3A-206ENST00000406659 TRBV7-6A0A0J9YX20 115 aa16.02■□□□□ 0.15
DNMT3A-206ENST00000406659 ACYP1P07311 99 aa16.01■□□□□ 0.15
DNMT3A-206ENST00000406659 OBSCN-AS1Q96MR7 158 aa16.01■□□□□ 0.15
DNMT3A-206ENST00000406659 PLA2G2DQ9UNK4 145 aa16.01■□□□□ 0.15
DNMT3A-206ENST00000406659 SERTAD4-AS1Q5TG53 156 aa16■□□□□ 0.15
DNMT3A-206ENST00000406659 LOC107984640A0A0U1RRK4 108 aa16■□□□□ 0.15
DNMT3A-206ENST00000406659 GAGE2BQ13066 116 aa16■□□□□ 0.15
DNMT3A-206ENST00000406659 ELOF1P60002 83 aaKnown RBP15.98■□□□□ 0.15
DNMT3A-206ENST00000406659 C14orf132Q9NPU4 83 aa15.98■□□□□ 0.15
DNMT3A-206ENST00000406659 SCGB1A1P11684 91 aa15.97■□□□□ 0.15
DNMT3A-206ENST00000406659 TTC32Q5I0X7 151 aa15.97■□□□□ 0.15
DNMT3A-206ENST00000406659 GAGE2AQ6NT46 116 aa15.95■□□□□ 0.14
DNMT3A-206ENST00000406659 C7orf33Q8WU49 177 aa15.95■□□□□ 0.14
DNMT3A-206ENST00000406659 DNHD1Q96M86 4753 aa15.93■□□□□ 0.14
DNMT3A-206ENST00000406659 IGLV5-37A0A075B6J1 123 aa15.93■□□□□ 0.14
DNMT3A-206ENST00000406659 NBDYA0A0U1RRE5 68 aa15.93■□□□□ 0.14
DNMT3A-206ENST00000406659 JMJD7-PLA2G4BH0Y9G9 81 aa15.93■□□□□ 0.14
DNMT3A-206ENST00000406659 C21orf62-AS1Q17RA5 79 aa15.93■□□□□ 0.14
DNMT3A-206ENST00000406659 A0A1B0GV72 72 aa15.92■□□□□ 0.14
DNMT3A-206ENST00000406659 C14orf177Q52M58 125 aa15.92■□□□□ 0.14
DNMT3A-206ENST00000406659 Q6ZQY7 126 aa15.92■□□□□ 0.14
DNMT3A-206ENST00000406659 FAM168BA1KXE4 195 aa15.92■□□□□ 0.14
DNMT3A-206ENST00000406659 H3BQ85 93 aa15.92■□□□□ 0.14
DNMT3A-206ENST00000406659 KCNQ1DNQ9H478 68 aa15.92■□□□□ 0.14
DNMT3A-206ENST00000406659 CNBPP62633 177 aaKnown RBP15.9■□□□□ 0.14
DNMT3A-206ENST00000406659 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP15.89■□□□□ 0.13
DNMT3A-206ENST00000406659 LINC00528Q8N1L1 170 aa15.88■□□□□ 0.13
DNMT3A-206ENST00000406659 LYSTQ99698 3801 aa15.87■□□□□ 0.13
DNMT3A-206ENST00000406659 CSMD3Q7Z407 3707 aa15.87■□□□□ 0.13
DNMT3A-206ENST00000406659 FAM19A5Q7Z5A7 132 aaPredicted RBP15.86■□□□□ 0.13
DNMT3A-206ENST00000406659 GHRHP01286 108 aa15.85■□□□□ 0.13
DNMT3A-206ENST00000406659 RPL37AP8A6NKH3 93 aa15.85■□□□□ 0.13
DNMT3A-206ENST00000406659 LAMTOR3Q9UHA4 124 aa15.85■□□□□ 0.13
DNMT3A-206ENST00000406659 PRKDCP78527 4128 aaKnown RBP15.85■□□□□ 0.13
DNMT3A-206ENST00000406659 MEGF8Q7Z7M0 2845 aa15.84■□□□□ 0.13
DNMT3A-206ENST00000406659 KRTAP7-1Q8IUC3 87 aa15.84■□□□□ 0.13
DNMT3A-206ENST00000406659 TENM2Q9NT68 2774 aa15.83■□□□□ 0.12
DNMT3A-206ENST00000406659 IGLV1-50A0A075B6I6 118 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms