RNA–Protein interactions for RNA: ENST00000398519.9

CSNK1D-204, Transcript of casein kinase 1 delta, humanhuman

TSL 5 BASIC

Gene CSNK1D, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-204ENST00000398519 C7orf33Q8WU49 177 aa10.84□□□□□ -0.67
CSNK1D-204ENST00000398519 PLA2G2DQ9UNK4 145 aa10.83□□□□□ -0.68
CSNK1D-204ENST00000398519 SRRM2Q9UQ35 2752 aaKnown RBP10.83□□□□□ -0.68
CSNK1D-204ENST00000398519 ABCA13Q86UQ4 5058 aa10.82□□□□□ -0.68
CSNK1D-204ENST00000398519 HSBP1L1C9JCN9 74 aa10.82□□□□□ -0.68
CSNK1D-204ENST00000398519 KRTAP10-4P60372 401 aaPredicted RBP10.82□□□□□ -0.68
CSNK1D-204ENST00000398519 DAND5Q8N907 189 aa10.82□□□□□ -0.68
CSNK1D-204ENST00000398519 PLA2G1BP04054 148 aaKnown RBP10.81□□□□□ -0.68
CSNK1D-204ENST00000398519 RPL37AP61513 92 aaKnown RBP10.81□□□□□ -0.68
CSNK1D-204ENST00000398519 JOSD1Q15040 202 aaPredicted RBP10.81□□□□□ -0.68
CSNK1D-204ENST00000398519 PCP2Q8IVA1 136 aa10.81□□□□□ -0.68
CSNK1D-204ENST00000398519 C22orf24Q9Y442 160 aa10.81□□□□□ -0.68
CSNK1D-204ENST00000398519 Q8NDZ9 215 aa10.8□□□□□ -0.68
CSNK1D-204ENST00000398519 IGLV5-37A0A075B6J1 123 aa10.79□□□□□ -0.68
CSNK1D-204ENST00000398519 ADAMTSL4-AS1Q5T5F5 129 aa10.79□□□□□ -0.68
CSNK1D-204ENST00000398519 VPREB1P12018 145 aa10.78□□□□□ -0.68
CSNK1D-204ENST00000398519 KRTAP11-1Q8IUC1 163 aa10.78□□□□□ -0.68
CSNK1D-204ENST00000398519 LITAFQ99732 161 aa10.78□□□□□ -0.68
CSNK1D-204ENST00000398519 TP73-AS1Q9UF72 201 aa10.78□□□□□ -0.68
CSNK1D-204ENST00000398519 TIMM17BO60830 172 aa10.77□□□□□ -0.69
CSNK1D-204ENST00000398519 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.69
CSNK1D-204ENST00000398519 MRPL55Q7Z7F7 128 aaKnown RBP10.77□□□□□ -0.69
CSNK1D-204ENST00000398519 RPL24P83731 157 aaKnown RBP10.76□□□□□ -0.69
CSNK1D-204ENST00000398519 NKAPP1Q8N9T2 125 aa10.76□□□□□ -0.69
CSNK1D-204ENST00000398519 LOC107984156A0A0G2JMH3 177 aa10.75□□□□□ -0.69
CSNK1D-204ENST00000398519 UBE2BP63146 152 aa10.75□□□□□ -0.69
CSNK1D-204ENST00000398519 LBHQ53QV2 105 aaPredicted RBP10.75□□□□□ -0.69
CSNK1D-204ENST00000398519 PYY3Q5JQD4 70 aa10.75□□□□□ -0.69
CSNK1D-204ENST00000398519 ARL17AQ8IVW1 177 aa10.75□□□□□ -0.69
CSNK1D-204ENST00000398519 BOD1L2Q8IYS8 172 aa10.75□□□□□ -0.69
CSNK1D-204ENST00000398519 SCGB1D4Q6XE38 83 aa10.74□□□□□ -0.69
CSNK1D-204ENST00000398519 LINC00167Q96N53 147 aa10.74□□□□□ -0.69
CSNK1D-204ENST00000398519 PSORS1C2Q9UIG4 136 aa10.74□□□□□ -0.69
CSNK1D-204ENST00000398519 GAGE10A6NGK3 116 aa10.73□□□□□ -0.69
CSNK1D-204ENST00000398519 EIF4EBP3O60516 100 aaPredicted RBP10.73□□□□□ -0.69
CSNK1D-204ENST00000398519 SOSTDC1Q6X4U4 206 aa10.73□□□□□ -0.69
CSNK1D-204ENST00000398519 PCLOQ9Y6V0 5065 aa10.73□□□□□ -0.69
CSNK1D-204ENST00000398519 NPC2P61916 151 aa10.73□□□□□ -0.69
CSNK1D-204ENST00000398519 MIEN1Q9BRT3 115 aa10.72□□□□□ -0.69
CSNK1D-204ENST00000398519 VAMP8Q9BV40 100 aa10.72□□□□□ -0.69
CSNK1D-204ENST00000398519 PAM16Q9Y3D7 125 aa10.72□□□□□ -0.69
CSNK1D-204ENST00000398519 RPL37AP8A6NKH3 93 aa10.71□□□□□ -0.69
CSNK1D-204ENST00000398519 TMEM238C9JI98 176 aa10.7□□□□□ -0.7
CSNK1D-204ENST00000398519 HNRNPA3P51991 378 aaKnown RBP10.7□□□□□ -0.7
CSNK1D-204ENST00000398519 SPATA45Q537H7 98 aa10.7□□□□□ -0.7
CSNK1D-204ENST00000398519 LINC00308Q8TCZ7 52 aa10.7□□□□□ -0.7
CSNK1D-204ENST00000398519 NCR3O14931 201 aa10.69□□□□□ -0.7
CSNK1D-204ENST00000398519 SPANXDQ9BXN6 97 aa10.69□□□□□ -0.7
CSNK1D-204ENST00000398519 SPANXCQ9NY87 97 aa10.69□□□□□ -0.7
CSNK1D-204ENST00000398519 PKHD1L1Q86WI1 4243 aa10.69□□□□□ -0.7
CSNK1D-204ENST00000398519 COX8AP10176 69 aa10.69□□□□□ -0.7
CSNK1D-204ENST00000398519 C1orf137Q5JT78 98 aa10.69□□□□□ -0.7
CSNK1D-204ENST00000398519 IGKV2-28A0A075B6P5 120 aa10.68□□□□□ -0.7
CSNK1D-204ENST00000398519 M0R378 163 aa10.68□□□□□ -0.7
CSNK1D-204ENST00000398519 IGKV2D-28P01615 120 aa10.68□□□□□ -0.7
CSNK1D-204ENST00000398519 INAFM2P0DMQ5 153 aa10.68□□□□□ -0.7
CSNK1D-204ENST00000398519 IGLV1-50A0A075B6I6 118 aa10.67□□□□□ -0.7
CSNK1D-204ENST00000398519 NDUFC2O95298 119 aa10.67□□□□□ -0.7
CSNK1D-204ENST00000398519 C14orf144Q96I85 54 aa10.65□□□□□ -0.7
CSNK1D-204ENST00000398519 DLEU1O43261 78 aa10.65□□□□□ -0.71
CSNK1D-204ENST00000398519 Q6ZVH6 145 aa10.65□□□□□ -0.71
CSNK1D-204ENST00000398519 SPANXB1Q9NS25 103 aaPredicted RBP10.65□□□□□ -0.71
CSNK1D-204ENST00000398519 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
CSNK1D-204ENST00000398519 MYCBP2O75592 4640 aa10.63□□□□□ -0.71
CSNK1D-204ENST00000398519 TRBV10-2A0A0K0K1G8 114 aa10.63□□□□□ -0.71
CSNK1D-204ENST00000398519 IFITM1P13164 125 aa10.62□□□□□ -0.71
CSNK1D-204ENST00000398519 SRSF9Q13242 221 aaKnown RBP eCLIP10.61□□□□□ -0.711e-6■■□□□ 12.6
CSNK1D-204ENST00000398519 MUSTN1Q8IVN3 82 aa10.61□□□□□ -0.71
CSNK1D-204ENST00000398519 PPDPFQ9H3Y8 114 aa10.61□□□□□ -0.71
CSNK1D-204ENST00000398519 TRBV10-3A0A0K0K1G6 114 aa10.6□□□□□ -0.71
CSNK1D-204ENST00000398519 BCE1O60756 84 aa10.6□□□□□ -0.71
CSNK1D-204ENST00000398519 COPS9Q8WXC6 57 aa10.6□□□□□ -0.71
CSNK1D-204ENST00000398519 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
CSNK1D-204ENST00000398519 SLC25A34Q6PIV7 304 aa10.6□□□□□ -0.71
CSNK1D-204ENST00000398519 DDTP30046 118 aa10.59□□□□□ -0.71
CSNK1D-204ENST00000398519 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
CSNK1D-204ENST00000398519 SPINK6Q6UWN8 80 aa10.59□□□□□ -0.71
CSNK1D-204ENST00000398519 FLG2Q5D862 2391 aaPredicted RBP10.59□□□□□ -0.71
CSNK1D-204ENST00000398519 IGLV6-57P01721 117 aa10.58□□□□□ -0.72
CSNK1D-204ENST00000398519 KCNQ1DNQ9H478 68 aa10.58□□□□□ -0.72
CSNK1D-204ENST00000398519 S100A7L2Q5SY68 101 aa10.57□□□□□ -0.72
CSNK1D-204ENST00000398519 LOC105371267A0A1B0GV96 52 aa10.56□□□□□ -0.72
CSNK1D-204ENST00000398519 PRYO14603 147 aa10.56□□□□□ -0.72
CSNK1D-204ENST00000398519 C2orf91Q6ZV80 131 aa10.56□□□□□ -0.72
CSNK1D-204ENST00000398519 ZNF861PO60384 105 aa10.56□□□□□ -0.72
CSNK1D-204ENST00000398519 S100A12P80511 92 aa10.56□□□□□ -0.72
CSNK1D-204ENST00000398519 HIGD1BQ9P298 99 aa10.56□□□□□ -0.72
CSNK1D-204ENST00000398519 KRTAP13-1Q8IUC0 172 aa10.55□□□□□ -0.72
CSNK1D-204ENST00000398519 LINC00518Q8N0U6 118 aa10.55□□□□□ -0.72
CSNK1D-204ENST00000398519 LINC00337Q8N6G1 96 aa10.55□□□□□ -0.72
CSNK1D-204ENST00000398519 LRP1Q07954 4544 aaKnown RBP10.55□□□□□ -0.72
CSNK1D-204ENST00000398519 SPRR1AP35321 89 aa10.54□□□□□ -0.72
CSNK1D-204ENST00000398519 HIST1H4GQ99525 98 aa10.54□□□□□ -0.72
CSNK1D-204ENST00000398519 SMIM6P0DI80 62 aa10.53□□□□□ -0.72
CSNK1D-204ENST00000398519 RPL28P46779 137 aaKnown RBP10.53□□□□□ -0.72
CSNK1D-204ENST00000398519 UBE2AP49459 152 aa10.53□□□□□ -0.72
CSNK1D-204ENST00000398519 FAM19A1Q7Z5A9 133 aa10.53□□□□□ -0.72
CSNK1D-204ENST00000398519 FAT3Q8TDW7 4589 aa10.53□□□□□ -0.72
CSNK1D-204ENST00000398519 PRLHP81277 87 aa10.52□□□□□ -0.72
CSNK1D-204ENST00000398519 OR13C6PQ8NH95 151 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms