RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 COX17Q14061 63 aa11.31□□□□□ -0.6
SLC6A4-202ENST00000394821 TRBV10-2A0A0K0K1G8 114 aa11.31□□□□□ -0.6
SLC6A4-202ENST00000394821 M0QXV9 152 aa11.31□□□□□ -0.6
SLC6A4-202ENST00000394821 UBE2DNLQ8IWF7 75 aa11.31□□□□□ -0.6
SLC6A4-202ENST00000394821 VPS13DQ5THJ4 4388 aa11.31□□□□□ -0.6
SLC6A4-202ENST00000394821 RPL28P46779 137 aaKnown RBP11.3□□□□□ -0.6
SLC6A4-202ENST00000394821 LINC01600Q96MT4 127 aa11.3□□□□□ -0.6
SLC6A4-202ENST00000394821 IGKV2D-24A0A075B6R9 120 aa11.28□□□□□ -0.6
SLC6A4-202ENST00000394821 SMIM11BQ8TCY0 68 aa11.28□□□□□ -0.6
SLC6A4-202ENST00000394821 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
SLC6A4-202ENST00000394821 CASC10Q5T4H9 136 aa11.28□□□□□ -0.6
SLC6A4-202ENST00000394821 FAM218AQ96MZ4 157 aa11.28□□□□□ -0.6
SLC6A4-202ENST00000394821 Q8NDZ9 215 aa11.27□□□□□ -0.6
SLC6A4-202ENST00000394821 NTN5Q8WTR8 489 aaPredicted RBP11.27□□□□□ -0.6
SLC6A4-202ENST00000394821 J3QR89 54 aa11.27□□□□□ -0.61
SLC6A4-202ENST00000394821 PPDPFLQ8WWR9 84 aa11.27□□□□□ -0.61
SLC6A4-202ENST00000394821 MUC7Q8TAX7 377 aa11.26□□□□□ -0.61
SLC6A4-202ENST00000394821 KMT2AQ03164 3969 aa11.26□□□□□ -0.61
SLC6A4-202ENST00000394821 C1orf43Q9BWL3 253 aa11.26□□□□□ -0.61
SLC6A4-202ENST00000394821 HIGD2BQ4VC39 106 aa11.24□□□□□ -0.61
SLC6A4-202ENST00000394821 C6orf48Q9UBA6 75 aa11.24□□□□□ -0.61
SLC6A4-202ENST00000394821 C15orf56Q8N910 161 aa11.24□□□□□ -0.61
SLC6A4-202ENST00000394821 OR13C6PQ8NH95 151 aa11.24□□□□□ -0.61
SLC6A4-202ENST00000394821 GVQW2A0A096LPI5 108 aaPredicted RBP11.23□□□□□ -0.61
SLC6A4-202ENST00000394821 H3BT86 120 aa11.23□□□□□ -0.61
SLC6A4-202ENST00000394821 NDUFC2O95298 119 aa11.23□□□□□ -0.61
SLC6A4-202ENST00000394821 TEX49A0A1B0GTD5 131 aa11.22□□□□□ -0.61
SLC6A4-202ENST00000394821 TRACP01848 142 aa11.21□□□□□ -0.62
SLC6A4-202ENST00000394821 WWC2-AS2Q96NR7 200 aa11.2□□□□□ -0.62
SLC6A4-202ENST00000394821 ZNF561-AS1K7EIQ3 104 aa11.2□□□□□ -0.62
SLC6A4-202ENST00000394821 A0A087WYN8 130 aa11.18□□□□□ -0.62
SLC6A4-202ENST00000394821 LECT2O14960 151 aa11.18□□□□□ -0.62
SLC6A4-202ENST00000394821 M0R2N4 97 aa11.18□□□□□ -0.62
SLC6A4-202ENST00000394821 CAMK2N2Q96S95 79 aa11.18□□□□□ -0.62
SLC6A4-202ENST00000394821 NCR3O14931 201 aa11.17□□□□□ -0.62
SLC6A4-202ENST00000394821 Q6ZRU5 148 aa11.17□□□□□ -0.62
SLC6A4-202ENST00000394821 CDIP1Q9H305 208 aa11.16□□□□□ -0.62
SLC6A4-202ENST00000394821 XAGE1AQ9HD64 81 aa11.16□□□□□ -0.62
SLC6A4-202ENST00000394821 C22orf24Q9Y442 160 aa11.16□□□□□ -0.62
SLC6A4-202ENST00000394821 NBDYA0A0U1RRE5 68 aa11.15□□□□□ -0.62
SLC6A4-202ENST00000394821 H0YGX0 51 aa11.15□□□□□ -0.62
SLC6A4-202ENST00000394821 TMEM126AQ9H061 195 aa11.15□□□□□ -0.62
SLC6A4-202ENST00000394821 DNAH2Q9P225 4427 aa11.14□□□□□ -0.63
SLC6A4-202ENST00000394821 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
SLC6A4-202ENST00000394821 BAALC-AS2P0C853 105 aa11.13□□□□□ -0.63
SLC6A4-202ENST00000394821 USP17L23D6RBM5 183 aa11.13□□□□□ -0.63
SLC6A4-202ENST00000394821 HYDINQ4G0P3 5121 aa11.12□□□□□ -0.63
SLC6A4-202ENST00000394821 SLPIP03973 132 aa11.11□□□□□ -0.63
SLC6A4-202ENST00000394821 RPL18AQ02543 176 aaKnown RBP11.11□□□□□ -0.63
SLC6A4-202ENST00000394821 RMI2Q96E14 147 aa11.1□□□□□ -0.63
SLC6A4-202ENST00000394821 LY6G6CO95867 125 aa11.1□□□□□ -0.63
SLC6A4-202ENST00000394821 IGLV6-57P01721 117 aa11.09□□□□□ -0.63
SLC6A4-202ENST00000394821 S100A7L2Q5SY68 101 aa11.09□□□□□ -0.63
SLC6A4-202ENST00000394821 NDUFC2-KCTD14E9PQ53 114 aa11.09□□□□□ -0.63
SLC6A4-202ENST00000394821 SIGMAR1Q99720 223 aa11.09□□□□□ -0.63
SLC6A4-202ENST00000394821 C6orf99Q4VX62 202 aa11.08□□□□□ -0.64
SLC6A4-202ENST00000394821 DNAL4O96015 105 aa11.07□□□□□ -0.64
SLC6A4-202ENST00000394821 SYCNQ0VAF6 134 aa11.07□□□□□ -0.64
SLC6A4-202ENST00000394821 Q6ZRP5 223 aa11.07□□□□□ -0.64
SLC6A4-202ENST00000394821 Q6ZRN7 208 aaPredicted RBP11.07□□□□□ -0.64
SLC6A4-202ENST00000394821 PSCAO43653 123 aa11.06□□□□□ -0.64
SLC6A4-202ENST00000394821 F8WDY8 70 aa11.06□□□□□ -0.64
SLC6A4-202ENST00000394821 VPREB1P12018 145 aa11.06□□□□□ -0.64
SLC6A4-202ENST00000394821 GAGE2EQ4V326 116 aa11.06□□□□□ -0.64
SLC6A4-202ENST00000394821 TTC32Q5I0X7 151 aa11.06□□□□□ -0.64
SLC6A4-202ENST00000394821 GAGE2DQ9UEU5 116 aa11.06□□□□□ -0.64
SLC6A4-202ENST00000394821 TRBV10-3A0A0K0K1G6 114 aa11.05□□□□□ -0.64
SLC6A4-202ENST00000394821 XGP55808 180 aa11.04□□□□□ -0.64
SLC6A4-202ENST00000394821 C9orf129Q5T035 196 aaKnown RBP11.04□□□□□ -0.64
SLC6A4-202ENST00000394821 LINC00476Q8WZB0 136 aa11.04□□□□□ -0.64
SLC6A4-202ENST00000394821 ALMS1Q8TCU4 4167 aa11.04□□□□□ -0.64
SLC6A4-202ENST00000394821 Q6ZR54 194 aa11.04□□□□□ -0.64
SLC6A4-202ENST00000394821 Q8N814 137 aa11.03□□□□□ -0.64
SLC6A4-202ENST00000394821 LINC00167Q96N53 147 aa11.03□□□□□ -0.64
SLC6A4-202ENST00000394821 C3orf84H3BNL1 204 aa11.02□□□□□ -0.65
SLC6A4-202ENST00000394821 MT-ATP8P03928 68 aa11.01□□□□□ -0.65
SLC6A4-202ENST00000394821 DNAH6Q9C0G6 4158 aa11.01□□□□□ -0.65
SLC6A4-202ENST00000394821 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
SLC6A4-202ENST00000394821 A0A1B0GX51 115 aa11□□□□□ -0.65
SLC6A4-202ENST00000394821 IGLV2-33A0A075B6J2 118 aaPredicted RBP11□□□□□ -0.65
SLC6A4-202ENST00000394821 LINC00575Q6W349 94 aa11□□□□□ -0.65
SLC6A4-202ENST00000394821 TRAV23DV6A0A075B6W5 121 aa10.99□□□□□ -0.65
SLC6A4-202ENST00000394821 ORMDL1Q9P0S3 153 aa10.99□□□□□ -0.65
SLC6A4-202ENST00000394821 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
SLC6A4-202ENST00000394821 FAM240AA0A1B0GVK7 77 aa10.97□□□□□ -0.65
SLC6A4-202ENST00000394821 M0R378 163 aa10.97□□□□□ -0.65
SLC6A4-202ENST00000394821 FUSP35637 526 aaKnown RBP eCLIP10.97□□□□□ -0.65
SLC6A4-202ENST00000394821 OBSCN-AS1Q96MR7 158 aa10.97□□□□□ -0.65
SLC6A4-202ENST00000394821 SACSQ9NZJ4 4579 aa10.97□□□□□ -0.65
SLC6A4-202ENST00000394821 TLX1NBP0CAT3 122 aa10.97□□□□□ -0.65
SLC6A4-202ENST00000394821 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.66
SLC6A4-202ENST00000394821 ZNF73O43830 326 aaPredicted RBP10.96□□□□□ -0.66
SLC6A4-202ENST00000394821 SERTAD4-AS1Q5TG53 156 aa10.96□□□□□ -0.66
SLC6A4-202ENST00000394821 DIRC1Q969H9 104 aa10.94□□□□□ -0.66
SLC6A4-202ENST00000394821 HECTD4Q9Y4D8 3996 aa10.94□□□□□ -0.66
SLC6A4-202ENST00000394821 hADV29S1A0JD25 119 aa10.93□□□□□ -0.66
SLC6A4-202ENST00000394821 INAFM2P0DMQ5 153 aa10.93□□□□□ -0.66
SLC6A4-202ENST00000394821 C14orf132Q9NPU4 83 aa10.93□□□□□ -0.66
SLC6A4-202ENST00000394821 A0A1B0GV72 72 aa10.92□□□□□ -0.66
SLC6A4-202ENST00000394821 FAM168BA1KXE4 195 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms