RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 F8WDY8 70 aa13.37□□□□□ -0.27
PTPN11-202ENST00000392597 C15orf56Q8N910 161 aa13.37□□□□□ -0.27
PTPN11-202ENST00000392597 C6orf48Q9UBA6 75 aa13.37□□□□□ -0.27
PTPN11-202ENST00000392597 IGKV2D-24A0A075B6R9 120 aa13.36□□□□□ -0.27
PTPN11-202ENST00000392597 UPK3BQ9BT76 320 aa13.36□□□□□ -0.27
PTPN11-202ENST00000392597 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
PTPN11-202ENST00000392597 TMEM126AQ9H061 195 aa13.34□□□□□ -0.27
PTPN11-202ENST00000392597 HIGD2BQ4VC39 106 aa13.33□□□□□ -0.27
PTPN11-202ENST00000392597 FAM218AQ96MZ4 157 aa13.33□□□□□ -0.27
PTPN11-202ENST00000392597 PRR3P79522 188 aaKnown RBP13.31□□□□□ -0.28
PTPN11-202ENST00000392597 TGP01266 2768 aa13.29□□□□□ -0.28
PTPN11-202ENST00000392597 Q8NDZ9 215 aa13.29□□□□□ -0.28
PTPN11-202ENST00000392597 Q9HAA7 133 aa13.29□□□□□ -0.28
PTPN11-202ENST00000392597 Q6ZRU5 148 aa13.28□□□□□ -0.28
PTPN11-202ENST00000392597 RMI2Q96E14 147 aa13.28□□□□□ -0.28
PTPN11-202ENST00000392597 TEX49A0A1B0GTD5 131 aa13.27□□□□□ -0.28
PTPN11-202ENST00000392597 NCR3O14931 201 aa13.27□□□□□ -0.29
PTPN11-202ENST00000392597 A0A087WYN8 130 aa13.25□□□□□ -0.29
PTPN11-202ENST00000392597 BAALC-AS2P0C853 105 aa13.25□□□□□ -0.29
PTPN11-202ENST00000392597 S100A7L2Q5SY68 101 aa13.25□□□□□ -0.29
PTPN11-202ENST00000392597 NDUFC2-KCTD14E9PQ53 114 aa13.25□□□□□ -0.29
PTPN11-202ENST00000392597 DNAL4O96015 105 aa13.25□□□□□ -0.29
PTPN11-202ENST00000392597 A0A1B0GX51 115 aa13.24□□□□□ -0.29
PTPN11-202ENST00000392597 SYCNQ0VAF6 134 aa13.23□□□□□ -0.29
PTPN11-202ENST00000392597 IGLV6-57P01721 117 aa13.23□□□□□ -0.29
PTPN11-202ENST00000392597 XAGE1AQ9HD64 81 aa13.22□□□□□ -0.29
PTPN11-202ENST00000392597 LECT2O14960 151 aa13.21□□□□□ -0.3
PTPN11-202ENST00000392597 CDIP1Q9H305 208 aa13.21□□□□□ -0.3
PTPN11-202ENST00000392597 DNAH7Q8WXX0 4024 aa13.2□□□□□ -0.3
PTPN11-202ENST00000392597 RPL18AQ02543 176 aaKnown RBP13.19□□□□□ -0.3
PTPN11-202ENST00000392597 SIGMAR1Q99720 223 aa13.19□□□□□ -0.3
PTPN11-202ENST00000392597 DNAH1Q9P2D7 4330 aa13.19□□□□□ -0.3
PTPN11-202ENST00000392597 APLNQ9ULZ1 77 aa13.19□□□□□ -0.3
PTPN11-202ENST00000392597 DYNC2H1Q8NCM8 4307 aaKnown RBP13.18□□□□□ -0.3
PTPN11-202ENST00000392597 USP17L23D6RBM5 183 aa13.18□□□□□ -0.3
PTPN11-202ENST00000392597 LINC00167Q96N53 147 aa13.18□□□□□ -0.3
PTPN11-202ENST00000392597 C22orf24Q9Y442 160 aa13.18□□□□□ -0.3
PTPN11-202ENST00000392597 VPREB1P12018 145 aa13.17□□□□□ -0.3
PTPN11-202ENST00000392597 C6orf99Q4VX62 202 aa13.17□□□□□ -0.3
PTPN11-202ENST00000392597 TLX1NBP0CAT3 122 aa13.16□□□□□ -0.3
PTPN11-202ENST00000392597 SNCGO76070 127 aa13.15□□□□□ -0.3
PTPN11-202ENST00000392597 Q6ZRP5 223 aa13.15□□□□□ -0.3
PTPN11-202ENST00000392597 FAM240AA0A1B0GVK7 77 aa13.14□□□□□ -0.31
PTPN11-202ENST00000392597 Q8N814 137 aa13.14□□□□□ -0.31
PTPN11-202ENST00000392597 WWC2-AS2Q96NR7 200 aa13.14□□□□□ -0.31
PTPN11-202ENST00000392597 TRBV10-3A0A0K0K1G6 114 aa13.13□□□□□ -0.31
PTPN11-202ENST00000392597 M0R378 163 aa13.13□□□□□ -0.31
PTPN11-202ENST00000392597 CASC10Q5T4H9 136 aa13.13□□□□□ -0.31
PTPN11-202ENST00000392597 ORMDL1Q9P0S3 153 aa13.13□□□□□ -0.31
PTPN11-202ENST00000392597 INAFM2P0DMQ5 153 aa13.12□□□□□ -0.31
PTPN11-202ENST00000392597 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
PTPN11-202ENST00000392597 UBE2DNLQ8IWF7 75 aa13.12□□□□□ -0.31
PTPN11-202ENST00000392597 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
PTPN11-202ENST00000392597 CSMD3Q7Z407 3707 aa13.12□□□□□ -0.31
PTPN11-202ENST00000392597 TRAV23DV6A0A075B6W5 121 aa13.12□□□□□ -0.31
PTPN11-202ENST00000392597 NUPR2A6NF83 97 aa13.11□□□□□ -0.31
PTPN11-202ENST00000392597 LINC00575Q6W349 94 aa13.11□□□□□ -0.31
PTPN11-202ENST00000392597 PCP4P48539 62 aa13.1□□□□□ -0.31
PTPN11-202ENST00000392597 SLPIP03973 132 aa13.1□□□□□ -0.31
PTPN11-202ENST00000392597 DIRC1Q969H9 104 aa13.09□□□□□ -0.31
PTPN11-202ENST00000392597 TRBV7-6A0A0J9YX20 115 aa13.08□□□□□ -0.32
PTPN11-202ENST00000392597 C9orf129Q5T035 196 aaKnown RBP13.08□□□□□ -0.32
PTPN11-202ENST00000392597 OBSCN-AS1Q96MR7 158 aa13.08□□□□□ -0.32
PTPN11-202ENST00000392597 KRTAP1-5Q9BYS1 174 aa13.08□□□□□ -0.32
PTPN11-202ENST00000392597 ACYP1P07311 99 aa13.07□□□□□ -0.32
PTPN11-202ENST00000392597 PLA2G2DQ9UNK4 145 aa13.07□□□□□ -0.32
PTPN11-202ENST00000392597 STARD9Q9P2P6 4700 aa13.07□□□□□ -0.32
PTPN11-202ENST00000392597 ZNF73O43830 326 aaPredicted RBP13.06□□□□□ -0.32
PTPN11-202ENST00000392597 SCGB1A1P11684 91 aa13.06□□□□□ -0.32
PTPN11-202ENST00000392597 XGP55808 180 aa13.06□□□□□ -0.32
PTPN11-202ENST00000392597 hADV29S1A0JD25 119 aa13.05□□□□□ -0.32
PTPN11-202ENST00000392597 TMEM256-PLSCR3K7ERE1 68 aa13.05□□□□□ -0.32
PTPN11-202ENST00000392597 NKAPP1Q8N9T2 125 aa13.02□□□□□ -0.32
PTPN11-202ENST00000392597 H3BQ85 93 aa13.02□□□□□ -0.33
PTPN11-202ENST00000392597 MT-ATP8P03928 68 aa13.02□□□□□ -0.33
PTPN11-202ENST00000392597 COX7BP24311 80 aa13.02□□□□□ -0.33
PTPN11-202ENST00000392597 ELOF1P60002 83 aaKnown RBP13.02□□□□□ -0.33
PTPN11-202ENST00000392597 IGLV5-37A0A075B6J1 123 aa13.01□□□□□ -0.33
PTPN11-202ENST00000392597 TTC32Q5I0X7 151 aa13.01□□□□□ -0.33
PTPN11-202ENST00000392597 LOC107984640A0A0U1RRK4 108 aa13□□□□□ -0.33
PTPN11-202ENST00000392597 LYSTQ99698 3801 aa13□□□□□ -0.33
PTPN11-202ENST00000392597 PLECQ15149 4684 aaKnown RBP12.99□□□□□ -0.33
PTPN11-202ENST00000392597 JMJD7-PLA2G4BH0Y9G9 81 aa12.99□□□□□ -0.33
PTPN11-202ENST00000392597 PSCAO43653 123 aa12.99□□□□□ -0.33
PTPN11-202ENST00000392597 SERTAD4-AS1Q5TG53 156 aa12.99□□□□□ -0.33
PTPN11-202ENST00000392597 C3orf84H3BNL1 204 aa12.98□□□□□ -0.33
PTPN11-202ENST00000392597 KCNQ1DNQ9H478 68 aa12.98□□□□□ -0.33
PTPN11-202ENST00000392597 CNBPP62633 177 aaKnown RBP12.97□□□□□ -0.33
PTPN11-202ENST00000392597 C14orf177Q52M58 125 aa12.97□□□□□ -0.33
PTPN11-202ENST00000392597 TENM2Q9NT68 2774 aa12.97□□□□□ -0.33
PTPN11-202ENST00000392597 C7orf33Q8WU49 177 aa12.96□□□□□ -0.33
PTPN11-202ENST00000392597 C14orf132Q9NPU4 83 aa12.96□□□□□ -0.33
PTPN11-202ENST00000392597 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.95□□□□□ -0.34
PTPN11-202ENST00000392597 NBDYA0A0U1RRE5 68 aa12.95□□□□□ -0.34
PTPN11-202ENST00000392597 GHRHP01286 108 aa12.94□□□□□ -0.34
PTPN11-202ENST00000392597 GAGE2BQ13066 116 aa12.94□□□□□ -0.34
PTPN11-202ENST00000392597 GAGE2AQ6NT46 116 aa12.93□□□□□ -0.34
PTPN11-202ENST00000392597 Q6ZQY7 126 aa12.93□□□□□ -0.34
PTPN11-202ENST00000392597 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
PTPN11-202ENST00000392597 SDIM1Q6ZPB5 146 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms